RNA–Protein interactions for RNA: ENST00000477403.1

RPL39-203, Transcript of ribosomal protein L39, humanhuman

TSL 3

Gene RPL39, Length 405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-203ENST00000477403 HIGD1BQ9P298 99 aa2.41□□□□□ -2.02
RPL39-203ENST00000477403 SS18L2Q9UHA2 77 aa2.41□□□□□ -2.02
RPL39-203ENST00000477403 IGKV2D-26A0A0A0MRZ7 120 aa2.4□□□□□ -2.03
RPL39-203ENST00000477403 TRAV12-1A0A0B4J245 112 aa2.4□□□□□ -2.03
RPL39-203ENST00000477403 A0A1B0GVX0 72 aa2.4□□□□□ -2.03
RPL39-203ENST00000477403 M0R381 172 aa2.4□□□□□ -2.03
RPL39-203ENST00000477403 SMR3BP02814 79 aaPredicted RBP2.4□□□□□ -2.03
RPL39-203ENST00000477403 SCGB1A1P11684 91 aa2.4□□□□□ -2.03
RPL39-203ENST00000477403 FXYD7P58549 80 aa2.4□□□□□ -2.03
RPL39-203ENST00000477403 KRTAP10-1P60331 282 aa2.4□□□□□ -2.03
RPL39-203ENST00000477403 HERVK_113P63121 156 aa2.4□□□□□ -2.03
RPL39-203ENST00000477403 RNASE13Q5GAN3 156 aaKnown RBP2.4□□□□□ -2.03
RPL39-203ENST00000477403 TMEM78Q5T7P6 136 aa2.4□□□□□ -2.03
RPL39-203ENST00000477403 DAZ4Q86SG3 579 aaKnown RBP2.4□□□□□ -2.03
RPL39-203ENST00000477403 PCP2Q8IVA1 136 aa2.4□□□□□ -2.03
RPL39-203ENST00000477403 GTSF1LQ9H1H1 148 aa2.4□□□□□ -2.03
RPL39-203ENST00000477403 A0A087WX48 190 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 TRAV26-2A0A0B4J265 109 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 TRAV21A0A0B4J279 112 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 FAM168BA1KXE4 195 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 C7orf71A4D174 169 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 H3BNG1 76 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 K7EMI3 77 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 K7EP34 96 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 DPM2O94777 84 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 IGKCP01834 107 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 TLX1NBP0CAT3 122 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 SMIM17P0DL12 118 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 LINC00313P59037 77 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 LINC00315P59091 139 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 SAMD13Q5VXD3 122 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 AMMECR1LQ6DCA0 310 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 FOXI2Q6ZQN5 318 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 Q6ZQT7 251 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 Q6ZRN7 208 aaPredicted RBP2.39□□□□□ -2.03
RPL39-203ENST00000477403 C15orf56Q8N910 161 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 LINC00167Q96N53 147 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 C20orf78Q9BR46 151 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 SMIM2Q9BVW6 85 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 CST9LQ9H4G1 147 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 ANAPC11Q9NYG5 84 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 VPS13BQ7Z7G8 4022 aa2.39□□□□□ -2.03
RPL39-203ENST00000477403 HMCN2Q8NDA2 5059 aa2.38□□□□□ -2.03
RPL39-203ENST00000477403 TRBV7-3A0A075B6L6 115 aa2.38□□□□□ -2.03
RPL39-203ENST00000477403 TRBV25-1A0A075B6N4 114 aa2.38□□□□□ -2.03
RPL39-203ENST00000477403 A0A087WTM6 91 aa2.38□□□□□ -2.03
RPL39-203ENST00000477403 A0A1W2PPM0 123 aa2.38□□□□□ -2.03
RPL39-203ENST00000477403 H3BVH4 76 aa2.38□□□□□ -2.03
RPL39-203ENST00000477403 DEFB130BP0DP73 79 aa2.38□□□□□ -2.03
RPL39-203ENST00000477403 DEFB130AP0DP74 79 aa2.38□□□□□ -2.03
RPL39-203ENST00000477403 RNASE3P12724 160 aaKnown RBP2.38□□□□□ -2.03
RPL39-203ENST00000477403 FXYD2P54710 66 aa2.38□□□□□ -2.03
RPL39-203ENST00000477403 ESRGQ1W209 222 aa2.38□□□□□ -2.03
RPL39-203ENST00000477403 OCIAD2Q56VL3 154 aa2.38□□□□□ -2.03
RPL39-203ENST00000477403 TOMM6Q96B49 74 aa2.38□□□□□ -2.03
RPL39-203ENST00000477403 ODF3Q96PU9 254 aa2.38□□□□□ -2.03
RPL39-203ENST00000477403 DPH3P1Q9H4G8 78 aa2.38□□□□□ -2.03
RPL39-203ENST00000477403 MRPL35Q9NZE8 188 aaKnown RBP2.38□□□□□ -2.03
RPL39-203ENST00000477403 TIMM8BQ9Y5J9 83 aaPredicted RBP2.38□□□□□ -2.03
RPL39-203ENST00000477403 TRBV6-5A0A0K0K1A5 114 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 A8MTW9 85 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 F8VRH5 84 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 BPY2O14599 106 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 APOMO95445 188 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 PPP1R17O96001 155 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 PLNP26678 52 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 ASIPP42127 132 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 POLR2KP53803 58 aaKnown RBP2.37□□□□□ -2.03
RPL39-203ENST00000477403 DEFB1P60022 68 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 SPANXN1Q5VSR9 72 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 NTM-AS1Q6ZSK4 140 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 ANKRD29Q8N6D5 301 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 OR5A1Q8NGJ0 315 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 TTTY13Q9BZ97 58 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 NACAE9PAV3 2078 aa2.37□□□□□ -2.03
RPL39-203ENST00000477403 IGLV4-69A0A075B6H9 119 aa2.36□□□□□ -2.03
RPL39-203ENST00000477403 A0A0J9YX75 114 aa2.36□□□□□ -2.03
RPL39-203ENST00000477403 LINC01549A6NIU2 74 aa2.36□□□□□ -2.03
RPL39-203ENST00000477403 IGIPA6NJ69 53 aa2.36□□□□□ -2.03
RPL39-203ENST00000477403 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.36□□□□□ -2.03
RPL39-203ENST00000477403 H3BUT2 72 aa2.36□□□□□ -2.03
RPL39-203ENST00000477403 GNRH2O43555 120 aa2.36□□□□□ -2.03
RPL39-203ENST00000477403 SMIM13P0DJ93 91 aa2.36□□□□□ -2.03
RPL39-203ENST00000477403 GTF2H5Q6ZYL4 71 aa2.36□□□□□ -2.03
RPL39-203ENST00000477403 RPL39LQ96EH5 51 aaKnown RBP2.36□□□□□ -2.03
RPL39-203ENST00000477403 AP1S3Q96PC3 154 aa2.36□□□□□ -2.03
RPL39-203ENST00000477403 SCGB3A1Q96QR1 104 aa2.36□□□□□ -2.03
RPL39-203ENST00000477403 TRBV27A0A0K0K1C4 114 aa2.35□□□□□ -2.03
RPL39-203ENST00000477403 MYMXA0A1B0GTQ4 84 aa2.35□□□□□ -2.03
RPL39-203ENST00000477403 K7ERJ3 54 aa2.35□□□□□ -2.03
RPL39-203ENST00000477403 K7ERU9 68 aa2.35□□□□□ -2.03
RPL39-203ENST00000477403 FABP2P12104 132 aa2.35□□□□□ -2.03
RPL39-203ENST00000477403 S100A4P26447 101 aaKnown RBP2.35□□□□□ -2.03
RPL39-203ENST00000477403 RNASE4P34096 147 aaKnown RBP2.35□□□□□ -2.03
RPL39-203ENST00000477403 FUSP35637 526 aaKnown RBP eCLIP2.35□□□□□ -2.03
RPL39-203ENST00000477403 UBE2D1P51668 147 aa2.35□□□□□ -2.03
RPL39-203ENST00000477403 SYCNQ0VAF6 134 aa2.35□□□□□ -2.03
RPL39-203ENST00000477403 LUZP6Q538Z0 58 aa2.35□□□□□ -2.03
RPL39-203ENST00000477403 AMTNQ6UX39 209 aa2.35□□□□□ -2.03
RPL39-203ENST00000477403 ZFP2Q6ZN57 461 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms