RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 KRTAP10-4P60372 401 aaPredicted RBP9.44□□□□□ -0.9
SNX13-207ENST00000475800 E9PLD3 99 aa9.43□□□□□ -0.9
SNX13-207ENST00000475800 HIST1H2BLQ99880 126 aa9.43□□□□□ -0.9
SNX13-207ENST00000475800 PLA2G2DQ9UNK4 145 aa9.43□□□□□ -0.9
SNX13-207ENST00000475800 LINC00158P58513 81 aa9.42□□□□□ -0.9
SNX13-207ENST00000475800 MEIG1Q5JSS6 88 aa9.42□□□□□ -0.9
SNX13-207ENST00000475800 PHF5AQ7RTV0 110 aaKnown RBP9.42□□□□□ -0.9
SNX13-207ENST00000475800 TP73-AS1Q9UF72 201 aa9.42□□□□□ -0.9
SNX13-207ENST00000475800 LRP1Q07954 4544 aaKnown RBP9.42□□□□□ -0.9
SNX13-207ENST00000475800 TSPEAR-AS2P59090 65 aa9.41□□□□□ -0.9
SNX13-207ENST00000475800 PRR3P79522 188 aaKnown RBP9.41□□□□□ -0.9
SNX13-207ENST00000475800 LBHQ53QV2 105 aaPredicted RBP9.41□□□□□ -0.9
SNX13-207ENST00000475800 KRTAP7-1Q8IUC3 87 aa9.41□□□□□ -0.9
SNX13-207ENST00000475800 SND1-IT1Q9HBX3 110 aa9.41□□□□□ -0.9
SNX13-207ENST00000475800 SNRPEP62304 92 aaKnown RBP9.4□□□□□ -0.9
SNX13-207ENST00000475800 SERTAD4-AS1Q5TG53 156 aa9.4□□□□□ -0.9
SNX13-207ENST00000475800 IGLV5-37A0A075B6J1 123 aa9.39□□□□□ -0.91
SNX13-207ENST00000475800 KRTAP29-1A8MX34 341 aaPredicted RBP9.39□□□□□ -0.91
SNX13-207ENST00000475800 UBE2BP63146 152 aa9.39□□□□□ -0.91
SNX13-207ENST00000475800 C22orf24Q9Y442 160 aa9.39□□□□□ -0.91
SNX13-207ENST00000475800 C5orf52A6NGY3 159 aa9.38□□□□□ -0.91
SNX13-207ENST00000475800 SMIM13P0DJ93 91 aa9.38□□□□□ -0.91
SNX13-207ENST00000475800 RPL24P83731 157 aaKnown RBP9.38□□□□□ -0.91
SNX13-207ENST00000475800 NKAPP1Q8N9T2 125 aa9.38□□□□□ -0.91
SNX13-207ENST00000475800 MRPL55Q7Z7F7 128 aaKnown RBP9.37□□□□□ -0.91
SNX13-207ENST00000475800 PSORS1C2Q9UIG4 136 aa9.37□□□□□ -0.91
SNX13-207ENST00000475800 FAT3Q8TDW7 4589 aa9.36□□□□□ -0.91
SNX13-207ENST00000475800 A0A0U1RRA0 63 aa9.36□□□□□ -0.91
SNX13-207ENST00000475800 MIR7-3HGQ8N6C7 128 aa9.35□□□□□ -0.91
SNX13-207ENST00000475800 VPREB1P12018 145 aa9.34□□□□□ -0.91
SNX13-207ENST00000475800 C1orf137Q5JT78 98 aa9.33□□□□□ -0.92
SNX13-207ENST00000475800 HMCN2Q8NDA2 5059 aa9.32□□□□□ -0.92
SNX13-207ENST00000475800 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
SNX13-207ENST00000475800 ZNF815PA8K554 130 aa9.32□□□□□ -0.92
SNX13-207ENST00000475800 HNRNPA3P51991 378 aaKnown RBP9.32□□□□□ -0.92
SNX13-207ENST00000475800 ATOH7Q8N100 152 aa9.32□□□□□ -0.92
SNX13-207ENST00000475800 LINC00167Q96N53 147 aa9.32□□□□□ -0.92
SNX13-207ENST00000475800 UBR4Q5T4S7 5183 aa9.31□□□□□ -0.92
SNX13-207ENST00000475800 IGKV2D-26A0A0A0MRZ7 120 aa9.31□□□□□ -0.92
SNX13-207ENST00000475800 LOC107984156A0A0G2JMH3 177 aa9.31□□□□□ -0.92
SNX13-207ENST00000475800 HSBP1L1C9JCN9 74 aa9.31□□□□□ -0.92
SNX13-207ENST00000475800 TIMM17BO60830 172 aa9.31□□□□□ -0.92
SNX13-207ENST00000475800 SPINK6Q6UWN8 80 aa9.31□□□□□ -0.92
SNX13-207ENST00000475800 ARL17AQ8IVW1 177 aa9.31□□□□□ -0.92
SNX13-207ENST00000475800 BOD1L2Q8IYS8 172 aa9.31□□□□□ -0.92
SNX13-207ENST00000475800 MIEN1Q9BRT3 115 aa9.31□□□□□ -0.92
SNX13-207ENST00000475800 KRTAP11-1Q8IUC1 163 aa9.3□□□□□ -0.92
SNX13-207ENST00000475800 PKHD1L1Q86WI1 4243 aa9.3□□□□□ -0.92
SNX13-207ENST00000475800 IGLV7-43P04211 117 aa9.29□□□□□ -0.92
SNX13-207ENST00000475800 ANKRD39Q53RE8 183 aa9.29□□□□□ -0.92
SNX13-207ENST00000475800 GAGE10A6NGK3 116 aa9.28□□□□□ -0.92
SNX13-207ENST00000475800 M0R378 163 aa9.28□□□□□ -0.92
SNX13-207ENST00000475800 SCGB1D1O95968 90 aa9.28□□□□□ -0.92
SNX13-207ENST00000475800 OXTP01178 125 aa9.28□□□□□ -0.92
SNX13-207ENST00000475800 SRSF9Q13242 221 aaKnown RBP eCLIP9.28□□□□□ -0.92
SNX13-207ENST00000475800 DAND5Q8N907 189 aa9.28□□□□□ -0.92
SNX13-207ENST00000475800 RPL37AP8A6NKH3 93 aa9.27□□□□□ -0.93
SNX13-207ENST00000475800 IGLV1-50A0A075B6I6 118 aa9.26□□□□□ -0.93
SNX13-207ENST00000475800 SCGB1D4Q6XE38 83 aa9.26□□□□□ -0.93
SNX13-207ENST00000475800 Q8NDZ9 215 aa9.26□□□□□ -0.93
SNX13-207ENST00000475800 TTTY13Q9BZ97 58 aa9.26□□□□□ -0.93
SNX13-207ENST00000475800 TMEM238C9JI98 176 aa9.25□□□□□ -0.93
SNX13-207ENST00000475800 BCE1O60756 84 aa9.25□□□□□ -0.93
SNX13-207ENST00000475800 NDUFC2O95298 119 aa9.25□□□□□ -0.93
SNX13-207ENST00000475800 REG3GQ6UW15 175 aa9.25□□□□□ -0.93
SNX13-207ENST00000475800 DIRC1Q969H9 104 aa9.25□□□□□ -0.93
SNX13-207ENST00000475800 IGKV2-28A0A075B6P5 120 aa9.24□□□□□ -0.93
SNX13-207ENST00000475800 TRBV10-2A0A0K0K1G8 114 aa9.24□□□□□ -0.93
SNX13-207ENST00000475800 IGKV2D-28P01615 120 aa9.24□□□□□ -0.93
SNX13-207ENST00000475800 ADAMTSL4-AS1Q5T5F5 129 aa9.24□□□□□ -0.93
SNX13-207ENST00000475800 COPS9Q8WXC6 57 aa9.24□□□□□ -0.93
SNX13-207ENST00000475800 LITAFQ99732 161 aa9.24□□□□□ -0.93
SNX13-207ENST00000475800 SPANXB1Q9NS25 103 aaPredicted RBP9.23□□□□□ -0.93
SNX13-207ENST00000475800 NCR3O14931 201 aa9.22□□□□□ -0.93
SNX13-207ENST00000475800 ZNF861PO60384 105 aa9.22□□□□□ -0.93
SNX13-207ENST00000475800 RPL28P46779 137 aaKnown RBP9.22□□□□□ -0.93
SNX13-207ENST00000475800 S100A12P80511 92 aa9.22□□□□□ -0.93
SNX13-207ENST00000475800 Q6ZVH6 145 aa9.22□□□□□ -0.93
SNX13-207ENST00000475800 PCP2Q8IVA1 136 aa9.22□□□□□ -0.93
SNX13-207ENST00000475800 LINC00308Q8TCZ7 52 aa9.22□□□□□ -0.93
SNX13-207ENST00000475800 SPANXDQ9BXN6 97 aa9.21□□□□□ -0.94
SNX13-207ENST00000475800 SPANXCQ9NY87 97 aa9.21□□□□□ -0.94
SNX13-207ENST00000475800 H0Y9J4 135 aa9.2□□□□□ -0.94
SNX13-207ENST00000475800 PRYO14603 147 aa9.2□□□□□ -0.94
SNX13-207ENST00000475800 NPC2P61916 151 aa9.2□□□□□ -0.94
SNX13-207ENST00000475800 SOSTDC1Q6X4U4 206 aa9.2□□□□□ -0.94
SNX13-207ENST00000475800 TMEM126AQ9H061 195 aa9.2□□□□□ -0.94
SNX13-207ENST00000475800 PPDPFQ9H3Y8 114 aa9.2□□□□□ -0.94
SNX13-207ENST00000475800 IFITM1P13164 125 aa9.19□□□□□ -0.94
SNX13-207ENST00000475800 UBE2AP49459 152 aa9.19□□□□□ -0.94
SNX13-207ENST00000475800 JOSD1Q15040 202 aaPredicted RBP9.19□□□□□ -0.94
SNX13-207ENST00000475800 KCNQ1DNQ9H478 68 aa9.18□□□□□ -0.94
SNX13-207ENST00000475800 CBY1Q9Y3M2 126 aa9.18□□□□□ -0.94
SNX13-207ENST00000475800 TRBV10-3A0A0K0K1G6 114 aa9.17□□□□□ -0.94
SNX13-207ENST00000475800 DDTP30046 118 aa9.17□□□□□ -0.94
SNX13-207ENST00000475800 S100A7L2Q5SY68 101 aa9.17□□□□□ -0.94
SNX13-207ENST00000475800 LINC01600Q96MT4 127 aa9.17□□□□□ -0.94
SNX13-207ENST00000475800 EIF4EBP3O60516 100 aaPredicted RBP9.16□□□□□ -0.94
SNX13-207ENST00000475800 FAM19A1Q7Z5A9 133 aa9.16□□□□□ -0.94
SNX13-207ENST00000475800 LINC00518Q8N0U6 118 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms