RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197		A0A0U1RRA0	63 aa		11.22	□□□□□ -0.61
RFK-204	ENST00000479197	SMIM13	P0DJ93	91 aa		11.22	□□□□□ -0.61
RFK-204	ENST00000479197	PCLO	Q9Y6V0	5065 aa		11.22	□□□□□ -0.61
RFK-204	ENST00000479197	PLA2G2D	Q9UNK4	145 aa		11.21	□□□□□ -0.61
RFK-204	ENST00000479197	IGKV2D-26	A0A0A0MRZ7	120 aa		11.2	□□□□□ -0.62
RFK-204	ENST00000479197	C22orf24	Q9Y442	160 aa		11.19	□□□□□ -0.62
RFK-204	ENST00000479197	MIR7-3HG	Q8N6C7	128 aa		11.19	□□□□□ -0.62
RFK-204	ENST00000479197	PRR3	P79522	188 aa	Known RBP	11.18	□□□□□ -0.62
RFK-204	ENST00000479197	ANKRD39	Q53RE8	183 aa		11.18	□□□□□ -0.62
RFK-204	ENST00000479197	TP73-AS1	Q9UF72	201 aa		11.18	□□□□□ -0.62
RFK-204	ENST00000479197	INAFM2	P0DMQ5	153 aa		11.17	□□□□□ -0.62
RFK-204	ENST00000479197	TMA7	Q9Y2S6	64 aa	Known RBP	11.17	□□□□□ -0.62
RFK-204	ENST00000479197	IGLV5-37	A0A075B6J1	123 aa		11.16	□□□□□ -0.62
RFK-204	ENST00000479197		A0A0J9YXY3	114 aa		11.16	□□□□□ -0.62
RFK-204	ENST00000479197	UBE2B	P63146	152 aa		11.16	□□□□□ -0.62
RFK-204	ENST00000479197	LBH	Q53QV2	105 aa	Predicted RBP	11.16	□□□□□ -0.62
RFK-204	ENST00000479197	ZNF815P	A8K554	130 aa		11.15	□□□□□ -0.62
RFK-204	ENST00000479197	MRPL55	Q7Z7F7	128 aa	Known RBP	11.15	□□□□□ -0.62
RFK-204	ENST00000479197	NKAPP1	Q8N9T2	125 aa		11.15	□□□□□ -0.62
RFK-204	ENST00000479197	TTTY13	Q9BZ97	58 aa		11.15	□□□□□ -0.62
RFK-204	ENST00000479197	PSORS1C2	Q9UIG4	136 aa		11.15	□□□□□ -0.62
RFK-204	ENST00000479197	SCGB1D1	O95968	90 aa		11.14	□□□□□ -0.63
RFK-204	ENST00000479197	RPL24	P83731	157 aa	Known RBP	11.14	□□□□□ -0.63
RFK-204	ENST00000479197	PKHD1L1	Q86WI1	4243 aa		11.14	□□□□□ -0.63
RFK-204	ENST00000479197	VPREB1	P12018	145 aa		11.14	□□□□□ -0.63
RFK-204	ENST00000479197	KRTAP11-1	Q8IUC1	163 aa		11.14	□□□□□ -0.63
RFK-204	ENST00000479197	DAND5	Q8N907	189 aa		11.14	□□□□□ -0.63
RFK-204	ENST00000479197	HSBP1L1	C9JCN9	74 aa		11.13	□□□□□ -0.63
RFK-204	ENST00000479197	HNRNPA3	P51991	378 aa	Known RBP	11.12	□□□□□ -0.63
RFK-204	ENST00000479197		Q8NDZ9	215 aa		11.12	□□□□□ -0.63
RFK-204	ENST00000479197	BOD1L2	Q8IYS8	172 aa		11.11	□□□□□ -0.63
RFK-204	ENST00000479197	LINC00167	Q96N53	147 aa		11.11	□□□□□ -0.63
RFK-204	ENST00000479197	C1orf137	Q5JT78	98 aa		11.1	□□□□□ -0.63
RFK-204	ENST00000479197	GAGE10	A6NGK3	116 aa		11.09	□□□□□ -0.63
RFK-204	ENST00000479197	TIMM17B	O60830	172 aa		11.09	□□□□□ -0.63
RFK-204	ENST00000479197	ADAMTSL4-AS1	Q5T5F5	129 aa		11.09	□□□□□ -0.63
RFK-204	ENST00000479197	LOC107984156	A0A0G2JMH3	177 aa		11.09	□□□□□ -0.63
RFK-204	ENST00000479197	RPL37AP8	A6NKH3	93 aa		11.09	□□□□□ -0.63
RFK-204	ENST00000479197	FLG2	Q5D862	2391 aa	Predicted RBP	11.09	□□□□□ -0.63
RFK-204	ENST00000479197	PCP2	Q8IVA1	136 aa		11.09	□□□□□ -0.63
RFK-204	ENST00000479197	ARL17A	Q8IVW1	177 aa		11.09	□□□□□ -0.63
RFK-204	ENST00000479197	LITAF	Q99732	161 aa		11.09	□□□□□ -0.63
RFK-204	ENST00000479197	MIEN1	Q9BRT3	115 aa		11.09	□□□□□ -0.63
RFK-204	ENST00000479197	SCGB1D4	Q6XE38	83 aa		11.08	□□□□□ -0.64
RFK-204	ENST00000479197	MYCBP2	O75592	4640 aa		11.08	□□□□□ -0.64
RFK-204	ENST00000479197	JOSD1	Q15040	202 aa	Predicted RBP	11.05	□□□□□ -0.64
RFK-204	ENST00000479197	IGKV2-28	A0A075B6P5	120 aa		11.04	□□□□□ -0.64
RFK-204	ENST00000479197		M0R378	163 aa		11.04	□□□□□ -0.64
RFK-204	ENST00000479197	IGKV2D-28	P01615	120 aa		11.04	□□□□□ -0.64
RFK-204	ENST00000479197	NPC2	P61916	151 aa		11.04	□□□□□ -0.64
RFK-204	ENST00000479197	IGLV1-50	A0A075B6I6	118 aa		11.04	□□□□□ -0.64
RFK-204	ENST00000479197	TMEM238	C9JI98	176 aa		11.04	□□□□□ -0.64
RFK-204	ENST00000479197	NCR3	O14931	201 aa		11.04	□□□□□ -0.64
RFK-204	ENST00000479197	IGLV7-43	P04211	117 aa		11.04	□□□□□ -0.64
RFK-204	ENST00000479197	SOSTDC1	Q6X4U4	206 aa		11.04	□□□□□ -0.64
RFK-204	ENST00000479197	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.03	□□□□□ -0.64
RFK-204	ENST00000479197	SPINK6	Q6UWN8	80 aa		11.03	□□□□□ -0.64
RFK-204	ENST00000479197	EIF4EBP3	O60516	100 aa	Predicted RBP	11.02	□□□□□ -0.65
RFK-204	ENST00000479197	NDUFC2	O95298	119 aa		11.02	□□□□□ -0.65
RFK-204	ENST00000479197	LINC00308	Q8TCZ7	52 aa		11.02	□□□□□ -0.65
RFK-204	ENST00000479197	SPANXD	Q9BXN6	97 aa		11.01	□□□□□ -0.65
RFK-204	ENST00000479197	SPANXC	Q9NY87	97 aa		11.01	□□□□□ -0.65
RFK-204	ENST00000479197	SPANXB1	Q9NS25	103 aa	Predicted RBP	11	□□□□□ -0.65
RFK-204	ENST00000479197	BCE1	O60756	84 aa		10.99	□□□□□ -0.65
RFK-204	ENST00000479197	FAT3	Q8TDW7	4589 aa		10.99	□□□□□ -0.65
RFK-204	ENST00000479197	LRP1	Q07954	4544 aa	Known RBP	10.99	□□□□□ -0.65
RFK-204	ENST00000479197	TRBV10-2	A0A0K0K1G8	114 aa		10.99	□□□□□ -0.65
RFK-204	ENST00000479197	REG3G	Q6UW15	175 aa		10.98	□□□□□ -0.65
RFK-204	ENST00000479197	VAMP8	Q9BV40	100 aa		10.98	□□□□□ -0.65
RFK-204	ENST00000479197	PAM16	Q9Y3D7	125 aa		10.98	□□□□□ -0.65
RFK-204	ENST00000479197	COX8A	P10176	69 aa		10.97	□□□□□ -0.65
RFK-204	ENST00000479197	PYY3	Q5JQD4	70 aa		10.97	□□□□□ -0.65
RFK-204	ENST00000479197		Q6ZVH6	145 aa		10.97	□□□□□ -0.65
RFK-204	ENST00000479197	TMEM126A	Q9H061	195 aa		10.97	□□□□□ -0.65
RFK-204	ENST00000479197	SPATA45	Q537H7	98 aa		10.96	□□□□□ -0.65
RFK-204	ENST00000479197	COPS9	Q8WXC6	57 aa		10.96	□□□□□ -0.65
RFK-204	ENST00000479197	TRBV10-3	A0A0K0K1G6	114 aa		10.95	□□□□□ -0.66
RFK-204	ENST00000479197	ZNF861P	O60384	105 aa		10.95	□□□□□ -0.66
RFK-204	ENST00000479197	IFITM1	P13164	125 aa		10.95	□□□□□ -0.66
RFK-204	ENST00000479197	DIRC1	Q969H9	104 aa		10.95	□□□□□ -0.66
RFK-204	ENST00000479197	PRY	O14603	147 aa		10.94	□□□□□ -0.66
RFK-204	ENST00000479197	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.94	□□□□□ -0.66
RFK-204	ENST00000479197	DDT	P30046	118 aa		10.94	□□□□□ -0.66
RFK-204	ENST00000479197	RPL28	P46779	137 aa	Known RBP	10.94	□□□□□ -0.66
RFK-204	ENST00000479197	PPDPF	Q9H3Y8	114 aa		10.94	□□□□□ -0.66
RFK-204	ENST00000479197		H0Y9J4	135 aa		10.93	□□□□□ -0.66
RFK-204	ENST00000479197	DLEU1	O43261	78 aa		10.93	□□□□□ -0.66
RFK-204	ENST00000479197	OXT	P01178	125 aa		10.93	□□□□□ -0.66
RFK-204	ENST00000479197	UBE2A	P49459	152 aa		10.93	□□□□□ -0.66
RFK-204	ENST00000479197	S100A7L2	Q5SY68	101 aa		10.93	□□□□□ -0.66
RFK-204	ENST00000479197	KCNQ1DN	Q9H478	68 aa		10.93	□□□□□ -0.66
RFK-204	ENST00000479197	S100A12	P80511	92 aa		10.92	□□□□□ -0.66
RFK-204	ENST00000479197	C14orf144	Q96I85	54 aa		10.92	□□□□□ -0.66
RFK-204	ENST00000479197	IGLV6-57	P01721	117 aa		10.91	□□□□□ -0.66
RFK-204	ENST00000479197	FAM19A1	Q7Z5A9	133 aa		10.91	□□□□□ -0.66
RFK-204	ENST00000479197	KRTAP13-1	Q8IUC0	172 aa		10.91	□□□□□ -0.66
RFK-204	ENST00000479197	MUSTN1	Q8IVN3	82 aa		10.91	□□□□□ -0.66
RFK-204	ENST00000479197	SPRR1A	P35321	89 aa		10.89	□□□□□ -0.67
RFK-204	ENST00000479197	LINC00518	Q8N0U6	118 aa		10.89	□□□□□ -0.67
RFK-204	ENST00000479197	PRLH	P81277	87 aa		10.89	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms