RNA–Protein interactions for RNA: ENST00000478264.1

PLOD3-213, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 663 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-213ENST00000478264 LINC00528Q8N1L1 170 aa11.42□□□□□ -0.58
PLOD3-213ENST00000478264 VAMP8Q9BV40 100 aa11.42□□□□□ -0.58
PLOD3-213ENST00000478264 DAND5Q8N907 189 aa11.41□□□□□ -0.58
PLOD3-213ENST00000478264 C7orf33Q8WU49 177 aa11.41□□□□□ -0.58
PLOD3-213ENST00000478264 Q8N1X5 172 aa11.4□□□□□ -0.58
PLOD3-213ENST00000478264 LITAFQ99732 161 aa11.4□□□□□ -0.58
PLOD3-213ENST00000478264 PAM16Q9Y3D7 125 aa11.4□□□□□ -0.58
PLOD3-213ENST00000478264 IGLV5-37A0A075B6J1 123 aa11.39□□□□□ -0.59
PLOD3-213ENST00000478264 RPL24P83731 157 aaKnown RBP11.39□□□□□ -0.59
PLOD3-213ENST00000478264 SPATA45Q537H7 98 aa11.39□□□□□ -0.59
PLOD3-213ENST00000478264 PHF5AQ7RTV0 110 aaKnown RBP11.39□□□□□ -0.59
PLOD3-213ENST00000478264 KRTAP17-1Q9BYP8 105 aa11.39□□□□□ -0.59
PLOD3-213ENST00000478264 TP73-AS1Q9UF72 201 aa11.39□□□□□ -0.59
PLOD3-213ENST00000478264 TMEM238C9JI98 176 aa11.38□□□□□ -0.59
PLOD3-213ENST00000478264 FAM229AH3BQW9 127 aa11.38□□□□□ -0.59
PLOD3-213ENST00000478264 ADAMTSL4-AS1Q5T5F5 129 aa11.38□□□□□ -0.59
PLOD3-213ENST00000478264 MIEN1Q9BRT3 115 aa11.38□□□□□ -0.59
PLOD3-213ENST00000478264 C22orf24Q9Y442 160 aa11.38□□□□□ -0.59
PLOD3-213ENST00000478264 LOC107984156A0A0G2JMH3 177 aa11.37□□□□□ -0.59
PLOD3-213ENST00000478264 COX8AP10176 69 aa11.37□□□□□ -0.59
PLOD3-213ENST00000478264 VPREB1P12018 145 aa11.37□□□□□ -0.59
PLOD3-213ENST00000478264 ARL17AQ8IVW1 177 aa11.37□□□□□ -0.59
PLOD3-213ENST00000478264 NKAPP1Q8N9T2 125 aa11.37□□□□□ -0.59
PLOD3-213ENST00000478264 LBHQ53QV2 105 aaPredicted RBP11.36□□□□□ -0.59
PLOD3-213ENST00000478264 Q5VSD8 79 aa11.36□□□□□ -0.59
PLOD3-213ENST00000478264 BOD1L2Q8IYS8 172 aa11.36□□□□□ -0.59
PLOD3-213ENST00000478264 MRPL55Q7Z7F7 128 aaKnown RBP11.35□□□□□ -0.59
PLOD3-213ENST00000478264 SPANXDQ9BXN6 97 aa11.35□□□□□ -0.59
PLOD3-213ENST00000478264 SPANXCQ9NY87 97 aa11.35□□□□□ -0.59
PLOD3-213ENST00000478264 RPL37AP61513 92 aaKnown RBP11.34□□□□□ -0.59
PLOD3-213ENST00000478264 Q8NDZ9 215 aa11.34□□□□□ -0.59
PLOD3-213ENST00000478264 VPS13BQ7Z7G8 4022 aa11.33□□□□□ -0.6
PLOD3-213ENST00000478264 DLEU1O43261 78 aa11.33□□□□□ -0.6
PLOD3-213ENST00000478264 PLA2G1BP04054 148 aaKnown RBP11.33□□□□□ -0.6
PLOD3-213ENST00000478264 NPC2P61916 151 aa11.33□□□□□ -0.6
PLOD3-213ENST00000478264 UBE2BP63146 152 aa11.33□□□□□ -0.6
PLOD3-213ENST00000478264 SOSTDC1Q6X4U4 206 aa11.32□□□□□ -0.6
PLOD3-213ENST00000478264 Q6ZVH6 145 aa11.32□□□□□ -0.6
PLOD3-213ENST00000478264 LINC00308Q8TCZ7 52 aa11.32□□□□□ -0.6
PLOD3-213ENST00000478264 C14orf144Q96I85 54 aa11.32□□□□□ -0.6
PLOD3-213ENST00000478264 COPS9Q8WXC6 57 aa11.31□□□□□ -0.6
PLOD3-213ENST00000478264 NDUFC2O95298 119 aa11.3□□□□□ -0.6
PLOD3-213ENST00000478264 S100A12P80511 92 aa11.3□□□□□ -0.6
PLOD3-213ENST00000478264 LINC00167Q96N53 147 aa11.3□□□□□ -0.6
PLOD3-213ENST00000478264 SPANXB1Q9NS25 103 aaPredicted RBP11.3□□□□□ -0.6
PLOD3-213ENST00000478264 GAGE10A6NGK3 116 aa11.29□□□□□ -0.6
PLOD3-213ENST00000478264 EIF4EBP3O60516 100 aaPredicted RBP11.29□□□□□ -0.6
PLOD3-213ENST00000478264 IFITM1P13164 125 aa11.29□□□□□ -0.6
PLOD3-213ENST00000478264 PRR3P79522 188 aaKnown RBP11.29□□□□□ -0.6
PLOD3-213ENST00000478264 SLC25A34Q6PIV7 304 aa11.29□□□□□ -0.6
PLOD3-213ENST00000478264 LOC105371267A0A1B0GV96 52 aa11.28□□□□□ -0.6
PLOD3-213ENST00000478264 M0R378 163 aa11.28□□□□□ -0.6
PLOD3-213ENST00000478264 NCR3O14931 201 aa11.28□□□□□ -0.6
PLOD3-213ENST00000478264 SMIM6P0DI80 62 aa11.28□□□□□ -0.6
PLOD3-213ENST00000478264 PPDPFQ9H3Y8 114 aa11.28□□□□□ -0.6
PLOD3-213ENST00000478264 PSORS1C2Q9UIG4 136 aa11.28□□□□□ -0.6
PLOD3-213ENST00000478264 KRTAP10-4P60372 401 aaPredicted RBP11.27□□□□□ -0.61
PLOD3-213ENST00000478264 KRTAP11-1Q8IUC1 163 aa11.27□□□□□ -0.61
PLOD3-213ENST00000478264 TRBV10-2A0A0K0K1G8 114 aa11.26□□□□□ -0.61
PLOD3-213ENST00000478264 RPL37AP8A6NKH3 93 aa11.26□□□□□ -0.61
PLOD3-213ENST00000478264 SRSF9Q13242 221 aaKnown RBP eCLIP11.26□□□□□ -0.61
PLOD3-213ENST00000478264 IGLV1-50A0A075B6I6 118 aa11.24□□□□□ -0.61
PLOD3-213ENST00000478264 IGKV2-28A0A075B6P5 120 aa11.24□□□□□ -0.61
PLOD3-213ENST00000478264 IGKV2D-28P01615 120 aa11.24□□□□□ -0.61
PLOD3-213ENST00000478264 C1orf137Q5JT78 98 aa11.24□□□□□ -0.61
PLOD3-213ENST00000478264 MUSTN1Q8IVN3 82 aa11.24□□□□□ -0.61
PLOD3-213ENST00000478264 HIGD1BQ9P298 99 aa11.24□□□□□ -0.61
PLOD3-213ENST00000478264 PCLOQ9Y6V0 5065 aa11.24□□□□□ -0.61
PLOD3-213ENST00000478264 KRTAP4-5Q9BYR2 181 aa11.22□□□□□ -0.61
PLOD3-213ENST00000478264 ABCA13Q86UQ4 5058 aa11.21□□□□□ -0.61
PLOD3-213ENST00000478264 C2orf91Q6ZV80 131 aa11.21□□□□□ -0.61
PLOD3-213ENST00000478264 HIST1H4GQ99525 98 aa11.21□□□□□ -0.61
PLOD3-213ENST00000478264 DDTP30046 118 aa11.2□□□□□ -0.62
PLOD3-213ENST00000478264 LINC00518Q8N0U6 118 aa11.2□□□□□ -0.62
PLOD3-213ENST00000478264 TRBV10-3A0A0K0K1G6 114 aa11.19□□□□□ -0.62
PLOD3-213ENST00000478264 S100A7L2Q5SY68 101 aa11.19□□□□□ -0.62
PLOD3-213ENST00000478264 UQCR10Q9UDW1 63 aa11.19□□□□□ -0.62
PLOD3-213ENST00000478264 PRYO14603 147 aa11.18□□□□□ -0.62
PLOD3-213ENST00000478264 BCE1O60756 84 aa11.18□□□□□ -0.62
PLOD3-213ENST00000478264 REG3GQ6UW15 175 aa11.18□□□□□ -0.62
PLOD3-213ENST00000478264 IGLV6-57P01721 117 aa11.17□□□□□ -0.62
PLOD3-213ENST00000478264 IGLV7-43P04211 117 aa11.17□□□□□ -0.62
PLOD3-213ENST00000478264 TMEM126AQ9H061 195 aa11.17□□□□□ -0.62
PLOD3-213ENST00000478264 SRRM2Q9UQ35 2752 aaKnown RBP11.16□□□□□ -0.62
PLOD3-213ENST00000478264 KCNQ1DNQ9H478 68 aa11.16□□□□□ -0.62
PLOD3-213ENST00000478264 PKHD1L1Q86WI1 4243 aa11.16□□□□□ -0.62
PLOD3-213ENST00000478264 HNRNPA3P51991 378 aaKnown RBP11.15□□□□□ -0.62
PLOD3-213ENST00000478264 TAL2Q16559 108 aa11.15□□□□□ -0.62
PLOD3-213ENST00000478264 A4D1N5 150 aa11.14□□□□□ -0.63
PLOD3-213ENST00000478264 INAFM2P0DMQ5 153 aa11.14□□□□□ -0.63
PLOD3-213ENST00000478264 LINC00337Q8N6G1 96 aa11.14□□□□□ -0.63
PLOD3-213ENST00000478264 OR13C6PQ8NH95 151 aa11.14□□□□□ -0.63
PLOD3-213ENST00000478264 CBY1Q9Y3M2 126 aa11.14□□□□□ -0.63
PLOD3-213ENST00000478264 TRAV23DV6A0A075B6W5 121 aa11.12□□□□□ -0.63
PLOD3-213ENST00000478264 SPRR1AP35321 89 aa11.12□□□□□ -0.63
PLOD3-213ENST00000478264 SPINK6Q6UWN8 80 aa11.12□□□□□ -0.63
PLOD3-213ENST00000478264 C12orf57Q99622 126 aa11.12□□□□□ -0.63
PLOD3-213ENST00000478264 TRAV13-2A0A0B4J235 113 aa11.11□□□□□ -0.63
PLOD3-213ENST00000478264 ZNF861PO60384 105 aa11.11□□□□□ -0.63
PLOD3-213ENST00000478264 FAM19A1Q7Z5A9 133 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms