RNA–Protein interactions for RNA: ENST00000480209.1

NUDCD3-208, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 488 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-208ENST00000480209 SND1-IT1Q9HBX3 110 aa5.72□□□□□ -1.49
NUDCD3-208ENST00000480209 GAGE2DQ9UEU5 116 aa5.72□□□□□ -1.49
NUDCD3-208ENST00000480209 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.72□□□□□ -1.49
NUDCD3-208ENST00000480209 IGKV2-24A0A0C4DH68 120 aa5.71□□□□□ -1.5
NUDCD3-208ENST00000480209 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.5
NUDCD3-208ENST00000480209 TIMM17BO60830 172 aa5.71□□□□□ -1.5
NUDCD3-208ENST00000480209 PTTG1IPP53801 180 aa5.71□□□□□ -1.5
NUDCD3-208ENST00000480209 NPC2P61916 151 aa5.71□□□□□ -1.5
NUDCD3-208ENST00000480209 COX17Q14061 63 aa5.71□□□□□ -1.5
NUDCD3-208ENST00000480209 KRTAP7-1Q8IUC3 87 aa5.71□□□□□ -1.5
NUDCD3-208ENST00000480209 SPANXDQ9BXN6 97 aa5.71□□□□□ -1.5
NUDCD3-208ENST00000480209 KRTAP4-6Q9BYQ5 205 aa5.71□□□□□ -1.5
NUDCD3-208ENST00000480209 XAGE1AQ9HD64 81 aa5.71□□□□□ -1.5
NUDCD3-208ENST00000480209 SPANXCQ9NY87 97 aa5.71□□□□□ -1.5
NUDCD3-208ENST00000480209 UQCR10Q9UDW1 63 aa5.71□□□□□ -1.5
NUDCD3-208ENST00000480209 FAM168BA1KXE4 195 aa5.7□□□□□ -1.5
NUDCD3-208ENST00000480209 C16orf90A8MZG2 172 aa5.7□□□□□ -1.5
NUDCD3-208ENST00000480209 GCSHP23434 173 aa5.7□□□□□ -1.5
NUDCD3-208ENST00000480209 CIRBPQ14011 172 aaKnown RBP5.7□□□□□ -1.5
NUDCD3-208ENST00000480209 SPACA4Q8TDM5 124 aa5.7□□□□□ -1.5
NUDCD3-208ENST00000480209 SPANXB1Q9NS25 103 aaPredicted RBP5.7□□□□□ -1.5
NUDCD3-208ENST00000480209 FAM30AQ9NZY2 134 aa5.7□□□□□ -1.5
NUDCD3-208ENST00000480209 HIGD1BQ9P298 99 aa5.7□□□□□ -1.5
NUDCD3-208ENST00000480209 TMEM238C9JI98 176 aa5.69□□□□□ -1.5
NUDCD3-208ENST00000480209 HAMPP81172 84 aa5.69□□□□□ -1.5
NUDCD3-208ENST00000480209 SERTAD4-AS1Q5TG53 156 aa5.69□□□□□ -1.5
NUDCD3-208ENST00000480209 Q6ZSA8 131 aa5.69□□□□□ -1.5
NUDCD3-208ENST00000480209 SVIPQ8NHG7 77 aa5.69□□□□□ -1.5
NUDCD3-208ENST00000480209 MIEN1Q9BRT3 115 aa5.69□□□□□ -1.5
NUDCD3-208ENST00000480209 A0A1W2PNN7 141 aa5.68□□□□□ -1.5
NUDCD3-208ENST00000480209 HNRNPA3P51991 378 aaKnown RBP5.68□□□□□ -1.5
NUDCD3-208ENST00000480209 LINC00308Q8TCZ7 52 aa5.68□□□□□ -1.5
NUDCD3-208ENST00000480209 LOC107984156A0A0G2JMH3 177 aa5.67□□□□□ -1.5
NUDCD3-208ENST00000480209 LINC00587B1AMM8 73 aa5.67□□□□□ -1.5
NUDCD3-208ENST00000480209 TSTD3H0UI37 97 aa5.67□□□□□ -1.5
NUDCD3-208ENST00000480209 VPREB1P12018 145 aa5.67□□□□□ -1.5
NUDCD3-208ENST00000480209 MUSTN1Q8IVN3 82 aa5.67□□□□□ -1.5
NUDCD3-208ENST00000480209 ARL17AQ8IVW1 177 aa5.67□□□□□ -1.5
NUDCD3-208ENST00000480209 PRR3P79522 188 aaKnown RBP5.66□□□□□ -1.5
NUDCD3-208ENST00000480209 FAM19A5Q7Z5A7 132 aaPredicted RBP5.66□□□□□ -1.5
NUDCD3-208ENST00000480209 HSPG2P98160 4391 aa5.66□□□□□ -1.5
NUDCD3-208ENST00000480209 FXYD2P54710 66 aa5.65□□□□□ -1.5
NUDCD3-208ENST00000480209 SRSF9Q13242 221 aaKnown RBP eCLIP5.65□□□□□ -1.5
NUDCD3-208ENST00000480209 SCXQ7RTU7 201 aa5.65□□□□□ -1.5
NUDCD3-208ENST00000480209 HIST1H4GQ99525 98 aa5.65□□□□□ -1.5
NUDCD3-208ENST00000480209 PKIGQ9Y2B9 76 aa5.65□□□□□ -1.5
NUDCD3-208ENST00000480209 IGKV2-28A0A075B6P5 120 aa5.64□□□□□ -1.51
NUDCD3-208ENST00000480209 A0A087WYN8 130 aa5.64□□□□□ -1.51
NUDCD3-208ENST00000480209 NCR3O14931 201 aa5.64□□□□□ -1.51
NUDCD3-208ENST00000480209 IGKV2D-28P01615 120 aa5.64□□□□□ -1.51
NUDCD3-208ENST00000480209 IFITM1P13164 125 aa5.64□□□□□ -1.51
NUDCD3-208ENST00000480209 DDTP30046 118 aa5.64□□□□□ -1.51
NUDCD3-208ENST00000480209 HSD52Q0P140 79 aa5.64□□□□□ -1.51
NUDCD3-208ENST00000480209 Q6ZVH6 145 aa5.64□□□□□ -1.51
NUDCD3-208ENST00000480209 PLAC8Q9NZF1 115 aa5.64□□□□□ -1.51
NUDCD3-208ENST00000480209 PLA2G2DQ9UNK4 145 aa5.64□□□□□ -1.51
NUDCD3-208ENST00000480209 IGLV5-37A0A075B6J1 123 aa5.63□□□□□ -1.51
NUDCD3-208ENST00000480209 A4D1N5 150 aa5.63□□□□□ -1.51
NUDCD3-208ENST00000480209 EPM2AB3EWF7 344 aa5.63□□□□□ -1.51
NUDCD3-208ENST00000480209 CTAG1AP78358 180 aa5.63□□□□□ -1.51
NUDCD3-208ENST00000480209 TAL2Q16559 108 aa5.63□□□□□ -1.51
NUDCD3-208ENST00000480209 KRTAP11-1Q8IUC1 163 aa5.63□□□□□ -1.51
NUDCD3-208ENST00000480209 CEND1Q8N111 149 aa5.63□□□□□ -1.51
NUDCD3-208ENST00000480209 CIRBP-AS1Q8TBR5 109 aa5.63□□□□□ -1.51
NUDCD3-208ENST00000480209 PPDPFQ9H3Y8 114 aa5.63□□□□□ -1.51
NUDCD3-208ENST00000480209 M0QXV9 152 aa5.62□□□□□ -1.51
NUDCD3-208ENST00000480209 XGP55808 180 aa5.62□□□□□ -1.51
NUDCD3-208ENST00000480209 PHF5AQ7RTV0 110 aaKnown RBP5.62□□□□□ -1.51
NUDCD3-208ENST00000480209 LINC00337Q8N6G1 96 aa5.62□□□□□ -1.51
NUDCD3-208ENST00000480209 C7orf33Q8WU49 177 aa5.62□□□□□ -1.51
NUDCD3-208ENST00000480209 LINC00474Q9P2X8 69 aa5.62□□□□□ -1.51
NUDCD3-208ENST00000480209 GAGE10A6NGK3 116 aa5.61□□□□□ -1.51
NUDCD3-208ENST00000480209 PCP4L1A6NKN8 68 aa5.61□□□□□ -1.51
NUDCD3-208ENST00000480209 NDUFC2O95298 119 aa5.61□□□□□ -1.51
NUDCD3-208ENST00000480209 HINT1P49773 126 aaPredicted RBP5.61□□□□□ -1.51
NUDCD3-208ENST00000480209 BVES-AS1Q5T3Y7 98 aa5.61□□□□□ -1.51
NUDCD3-208ENST00000480209 C22orf24Q9Y442 160 aa5.61□□□□□ -1.51
NUDCD3-208ENST00000480209 KIAA1109Q2LD37 5005 aa5.6□□□□□ -1.51
NUDCD3-208ENST00000480209 K7ERJ3 54 aa5.6□□□□□ -1.51
NUDCD3-208ENST00000480209 RPL24P83731 157 aaKnown RBP5.6□□□□□ -1.51
NUDCD3-208ENST00000480209 TRBV10-3A0A0K0K1G6 114 aa5.59□□□□□ -1.51
NUDCD3-208ENST00000480209 TRBV10-2A0A0K0K1G8 114 aa5.59□□□□□ -1.51
NUDCD3-208ENST00000480209 CFC1BP0CG36 223 aa5.59□□□□□ -1.51
NUDCD3-208ENST00000480209 CFC1P0CG37 223 aa5.59□□□□□ -1.51
NUDCD3-208ENST00000480209 MRPL55Q7Z7F7 128 aaKnown RBP5.59□□□□□ -1.51
NUDCD3-208ENST00000480209 NKAPP1Q8N9T2 125 aa5.59□□□□□ -1.51
NUDCD3-208ENST00000480209 LINC00167Q96N53 147 aa5.59□□□□□ -1.51
NUDCD3-208ENST00000480209 KRTAP17-1Q9BYP8 105 aa5.59□□□□□ -1.51
NUDCD3-208ENST00000480209 RYR1P21817 5038 aa5.59□□□□□ -1.52
NUDCD3-208ENST00000480209 FAT1Q14517 4588 aa5.58□□□□□ -1.52
NUDCD3-208ENST00000480209 VPS13BQ7Z7G8 4022 aa5.58□□□□□ -1.52
NUDCD3-208ENST00000480209 RPL37AP8A6NKH3 93 aa5.58□□□□□ -1.52
NUDCD3-208ENST00000480209 M0R378 163 aa5.58□□□□□ -1.52
NUDCD3-208ENST00000480209 IGLV6-57P01721 117 aa5.58□□□□□ -1.52
NUDCD3-208ENST00000480209 COPS9Q8WXC6 57 aa5.58□□□□□ -1.52
NUDCD3-208ENST00000480209 DPH3Q96FX2 82 aa5.58□□□□□ -1.52
NUDCD3-208ENST00000480209 NHP2Q9NX24 153 aaKnown RBP5.58□□□□□ -1.52
NUDCD3-208ENST00000480209 A0A1B0GWB2 263 aa5.57□□□□□ -1.52
NUDCD3-208ENST00000480209 IGLV1-50A0A075B6I6 118 aa5.56□□□□□ -1.52
NUDCD3-208ENST00000480209 A0A0B4J2C4 111 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms