RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 FAM168BA1KXE4 195 aa7.08□□□□□ -1.28
CLDN11-205ENST00000480067 TIMM17BO60830 172 aa7.08□□□□□ -1.28
CLDN11-205ENST00000480067 COX8AP10176 69 aa7.08□□□□□ -1.28
CLDN11-205ENST00000480067 ADAMTSL4-AS1Q5T5F5 129 aa7.08□□□□□ -1.28
CLDN11-205ENST00000480067 C14orf144Q96I85 54 aa7.08□□□□□ -1.28
CLDN11-205ENST00000480067 PLAC8Q9NZF1 115 aa7.08□□□□□ -1.28
CLDN11-205ENST00000480067 BIRC6Q9NR09 4857 aa7.08□□□□□ -1.28
CLDN11-205ENST00000480067 BOD1L2Q8IYS8 172 aa7.08□□□□□ -1.28
CLDN11-205ENST00000480067 MIEN1Q9BRT3 115 aa7.08□□□□□ -1.28
CLDN11-205ENST00000480067 TMEM238C9JI98 176 aa7.07□□□□□ -1.28
CLDN11-205ENST00000480067 FAM19A5Q7Z5A7 132 aaPredicted RBP7.07□□□□□ -1.28
CLDN11-205ENST00000480067 KIAA1109Q2LD37 5005 aa7.07□□□□□ -1.28
CLDN11-205ENST00000480067 DLEU1O43261 78 aa7.06□□□□□ -1.28
CLDN11-205ENST00000480067 SMIM6P0DI80 62 aa7.06□□□□□ -1.28
CLDN11-205ENST00000480067 RPL24P83731 157 aaKnown RBP7.06□□□□□ -1.28
CLDN11-205ENST00000480067 LITAFQ99732 161 aa7.06□□□□□ -1.28
CLDN11-205ENST00000480067 SERTAD4-AS1Q5TG53 156 aa7.05□□□□□ -1.28
CLDN11-205ENST00000480067 SLC25A34Q6PIV7 304 aa7.05□□□□□ -1.28
CLDN11-205ENST00000480067 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
CLDN11-205ENST00000480067 EPM2AB3EWF7 344 aa7.04□□□□□ -1.28
CLDN11-205ENST00000480067 NPC2P61916 151 aa7.04□□□□□ -1.28
CLDN11-205ENST00000480067 NKAPP1Q8N9T2 125 aa7.04□□□□□ -1.28
CLDN11-205ENST00000480067 LOC107984156A0A0G2JMH3 177 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 M0QXV9 152 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 SMR3BP02814 79 aaPredicted RBP7.03□□□□□ -1.28
CLDN11-205ENST00000480067 SRSF9Q13242 221 aaKnown RBP eCLIP7.03□□□□□ -1.28
CLDN11-205ENST00000480067 Q6ZVH6 145 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 KRTAP7-1Q8IUC3 87 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 ARL17AQ8IVW1 177 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 LINC00308Q8TCZ7 52 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 COPS9Q8WXC6 57 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 TP73-AS1Q9UF72 201 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 C22orf24Q9Y442 160 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 RYR1P21817 5038 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 HSPG2P98160 4391 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 LBHQ53QV2 105 aaPredicted RBP7.03□□□□□ -1.28
CLDN11-205ENST00000480067 LCE2CQ5TA81 110 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 PHF5AQ7RTV0 110 aaKnown RBP7.03□□□□□ -1.28
CLDN11-205ENST00000480067 C7orf33Q8WU49 177 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 SPANXDQ9BXN6 97 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 SPANXCQ9NY87 97 aa7.03□□□□□ -1.28
CLDN11-205ENST00000480067 FAT1Q14517 4588 aa7.02□□□□□ -1.29
CLDN11-205ENST00000480067 VPREB1P12018 145 aa7.02□□□□□ -1.29
CLDN11-205ENST00000480067 IGLV5-37A0A075B6J1 123 aa7.01□□□□□ -1.29
CLDN11-205ENST00000480067 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
CLDN11-205ENST00000480067 IFITM1P13164 125 aa7.01□□□□□ -1.29
CLDN11-205ENST00000480067 PRR3P79522 188 aaKnown RBP7.01□□□□□ -1.29
CLDN11-205ENST00000480067 SOSTDC1Q6X4U4 206 aa7.01□□□□□ -1.29
CLDN11-205ENST00000480067 MRPL55Q7Z7F7 128 aaKnown RBP7.01□□□□□ -1.29
CLDN11-205ENST00000480067 Q8NDZ9 215 aa7.01□□□□□ -1.29
CLDN11-205ENST00000480067 UBE2BP63146 152 aa7□□□□□ -1.29
CLDN11-205ENST00000480067 MUSTN1Q8IVN3 82 aa7□□□□□ -1.29
CLDN11-205ENST00000480067 HIST1H4GQ99525 98 aa7□□□□□ -1.29
CLDN11-205ENST00000480067 SPANXB1Q9NS25 103 aaPredicted RBP7□□□□□ -1.29
CLDN11-205ENST00000480067 GAGE10A6NGK3 116 aa6.99□□□□□ -1.29
CLDN11-205ENST00000480067 FAM229AH3BQW9 127 aa6.99□□□□□ -1.29
CLDN11-205ENST00000480067 NDUFC2O95298 119 aa6.99□□□□□ -1.29
CLDN11-205ENST00000480067 C12orf57Q99622 126 aa6.99□□□□□ -1.29
CLDN11-205ENST00000480067 HIGD1BQ9P298 99 aa6.99□□□□□ -1.29
CLDN11-205ENST00000480067 UQCR10Q9UDW1 63 aa6.99□□□□□ -1.29
CLDN11-205ENST00000480067 M0R378 163 aa6.99□□□□□ -1.29
CLDN11-205ENST00000480067 NCR3O14931 201 aa6.99□□□□□ -1.29
CLDN11-205ENST00000480067 LINC00167Q96N53 147 aa6.99□□□□□ -1.29
CLDN11-205ENST00000480067 RPL37AP8A6NKH3 93 aa6.98□□□□□ -1.29
CLDN11-205ENST00000480067 C2orf91Q6ZV80 131 aa6.98□□□□□ -1.29
CLDN11-205ENST00000480067 PPDPFQ9H3Y8 114 aa6.98□□□□□ -1.29
CLDN11-205ENST00000480067 SRRM2Q9UQ35 2752 aaKnown RBP6.97□□□□□ -1.29
CLDN11-205ENST00000480067 PRO1933Q9H354 126 aa6.97□□□□□ -1.29
CLDN11-205ENST00000480067 IGKV2-28A0A075B6P5 120 aa6.96□□□□□ -1.29
CLDN11-205ENST00000480067 TRBV10-2A0A0K0K1G8 114 aa6.96□□□□□ -1.29
CLDN11-205ENST00000480067 IGKV2D-28P01615 120 aa6.96□□□□□ -1.29
CLDN11-205ENST00000480067 LINC00518Q8N0U6 118 aa6.96□□□□□ -1.29
CLDN11-205ENST00000480067 Q8N1X5 172 aa6.96□□□□□ -1.29
CLDN11-205ENST00000480067 IGLV1-50A0A075B6I6 118 aa6.95□□□□□ -1.3
CLDN11-205ENST00000480067 PLA2G1BP04054 148 aaKnown RBP6.95□□□□□ -1.3
CLDN11-205ENST00000480067 RPL37AP61513 92 aaKnown RBP6.95□□□□□ -1.3
CLDN11-205ENST00000480067 S100A7L2Q5SY68 101 aa6.95□□□□□ -1.3
CLDN11-205ENST00000480067 VPS13BQ7Z7G8 4022 aa6.95□□□□□ -1.3
CLDN11-205ENST00000480067 TAL2Q16559 108 aa6.95□□□□□ -1.3
CLDN11-205ENST00000480067 Q5VSD8 79 aa6.95□□□□□ -1.3
CLDN11-205ENST00000480067 KRTAP11-1Q8IUC1 163 aa6.95□□□□□ -1.3
CLDN11-205ENST00000480067 PSORS1C2Q9UIG4 136 aa6.95□□□□□ -1.3
CLDN11-205ENST00000480067 TSTD3H0UI37 97 aa6.94□□□□□ -1.3
CLDN11-205ENST00000480067 DDTP30046 118 aa6.94□□□□□ -1.3
CLDN11-205ENST00000480067 HNRNPA3P51991 378 aaKnown RBP6.94□□□□□ -1.3
CLDN11-205ENST00000480067 OR13C6PQ8NH95 151 aa6.94□□□□□ -1.3
CLDN11-205ENST00000480067 TRBV10-3A0A0K0K1G6 114 aa6.93□□□□□ -1.3
CLDN11-205ENST00000480067 A4D1N5 150 aa6.93□□□□□ -1.3
CLDN11-205ENST00000480067 C1orf137Q5JT78 98 aa6.93□□□□□ -1.3
CLDN11-205ENST00000480067 HERC2O95714 4834 aa6.93□□□□□ -1.3
CLDN11-205ENST00000480067 A6NDN8 102 aa6.92□□□□□ -1.3
CLDN11-205ENST00000480067 CEND1Q8N111 149 aa6.92□□□□□ -1.3
CLDN11-205ENST00000480067 TMEM126AQ9H061 195 aa6.92□□□□□ -1.3
CLDN11-205ENST00000480067 IGLV6-57P01721 117 aa6.91□□□□□ -1.3
CLDN11-205ENST00000480067 HSD52Q0P140 79 aa6.91□□□□□ -1.3
CLDN11-205ENST00000480067 REG3GQ6UW15 175 aa6.91□□□□□ -1.3
CLDN11-205ENST00000480067 TRAV13-2A0A0B4J235 113 aa6.91□□□□□ -1.3
CLDN11-205ENST00000480067 LINC00337Q8N6G1 96 aa6.91□□□□□ -1.3
CLDN11-205ENST00000480067 KRTAP17-1Q9BYP8 105 aa6.91□□□□□ -1.3
CLDN11-205ENST00000480067 KCNQ1DNQ9H478 68 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms