RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 TP73-AS1Q9UF72 201 aa18.4■□□□□ 0.54
HOXB3-208ENST00000476342 INAFM2P0DMQ5 153 aa18.39■□□□□ 0.53
HOXB3-208ENST00000476342 IGKV2D-26A0A0A0MRZ7 120 aa18.38■□□□□ 0.53
HOXB3-208ENST00000476342 UBE2BP63146 152 aa18.38■□□□□ 0.53
HOXB3-208ENST00000476342 PRR3P79522 188 aaKnown RBP18.38■□□□□ 0.53
HOXB3-208ENST00000476342 MIR7-3HGQ8N6C7 128 aa18.38■□□□□ 0.53
HOXB3-208ENST00000476342 LBHQ53QV2 105 aaPredicted RBP18.37■□□□□ 0.53
HOXB3-208ENST00000476342 NKAPP1Q8N9T2 125 aa18.36■□□□□ 0.53
HOXB3-208ENST00000476342 RPL24P83731 157 aaKnown RBP18.35■□□□□ 0.53
HOXB3-208ENST00000476342 MRPL55Q7Z7F7 128 aaKnown RBP18.35■□□□□ 0.53
HOXB3-208ENST00000476342 IGLV5-37A0A075B6J1 123 aa18.34■□□□□ 0.53
HOXB3-208ENST00000476342 ANKRD39Q53RE8 183 aa18.34■□□□□ 0.53
HOXB3-208ENST00000476342 A0A0J9YXY3 114 aa18.33■□□□□ 0.53
HOXB3-208ENST00000476342 ZNF815PA8K554 130 aa18.33■□□□□ 0.53
HOXB3-208ENST00000476342 SCGB1D1O95968 90 aa18.32■□□□□ 0.52
HOXB3-208ENST00000476342 PSORS1C2Q9UIG4 136 aa18.32■□□□□ 0.52
HOXB3-208ENST00000476342 TMA7Q9Y2S6 64 aaKnown RBP18.32■□□□□ 0.52
HOXB3-208ENST00000476342 HSBP1L1C9JCN9 74 aa18.32■□□□□ 0.52
HOXB3-208ENST00000476342 VPREB1P12018 145 aa18.3■□□□□ 0.52
HOXB3-208ENST00000476342 PCLOQ9Y6V0 5065 aa18.29■□□□□ 0.52
HOXB3-208ENST00000476342 TTTY13Q9BZ97 58 aa18.29■□□□□ 0.52
HOXB3-208ENST00000476342 DAND5Q8N907 189 aa18.28■□□□□ 0.52
HOXB3-208ENST00000476342 C1orf137Q5JT78 98 aa18.26■□□□□ 0.51
HOXB3-208ENST00000476342 KRTAP11-1Q8IUC1 163 aa18.26■□□□□ 0.51
HOXB3-208ENST00000476342 BOD1L2Q8IYS8 172 aa18.26■□□□□ 0.51
HOXB3-208ENST00000476342 LINC00167Q96N53 147 aa18.26■□□□□ 0.51
HOXB3-208ENST00000476342 MIEN1Q9BRT3 115 aa18.26■□□□□ 0.51
HOXB3-208ENST00000476342 GAGE10A6NGK3 116 aa18.23■□□□□ 0.51
HOXB3-208ENST00000476342 TIMM17BO60830 172 aa18.23■□□□□ 0.51
HOXB3-208ENST00000476342 HNRNPA3P51991 378 aaKnown RBP18.23■□□□□ 0.51
HOXB3-208ENST00000476342 LOC107984156A0A0G2JMH3 177 aa18.23■□□□□ 0.51
HOXB3-208ENST00000476342 SCGB1D4Q6XE38 83 aa18.23■□□□□ 0.51
HOXB3-208ENST00000476342 ARL17AQ8IVW1 177 aa18.23■□□□□ 0.51
HOXB3-208ENST00000476342 Q8NDZ9 215 aa18.23■□□□□ 0.51
HOXB3-208ENST00000476342 RPL37AP8A6NKH3 93 aa18.21■□□□□ 0.51
HOXB3-208ENST00000476342 ADAMTSL4-AS1Q5T5F5 129 aa18.21■□□□□ 0.51
HOXB3-208ENST00000476342 FLG2Q5D862 2391 aaPredicted RBP18.2■□□□□ 0.5
HOXB3-208ENST00000476342 PCP2Q8IVA1 136 aa18.2■□□□□ 0.5
HOXB3-208ENST00000476342 LITAFQ99732 161 aa18.19■□□□□ 0.5
HOXB3-208ENST00000476342 PKHD1L1Q86WI1 4243 aa18.17■□□□□ 0.5
HOXB3-208ENST00000476342 M0R378 163 aa18.16■□□□□ 0.5
HOXB3-208ENST00000476342 IGKV2-28A0A075B6P5 120 aa18.15■□□□□ 0.5
HOXB3-208ENST00000476342 TMEM238C9JI98 176 aa18.15■□□□□ 0.5
HOXB3-208ENST00000476342 IGKV2D-28P01615 120 aa18.15■□□□□ 0.5
HOXB3-208ENST00000476342 IGLV7-43P04211 117 aa18.15■□□□□ 0.5
HOXB3-208ENST00000476342 NPC2P61916 151 aa18.15■□□□□ 0.5
HOXB3-208ENST00000476342 JOSD1Q15040 202 aaPredicted RBP18.15■□□□□ 0.5
HOXB3-208ENST00000476342 SPINK6Q6UWN8 80 aa18.15■□□□□ 0.5
HOXB3-208ENST00000476342 IGLV1-50A0A075B6I6 118 aa18.14■□□□□ 0.49
HOXB3-208ENST00000476342 NCR3O14931 201 aa18.14■□□□□ 0.49
HOXB3-208ENST00000476342 MYCBP2O75592 4640 aa18.12■□□□□ 0.49
HOXB3-208ENST00000476342 NDUFC2O95298 119 aa18.12■□□□□ 0.49
HOXB3-208ENST00000476342 SRSF9Q13242 221 aaKnown RBP eCLIP18.12■□□□□ 0.49
HOXB3-208ENST00000476342 SOSTDC1Q6X4U4 206 aa18.11■□□□□ 0.49
HOXB3-208ENST00000476342 LINC00308Q8TCZ7 52 aa18.11■□□□□ 0.49
HOXB3-208ENST00000476342 SPANXDQ9BXN6 97 aa18.09■□□□□ 0.49
HOXB3-208ENST00000476342 SPANXB1Q9NS25 103 aaPredicted RBP18.09■□□□□ 0.49
HOXB3-208ENST00000476342 SPANXCQ9NY87 97 aa18.09■□□□□ 0.49
HOXB3-208ENST00000476342 BCE1O60756 84 aa18.08■□□□□ 0.49
HOXB3-208ENST00000476342 TRBV10-2A0A0K0K1G8 114 aa18.07■□□□□ 0.48
HOXB3-208ENST00000476342 EIF4EBP3O60516 100 aaPredicted RBP18.06■□□□□ 0.48
HOXB3-208ENST00000476342 Q6ZVH6 145 aa18.06■□□□□ 0.48
HOXB3-208ENST00000476342 COPS9Q8WXC6 57 aa18.06■□□□□ 0.48
HOXB3-208ENST00000476342 VAMP8Q9BV40 100 aa18.06■□□□□ 0.48
HOXB3-208ENST00000476342 REG3GQ6UW15 175 aa18.05■□□□□ 0.48
HOXB3-208ENST00000476342 TMEM126AQ9H061 195 aa18.04■□□□□ 0.48
HOXB3-208ENST00000476342 DIRC1Q969H9 104 aa18.03■□□□□ 0.48
HOXB3-208ENST00000476342 PAM16Q9Y3D7 125 aa18.03■□□□□ 0.48
HOXB3-208ENST00000476342 ZNF861PO60384 105 aa18.02■□□□□ 0.48
HOXB3-208ENST00000476342 COX8AP10176 69 aa18.02■□□□□ 0.48
HOXB3-208ENST00000476342 IFITM1P13164 125 aa18.02■□□□□ 0.48
HOXB3-208ENST00000476342 S100A12P80511 92 aa18.02■□□□□ 0.48
HOXB3-208ENST00000476342 SPATA45Q537H7 98 aa18.01■□□□□ 0.47
HOXB3-208ENST00000476342 TRBV10-3A0A0K0K1G6 114 aa18■□□□□ 0.47
HOXB3-208ENST00000476342 RPL28P46779 137 aaKnown RBP18■□□□□ 0.47
HOXB3-208ENST00000476342 PYY3Q5JQD4 70 aa18■□□□□ 0.47
HOXB3-208ENST00000476342 PRYO14603 147 aa17.99■□□□□ 0.47
HOXB3-208ENST00000476342 OXTP01178 125 aa17.99■□□□□ 0.47
HOXB3-208ENST00000476342 DDTP30046 118 aa17.99■□□□□ 0.47
HOXB3-208ENST00000476342 KRTAP29-1A8MX34 341 aaPredicted RBP17.98■□□□□ 0.47
HOXB3-208ENST00000476342 UBE2AP49459 152 aa17.98■□□□□ 0.47
HOXB3-208ENST00000476342 S100A7L2Q5SY68 101 aa17.98■□□□□ 0.47
HOXB3-208ENST00000476342 PPDPFQ9H3Y8 114 aa17.98■□□□□ 0.47
HOXB3-208ENST00000476342 KCNQ1DNQ9H478 68 aa17.98■□□□□ 0.47
HOXB3-208ENST00000476342 LRP1Q07954 4544 aaKnown RBP17.97■□□□□ 0.47
HOXB3-208ENST00000476342 H0Y9J4 135 aa17.97■□□□□ 0.47
HOXB3-208ENST00000476342 FAM19A1Q7Z5A9 133 aa17.96■□□□□ 0.47
HOXB3-208ENST00000476342 FAT3Q8TDW7 4589 aa17.96■□□□□ 0.46
HOXB3-208ENST00000476342 DLEU1O43261 78 aa17.95■□□□□ 0.46
HOXB3-208ENST00000476342 MUSTN1Q8IVN3 82 aa17.94■□□□□ 0.46
HOXB3-208ENST00000476342 LINC00518Q8N0U6 118 aa17.94■□□□□ 0.46
HOXB3-208ENST00000476342 IGLV6-57P01721 117 aa17.93■□□□□ 0.46
HOXB3-208ENST00000476342 C14orf144Q96I85 54 aa17.93■□□□□ 0.46
HOXB3-208ENST00000476342 J3QL48 77 aa17.91■□□□□ 0.46
HOXB3-208ENST00000476342 KRTAP13-1Q8IUC0 172 aa17.91■□□□□ 0.46
HOXB3-208ENST00000476342 CBY1Q9Y3M2 126 aa17.9■□□□□ 0.46
HOXB3-208ENST00000476342 SPRR1AP35321 89 aa17.89■□□□□ 0.46
HOXB3-208ENST00000476342 PRLHP81277 87 aa17.89■□□□□ 0.45
HOXB3-208ENST00000476342 SLC25A34Q6PIV7 304 aa17.89■□□□□ 0.45
HOXB3-208ENST00000476342 LINC00337Q8N6G1 96 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 302.7 ms