RNA–Protein interactions for RNA: ENST00000475996.1

HLA-F-224, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 1,505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-224ENST00000475996 SND1-IT1Q9HBX3 110 aa8.17□□□□□ -1.1
HLA-F-224ENST00000475996 FAM30AQ9NZY2 134 aa8.17□□□□□ -1.1
HLA-F-224ENST00000475996 TMEM238C9JI98 176 aa8.16□□□□□ -1.1
HLA-F-224ENST00000475996 C9orf129Q5T035 196 aaKnown RBP8.16□□□□□ -1.1
HLA-F-224ENST00000475996 EPPK1P58107 5090 aaKnown RBP8.16□□□□□ -1.1
HLA-F-224ENST00000475996 DPH3Q96FX2 82 aa8.15□□□□□ -1.1
HLA-F-224ENST00000475996 C2orf91Q6ZV80 131 aa8.14□□□□□ -1.11
HLA-F-224ENST00000475996 SPACA4Q8TDM5 124 aa8.14□□□□□ -1.11
HLA-F-224ENST00000475996 SPANXDQ9BXN6 97 aa8.14□□□□□ -1.11
HLA-F-224ENST00000475996 SPANXCQ9NY87 97 aa8.14□□□□□ -1.11
HLA-F-224ENST00000475996 UQCR10Q9UDW1 63 aa8.14□□□□□ -1.11
HLA-F-224ENST00000475996 APOBP04114 4563 aaKnown RBP8.14□□□□□ -1.11
HLA-F-224ENST00000475996 FAM168BA1KXE4 195 aa8.13□□□□□ -1.11
HLA-F-224ENST00000475996 HAMPP81172 84 aa8.13□□□□□ -1.11
HLA-F-224ENST00000475996 SOSTDC1Q6X4U4 206 aa8.13□□□□□ -1.11
HLA-F-224ENST00000475996 LINC00474Q9P2X8 69 aa8.13□□□□□ -1.11
HLA-F-224ENST00000475996 A0A1W2PNN7 141 aa8.12□□□□□ -1.11
HLA-F-224ENST00000475996 SRSF9Q13242 221 aaKnown RBP eCLIP8.12□□□□□ -1.11
HLA-F-224ENST00000475996 Q6ZSA8 131 aa8.12□□□□□ -1.11
HLA-F-224ENST00000475996 FAM19A5Q7Z5A7 132 aaPredicted RBP8.12□□□□□ -1.11
HLA-F-224ENST00000475996 LINC00308Q8TCZ7 52 aa8.12□□□□□ -1.11
HLA-F-224ENST00000475996 MIEN1Q9BRT3 115 aa8.12□□□□□ -1.11
HLA-F-224ENST00000475996 SPANXB1Q9NS25 103 aaPredicted RBP8.12□□□□□ -1.11
HLA-F-224ENST00000475996 HIGD1BQ9P298 99 aa8.12□□□□□ -1.11
HLA-F-224ENST00000475996 A0A087WYN8 130 aa8.11□□□□□ -1.11
HLA-F-224ENST00000475996 SERTAD4-AS1Q5TG53 156 aa8.11□□□□□ -1.11
HLA-F-224ENST00000475996 Q8NDZ9 215 aa8.11□□□□□ -1.11
HLA-F-224ENST00000475996 HIST1H4GQ99525 98 aa8.11□□□□□ -1.11
HLA-F-224ENST00000475996 HNRNPA3P51991 378 aaKnown RBP8.1□□□□□ -1.11
HLA-F-224ENST00000475996 MUSTN1Q8IVN3 82 aa8.1□□□□□ -1.11
HLA-F-224ENST00000475996 TSTD3H0UI37 97 aa8.09□□□□□ -1.11
HLA-F-224ENST00000475996 Q6ZVH6 145 aa8.09□□□□□ -1.11
HLA-F-224ENST00000475996 KRTAP7-1Q8IUC3 87 aa8.09□□□□□ -1.11
HLA-F-224ENST00000475996 IFITM1P13164 125 aa8.08□□□□□ -1.12
HLA-F-224ENST00000475996 SCXQ7RTU7 201 aa8.08□□□□□ -1.12
HLA-F-224ENST00000475996 CIRBP-AS1Q8TBR5 109 aa8.08□□□□□ -1.12
HLA-F-224ENST00000475996 LOC107984156A0A0G2JMH3 177 aa8.08□□□□□ -1.12
HLA-F-224ENST00000475996 VPREB1P12018 145 aa8.08□□□□□ -1.12
HLA-F-224ENST00000475996 ARL17AQ8IVW1 177 aa8.08□□□□□ -1.12
HLA-F-224ENST00000475996 NCR3O14931 201 aa8.07□□□□□ -1.12
HLA-F-224ENST00000475996 PRR3P79522 188 aaKnown RBP8.07□□□□□ -1.12
HLA-F-224ENST00000475996 RPL24P83731 157 aaKnown RBP8.07□□□□□ -1.12
HLA-F-224ENST00000475996 PLAC8Q9NZF1 115 aa8.07□□□□□ -1.12
HLA-F-224ENST00000475996 PLA2G2DQ9UNK4 145 aa8.07□□□□□ -1.12
HLA-F-224ENST00000475996 M0QXV9 152 aa8.06□□□□□ -1.12
HLA-F-224ENST00000475996 PHF5AQ7RTV0 110 aaKnown RBP8.06□□□□□ -1.12
HLA-F-224ENST00000475996 NKAPP1Q8N9T2 125 aa8.06□□□□□ -1.12
HLA-F-224ENST00000475996 COPS9Q8WXC6 57 aa8.06□□□□□ -1.12
HLA-F-224ENST00000475996 C22orf24Q9Y442 160 aa8.06□□□□□ -1.12
HLA-F-224ENST00000475996 XGP55808 180 aa8.05□□□□□ -1.12
HLA-F-224ENST00000475996 IGLV5-37A0A075B6J1 123 aa8.04□□□□□ -1.12
HLA-F-224ENST00000475996 GAGE10A6NGK3 116 aa8.04□□□□□ -1.12
HLA-F-224ENST00000475996 HSD52Q0P140 79 aa8.04□□□□□ -1.12
HLA-F-224ENST00000475996 TAL2Q16559 108 aa8.04□□□□□ -1.12
HLA-F-224ENST00000475996 CEND1Q8N111 149 aa8.04□□□□□ -1.12
HLA-F-224ENST00000475996 HSPG2P98160 4391 aa8.04□□□□□ -1.12
HLA-F-224ENST00000475996 A4D1N5 150 aa8.03□□□□□ -1.12
HLA-F-224ENST00000475996 EPM2AB3EWF7 344 aa8.03□□□□□ -1.12
HLA-F-224ENST00000475996 NDUFC2O95298 119 aa8.03□□□□□ -1.12
HLA-F-224ENST00000475996 CTAG1AP78358 180 aa8.03□□□□□ -1.12
HLA-F-224ENST00000475996 FXYD2P54710 66 aa8.03□□□□□ -1.12
HLA-F-224ENST00000475996 MRPL55Q7Z7F7 128 aaKnown RBP8.03□□□□□ -1.12
HLA-F-224ENST00000475996 PPDPFQ9H3Y8 114 aa8.03□□□□□ -1.12
HLA-F-224ENST00000475996 RYR1P21817 5038 aa8.02□□□□□ -1.13
HLA-F-224ENST00000475996 VPS13BQ7Z7G8 4022 aa8.02□□□□□ -1.13
HLA-F-224ENST00000475996 IGKV2-28A0A075B6P5 120 aa8.02□□□□□ -1.13
HLA-F-224ENST00000475996 M0R378 163 aa8.02□□□□□ -1.13
HLA-F-224ENST00000475996 IGKV2D-28P01615 120 aa8.02□□□□□ -1.13
HLA-F-224ENST00000475996 C7orf33Q8WU49 177 aa8.02□□□□□ -1.13
HLA-F-224ENST00000475996 LINC00167Q96N53 147 aa8.02□□□□□ -1.13
HLA-F-224ENST00000475996 BIRC6Q9NR09 4857 aa8.01□□□□□ -1.13
HLA-F-224ENST00000475996 RPL37AP8A6NKH3 93 aa8.01□□□□□ -1.13
HLA-F-224ENST00000475996 DDTP30046 118 aa8.01□□□□□ -1.13
HLA-F-224ENST00000475996 UBE2BP63146 152 aa8□□□□□ -1.13
HLA-F-224ENST00000475996 LBHQ53QV2 105 aaPredicted RBP8□□□□□ -1.13
HLA-F-224ENST00000475996 TRBV10-2A0A0K0K1G8 114 aa7.99□□□□□ -1.13
HLA-F-224ENST00000475996 SMR3BP02814 79 aaPredicted RBP7.99□□□□□ -1.13
HLA-F-224ENST00000475996 HINT1P49773 126 aaPredicted RBP7.99□□□□□ -1.13
HLA-F-224ENST00000475996 KRTAP11-1Q8IUC1 163 aa7.99□□□□□ -1.13
HLA-F-224ENST00000475996 LINC00337Q8N6G1 96 aa7.99□□□□□ -1.13
HLA-F-224ENST00000475996 OR13C6PQ8NH95 151 aa7.99□□□□□ -1.13
HLA-F-224ENST00000475996 CDK2AP2O75956 126 aa7.98□□□□□ -1.13
HLA-F-224ENST00000475996 S100A7L2Q5SY68 101 aa7.98□□□□□ -1.13
HLA-F-224ENST00000475996 FAT1Q14517 4588 aa7.98□□□□□ -1.13
HLA-F-224ENST00000475996 TRBV10-3A0A0K0K1G6 114 aa7.98□□□□□ -1.13
HLA-F-224ENST00000475996 PCP4L1A6NKN8 68 aa7.98□□□□□ -1.13
HLA-F-224ENST00000475996 CFC1BP0CG36 223 aa7.98□□□□□ -1.13
HLA-F-224ENST00000475996 CFC1P0CG37 223 aa7.98□□□□□ -1.13
HLA-F-224ENST00000475996 BVES-AS1Q5T3Y7 98 aa7.98□□□□□ -1.13
HLA-F-224ENST00000475996 A6NDN8 102 aa7.97□□□□□ -1.13
HLA-F-224ENST00000475996 NHP2Q9NX24 153 aaKnown RBP7.97□□□□□ -1.13
HLA-F-224ENST00000475996 IGLV1-50A0A075B6I6 118 aa7.96□□□□□ -1.14
HLA-F-224ENST00000475996 SVIPQ8NHG7 77 aa7.96□□□□□ -1.14
HLA-F-224ENST00000475996 KIAA1109Q2LD37 5005 aa7.96□□□□□ -1.14
HLA-F-224ENST00000475996 TRAV13-2A0A0B4J235 113 aa7.95□□□□□ -1.14
HLA-F-224ENST00000475996 IGLV6-57P01721 117 aa7.95□□□□□ -1.14
HLA-F-224ENST00000475996 RAB37Q96AX2 223 aa7.95□□□□□ -1.14
HLA-F-224ENST00000475996 M0R143 59 aa7.94□□□□□ -1.14
HLA-F-224ENST00000475996 RPL13AP40429 203 aaKnown RBP7.94□□□□□ -1.14
HLA-F-224ENST00000475996 BATFQ16520 125 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms