RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 CXCL5P42830 114 aa4.35□□□□□ -1.71
BRCA1-215ENST00000478531 RPL37AP61513 92 aaKnown RBP4.35□□□□□ -1.71
BRCA1-215ENST00000478531 MTURNQ8N3F0 131 aa4.35□□□□□ -1.71
BRCA1-215ENST00000478531 DMBT1Q9UGM3 2413 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-215ENST00000478531 IGLV5-39A0A0G2JS06 123 aa4.34□□□□□ -1.71
BRCA1-215ENST00000478531 NDUFC2-KCTD14E9PQ53 114 aa4.34□□□□□ -1.71
BRCA1-215ENST00000478531 TLX1NBP0CAT3 122 aa4.34□□□□□ -1.71
BRCA1-215ENST00000478531 C7orf33Q8WU49 177 aa4.34□□□□□ -1.71
BRCA1-215ENST00000478531 PMCHL2Q9BQD1 86 aa4.34□□□□□ -1.71
BRCA1-215ENST00000478531 FAM168BA1KXE4 195 aa4.34□□□□□ -1.71
BRCA1-215ENST00000478531 INAFM2P0DMQ5 153 aa4.34□□□□□ -1.71
BRCA1-215ENST00000478531 FAM19A5Q7Z5A7 132 aaPredicted RBP4.34□□□□□ -1.71
BRCA1-215ENST00000478531 A0A1W2PNN7 141 aa4.33□□□□□ -1.72
BRCA1-215ENST00000478531 TMEM223A0PJW6 202 aa4.33□□□□□ -1.72
BRCA1-215ENST00000478531 PLNP26678 52 aa4.33□□□□□ -1.72
BRCA1-215ENST00000478531 V9GYY9 64 aa4.33□□□□□ -1.72
BRCA1-215ENST00000478531 ZNF625Q96I27 306 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-215ENST00000478531 XAGE1AQ9HD64 81 aa4.33□□□□□ -1.72
BRCA1-215ENST00000478531 LRP1Q07954 4544 aaKnown RBP4.32□□□□□ -1.72
BRCA1-215ENST00000478531 DPM2O94777 84 aa4.32□□□□□ -1.72
BRCA1-215ENST00000478531 IGKCP01834 107 aa4.32□□□□□ -1.72
BRCA1-215ENST00000478531 PFN2P35080 140 aa4.32□□□□□ -1.72
BRCA1-215ENST00000478531 KRTAP10-4P60372 401 aaPredicted RBP4.32□□□□□ -1.72
BRCA1-215ENST00000478531 C9orf129Q5T035 196 aaKnown RBP4.32□□□□□ -1.72
BRCA1-215ENST00000478531 PHF5AQ7RTV0 110 aaKnown RBP4.32□□□□□ -1.72
BRCA1-215ENST00000478531 VPS25Q9BRG1 176 aa4.31□□□□□ -1.72
BRCA1-215ENST00000478531 FAT3Q8TDW7 4589 aa4.31□□□□□ -1.72
BRCA1-215ENST00000478531 SYS1-DBNDD2H3BUS1 97 aa4.31□□□□□ -1.72
BRCA1-215ENST00000478531 PRR3P79522 188 aaKnown RBP4.31□□□□□ -1.72
BRCA1-215ENST00000478531 COA6Q5JTJ3 125 aaKnown RBP4.31□□□□□ -1.72
BRCA1-215ENST00000478531 HNRNPA3P51991 378 aaKnown RBP4.3□□□□□ -1.72
BRCA1-215ENST00000478531 KRTDAPP60985 99 aa4.3□□□□□ -1.72
BRCA1-215ENST00000478531 HERVK_113P61574 105 aa4.3□□□□□ -1.72
BRCA1-215ENST00000478531 ERG28Q9UKR5 140 aa4.3□□□□□ -1.72
BRCA1-215ENST00000478531 C3orf79P0CE67 100 aa4.29□□□□□ -1.72
BRCA1-215ENST00000478531 TSPEAR-AS2P59090 65 aa4.29□□□□□ -1.72
BRCA1-215ENST00000478531 UBE2BP63146 152 aa4.29□□□□□ -1.72
BRCA1-215ENST00000478531 SFTA2Q6UW10 78 aa4.29□□□□□ -1.72
BRCA1-215ENST00000478531 KRTAP7-1Q8IUC3 87 aa4.29□□□□□ -1.72
BRCA1-215ENST00000478531 MEIG1Q5JSS6 88 aa4.29□□□□□ -1.72
BRCA1-215ENST00000478531 NDUFA12Q9UI09 145 aa4.29□□□□□ -1.72
BRCA1-215ENST00000478531 HERC1Q15751 4861 aa4.28□□□□□ -1.72
BRCA1-215ENST00000478531 LEPROTO15243 131 aa4.28□□□□□ -1.72
BRCA1-215ENST00000478531 LINC00158P58513 81 aa4.28□□□□□ -1.72
BRCA1-215ENST00000478531 LINC01545Q5VT33 79 aa4.28□□□□□ -1.72
BRCA1-215ENST00000478531 SMIM20Q8N5G0 67 aa4.28□□□□□ -1.72
BRCA1-215ENST00000478531 PLEKHB2Q96CS7 222 aa4.28□□□□□ -1.72
BRCA1-215ENST00000478531 PSORS1C2Q9UIG4 136 aa4.28□□□□□ -1.72
BRCA1-215ENST00000478531 MYMXA0A1B0GTQ4 84 aa4.27□□□□□ -1.73
BRCA1-215ENST00000478531 J3QQQ9 107 aa4.27□□□□□ -1.73
BRCA1-215ENST00000478531 SMIM13P0DJ93 91 aa4.27□□□□□ -1.73
BRCA1-215ENST00000478531 LGALS3P17931 250 aaKnown RBP4.27□□□□□ -1.73
BRCA1-215ENST00000478531 S100A2P29034 98 aa4.27□□□□□ -1.73
BRCA1-215ENST00000478531 COX17Q14061 63 aa4.27□□□□□ -1.73
BRCA1-215ENST00000478531 C1orf137Q5JT78 98 aa4.27□□□□□ -1.73
BRCA1-215ENST00000478531 SND1-IT1Q9HBX3 110 aa4.27□□□□□ -1.73
BRCA1-215ENST00000478531 C22orf24Q9Y442 160 aa4.27□□□□□ -1.73
BRCA1-215ENST00000478531 C20orf202A1L168 122 aa4.27□□□□□ -1.73
BRCA1-215ENST00000478531 DDTP30046 118 aa4.27□□□□□ -1.73
BRCA1-215ENST00000478531 KRTAP11-1Q8IUC1 163 aa4.27□□□□□ -1.73
BRCA1-215ENST00000478531 HIST3H2BBQ8N257 126 aa4.27□□□□□ -1.73
BRCA1-215ENST00000478531 NKAPP1Q8N9T2 125 aa4.27□□□□□ -1.73
BRCA1-215ENST00000478531 MRPL55Q7Z7F7 128 aaKnown RBP4.26□□□□□ -1.73
BRCA1-215ENST00000478531 ATOH7Q8N100 152 aa4.26□□□□□ -1.73
BRCA1-215ENST00000478531 E9PLD3 99 aa4.25□□□□□ -1.73
BRCA1-215ENST00000478531 DAND5Q8N907 189 aa4.25□□□□□ -1.73
BRCA1-215ENST00000478531 HIST1H2BLQ99880 126 aa4.25□□□□□ -1.73
BRCA1-215ENST00000478531 SS18L2Q9UHA2 77 aa4.25□□□□□ -1.73
BRCA1-215ENST00000478531 RPL37AP8A6NKH3 93 aa4.25□□□□□ -1.73
BRCA1-215ENST00000478531 NMUP48645 174 aa4.25□□□□□ -1.73
BRCA1-215ENST00000478531 SNRPEP62304 92 aaKnown RBP4.25□□□□□ -1.73
BRCA1-215ENST00000478531 MIR7-3HGQ8N6C7 128 aa4.25□□□□□ -1.73
BRCA1-215ENST00000478531 TP73-AS1Q9UF72 201 aa4.25□□□□□ -1.73
BRCA1-215ENST00000478531 IGKV2-28A0A075B6P5 120 aa4.24□□□□□ -1.73
BRCA1-215ENST00000478531 IGKV2D-28P01615 120 aa4.24□□□□□ -1.73
BRCA1-215ENST00000478531 Q8NDZ9 215 aa4.24□□□□□ -1.73
BRCA1-215ENST00000478531 LINC00167Q96N53 147 aa4.24□□□□□ -1.73
BRCA1-215ENST00000478531 PLA2G2DQ9UNK4 145 aa4.24□□□□□ -1.73
BRCA1-215ENST00000478531 TNXBP22105 4242 aa4.24□□□□□ -1.73
BRCA1-215ENST00000478531 IGKV2D-26A0A0A0MRZ7 120 aa4.23□□□□□ -1.73
BRCA1-215ENST00000478531 RPL24P83731 157 aaKnown RBP4.23□□□□□ -1.73
BRCA1-215ENST00000478531 IGLV5-37A0A075B6J1 123 aa4.23□□□□□ -1.73
BRCA1-215ENST00000478531 ZNF815PA8K554 130 aa4.23□□□□□ -1.73
BRCA1-215ENST00000478531 NCR3O14931 201 aa4.23□□□□□ -1.73
BRCA1-215ENST00000478531 IGLV7-43P04211 117 aa4.23□□□□□ -1.73
BRCA1-215ENST00000478531 NPC2P61916 151 aa4.23□□□□□ -1.73
BRCA1-215ENST00000478531 TTTY13Q9BZ97 58 aa4.23□□□□□ -1.73
BRCA1-215ENST00000478531 A0A0J9YXY3 114 aa4.22□□□□□ -1.73
BRCA1-215ENST00000478531 SPINK6Q6UWN8 80 aa4.22□□□□□ -1.73
BRCA1-215ENST00000478531 KRTAP29-1A8MX34 341 aaPredicted RBP4.22□□□□□ -1.73
BRCA1-215ENST00000478531 TAL2Q16559 108 aa4.22□□□□□ -1.73
BRCA1-215ENST00000478531 MIEN1Q9BRT3 115 aa4.22□□□□□ -1.73
BRCA1-215ENST00000478531 K7ERU9 68 aa4.21□□□□□ -1.74
BRCA1-215ENST00000478531 OXTP01178 125 aa4.21□□□□□ -1.74
BRCA1-215ENST00000478531 SRSF9Q13242 221 aaKnown RBP eCLIP4.21□□□□□ -1.74
BRCA1-215ENST00000478531 ADAMTSL4-AS1Q5T5F5 129 aa4.2□□□□□ -1.74
BRCA1-215ENST00000478531 REG3GQ6UW15 175 aa4.2□□□□□ -1.74
BRCA1-215ENST00000478531 SCGB1D4Q6XE38 83 aa4.2□□□□□ -1.74
BRCA1-215ENST00000478531 DIRC1Q969H9 104 aa4.2□□□□□ -1.74
BRCA1-215ENST00000478531 PPDPFQ9H3Y8 114 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms