RNA–Protein interactions for RNA: ENST00000479004.1

TRIM8-203, Transcript of tripartite motif containing 8, humanhuman

TSL 2

Gene TRIM8, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-203ENST00000479004 NDUFA12Q9UI09 145 aa12.57□□□□□ -0.4
TRIM8-203ENST00000479004 PSORS1C2Q9UIG4 136 aa12.57□□□□□ -0.4
TRIM8-203ENST00000479004 MYMXA0A1B0GTQ4 84 aa12.56□□□□□ -0.4
TRIM8-203ENST00000479004 HERV-K104P63124 156 aa12.56□□□□□ -0.4
TRIM8-203ENST00000479004 ATOH7Q8N100 152 aa12.56□□□□□ -0.4
TRIM8-203ENST00000479004 SCGB1D1O95968 90 aa12.55□□□□□ -0.4
TRIM8-203ENST00000479004 NMUP48645 174 aa12.55□□□□□ -0.4
TRIM8-203ENST00000479004 TSPEAR-AS2P59090 65 aa12.55□□□□□ -0.4
TRIM8-203ENST00000479004 KRTAP10-8P60410 259 aa12.54□□□□□ -0.4
TRIM8-203ENST00000479004 ERG28Q9UKR5 140 aa12.54□□□□□ -0.4
TRIM8-203ENST00000479004 FAM168BA1KXE4 195 aa12.53□□□□□ -0.4
TRIM8-203ENST00000479004 COX17Q14061 63 aa12.53□□□□□ -0.4
TRIM8-203ENST00000479004 GAGE2EQ4V326 116 aa12.53□□□□□ -0.4
TRIM8-203ENST00000479004 GAGE2DQ9UEU5 116 aa12.53□□□□□ -0.4
TRIM8-203ENST00000479004 LINC00587B1AMM8 73 aa12.52□□□□□ -0.41
TRIM8-203ENST00000479004 PFN2P35080 140 aa12.51□□□□□ -0.41
TRIM8-203ENST00000479004 C1orf137Q5JT78 98 aa12.51□□□□□ -0.41
TRIM8-203ENST00000479004 HSBP1L1C9JCN9 74 aa12.5□□□□□ -0.41
TRIM8-203ENST00000479004 LRP2P98164 4655 aa12.5□□□□□ -0.41
TRIM8-203ENST00000479004 IGKV2D-26A0A0A0MRZ7 120 aa12.49□□□□□ -0.41
TRIM8-203ENST00000479004 ANKRD39Q53RE8 183 aa12.49□□□□□ -0.41
TRIM8-203ENST00000479004 MEIG1Q5JSS6 88 aa12.49□□□□□ -0.41
TRIM8-203ENST00000479004 LINC00158P58513 81 aa12.48□□□□□ -0.41
TRIM8-203ENST00000479004 FAM19A5Q7Z5A7 132 aaPredicted RBP12.48□□□□□ -0.41
TRIM8-203ENST00000479004 KRTAP7-1Q8IUC3 87 aa12.48□□□□□ -0.41
TRIM8-203ENST00000479004 JOSD1Q15040 202 aaPredicted RBP12.47□□□□□ -0.41
TRIM8-203ENST00000479004 KRTAP11-1Q8IUC1 163 aa12.47□□□□□ -0.41
TRIM8-203ENST00000479004 C9orf129Q5T035 196 aaKnown RBP12.46□□□□□ -0.41
TRIM8-203ENST00000479004 XAGE1AQ9HD64 81 aa12.46□□□□□ -0.41
TRIM8-203ENST00000479004 SMIM13P0DJ93 91 aa12.45□□□□□ -0.42
TRIM8-203ENST00000479004 ZNF815PA8K554 130 aa12.44□□□□□ -0.42
TRIM8-203ENST00000479004 IGLV7-43P04211 117 aa12.44□□□□□ -0.42
TRIM8-203ENST00000479004 A0A0J9YXY3 114 aa12.43□□□□□ -0.42
TRIM8-203ENST00000479004 A0A0U1RRA0 63 aa12.43□□□□□ -0.42
TRIM8-203ENST00000479004 SND1-IT1Q9HBX3 110 aa12.43□□□□□ -0.42
TRIM8-203ENST00000479004 M0QXV9 152 aa12.42□□□□□ -0.42
TRIM8-203ENST00000479004 TTTY13Q9BZ97 58 aa12.41□□□□□ -0.42
TRIM8-203ENST00000479004 MIR7-3HGQ8N6C7 128 aa12.4□□□□□ -0.42
TRIM8-203ENST00000479004 DIRC1Q969H9 104 aa12.4□□□□□ -0.42
TRIM8-203ENST00000479004 UBE2BP63146 152 aa12.39□□□□□ -0.43
TRIM8-203ENST00000479004 TIMM17BO60830 172 aa12.38□□□□□ -0.43
TRIM8-203ENST00000479004 PCP2Q8IVA1 136 aa12.38□□□□□ -0.43
TRIM8-203ENST00000479004 H0Y9J4 135 aa12.37□□□□□ -0.43
TRIM8-203ENST00000479004 PYY3Q5JQD4 70 aa12.37□□□□□ -0.43
TRIM8-203ENST00000479004 SCGB1D4Q6XE38 83 aa12.37□□□□□ -0.43
TRIM8-203ENST00000479004 VAMP8Q9BV40 100 aa12.37□□□□□ -0.43
TRIM8-203ENST00000479004 RPL24P83731 157 aaKnown RBP12.35□□□□□ -0.43
TRIM8-203ENST00000479004 DAND5Q8N907 189 aa12.34□□□□□ -0.43
TRIM8-203ENST00000479004 TP73-AS1Q9UF72 201 aa12.34□□□□□ -0.43
TRIM8-203ENST00000479004 PAM16Q9Y3D7 125 aa12.34□□□□□ -0.43
TRIM8-203ENST00000479004 C22orf24Q9Y442 160 aa12.34□□□□□ -0.43
TRIM8-203ENST00000479004 IGLV5-37A0A075B6J1 123 aa12.33□□□□□ -0.44
TRIM8-203ENST00000479004 SPATA45Q537H7 98 aa12.33□□□□□ -0.44
TRIM8-203ENST00000479004 LBHQ53QV2 105 aaPredicted RBP12.33□□□□□ -0.44
TRIM8-203ENST00000479004 ADAMTSL4-AS1Q5T5F5 129 aa12.33□□□□□ -0.44
TRIM8-203ENST00000479004 LOC107984156A0A0G2JMH3 177 aa12.32□□□□□ -0.44
TRIM8-203ENST00000479004 TMEM238C9JI98 176 aa12.32□□□□□ -0.44
TRIM8-203ENST00000479004 ARL17AQ8IVW1 177 aa12.32□□□□□ -0.44
TRIM8-203ENST00000479004 NKAPP1Q8N9T2 125 aa12.32□□□□□ -0.44
TRIM8-203ENST00000479004 LITAFQ99732 161 aa12.32□□□□□ -0.44
TRIM8-203ENST00000479004 MIEN1Q9BRT3 115 aa12.32□□□□□ -0.44
TRIM8-203ENST00000479004 COX8AP10176 69 aa12.31□□□□□ -0.44
TRIM8-203ENST00000479004 VPREB1P12018 145 aa12.31□□□□□ -0.44
TRIM8-203ENST00000479004 BOD1L2Q8IYS8 172 aa12.31□□□□□ -0.44
TRIM8-203ENST00000479004 PRR26Q8N8Z3 221 aa12.31□□□□□ -0.44
TRIM8-203ENST00000479004 RNF213Q63HN8 5207 aa12.31□□□□□ -0.44
TRIM8-203ENST00000479004 MRPL55Q7Z7F7 128 aaKnown RBP12.3□□□□□ -0.44
TRIM8-203ENST00000479004 KRTAP1-4P0C5Y4 121 aa12.29□□□□□ -0.44
TRIM8-203ENST00000479004 DLEU1O43261 78 aa12.28□□□□□ -0.44
TRIM8-203ENST00000479004 SPANXDQ9BXN6 97 aa12.28□□□□□ -0.44
TRIM8-203ENST00000479004 SPANXCQ9NY87 97 aa12.28□□□□□ -0.44
TRIM8-203ENST00000479004 LPAP08519 4548 aa12.28□□□□□ -0.44
TRIM8-203ENST00000479004 Q6ZVH6 145 aa12.27□□□□□ -0.45
TRIM8-203ENST00000479004 ZNF861PO60384 105 aa12.26□□□□□ -0.45
TRIM8-203ENST00000479004 NPC2P61916 151 aa12.26□□□□□ -0.45
TRIM8-203ENST00000479004 Q8NDZ9 215 aa12.26□□□□□ -0.45
TRIM8-203ENST00000479004 LINC00308Q8TCZ7 52 aa12.26□□□□□ -0.45
TRIM8-203ENST00000479004 COPS9Q8WXC6 57 aa12.26□□□□□ -0.45
TRIM8-203ENST00000479004 IGLV1-50A0A075B6I6 118 aa12.25□□□□□ -0.45
TRIM8-203ENST00000479004 S100A12P80511 92 aa12.25□□□□□ -0.45
TRIM8-203ENST00000479004 SOSTDC1Q6X4U4 206 aa12.25□□□□□ -0.45
TRIM8-203ENST00000479004 C14orf144Q96I85 54 aa12.25□□□□□ -0.45
TRIM8-203ENST00000479004 LINC00167Q96N53 147 aa12.25□□□□□ -0.45
TRIM8-203ENST00000479004 M0R378 163 aa12.24□□□□□ -0.45
TRIM8-203ENST00000479004 NDUFC2O95298 119 aa12.24□□□□□ -0.45
TRIM8-203ENST00000479004 IFITM1P13164 125 aa12.24□□□□□ -0.45
TRIM8-203ENST00000479004 GAGE10A6NGK3 116 aa12.23□□□□□ -0.45
TRIM8-203ENST00000479004 SLC25A34Q6PIV7 304 aa12.23□□□□□ -0.45
TRIM8-203ENST00000479004 SPANXB1Q9NS25 103 aaPredicted RBP12.23□□□□□ -0.45
TRIM8-203ENST00000479004 PPDPFQ9H3Y8 114 aa12.22□□□□□ -0.45
TRIM8-203ENST00000479004 LOC105371267A0A1B0GV96 52 aa12.21□□□□□ -0.45
TRIM8-203ENST00000479004 EIF4EBP3O60516 100 aaPredicted RBP12.21□□□□□ -0.45
TRIM8-203ENST00000479004 TRBV10-2A0A0K0K1G8 114 aa12.2□□□□□ -0.46
TRIM8-203ENST00000479004 RPL37AP8A6NKH3 93 aa12.2□□□□□ -0.46
TRIM8-203ENST00000479004 NCR3O14931 201 aa12.2□□□□□ -0.46
TRIM8-203ENST00000479004 BCE1O60756 84 aa12.19□□□□□ -0.46
TRIM8-203ENST00000479004 SMIM6P0DI80 62 aa12.19□□□□□ -0.46
TRIM8-203ENST00000479004 MUSTN1Q8IVN3 82 aa12.18□□□□□ -0.46
TRIM8-203ENST00000479004 RPL13AP40429 203 aaKnown RBP12.17□□□□□ -0.46
TRIM8-203ENST00000479004 HIGD1BQ9P298 99 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms