RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 FAM19A2Q8N3H0 131 aa10.4□□□□□ -0.74
PCGF3-209ENST00000475288 KRTAP13-2Q52LG2 175 aa10.39□□□□□ -0.75
PCGF3-209ENST00000475288 TIMM17AQ99595 171 aa10.39□□□□□ -0.75
PCGF3-209ENST00000475288 GEMIN7Q9H840 131 aaKnown RBP10.39□□□□□ -0.75
PCGF3-209ENST00000475288 HSPB8Q9UJY1 196 aa10.39□□□□□ -0.75
PCGF3-209ENST00000475288 ATP5LO75964 103 aa10.38□□□□□ -0.75
PCGF3-209ENST00000475288 LEPROTL1O95214 131 aa10.38□□□□□ -0.75
PCGF3-209ENST00000475288 PMCHL1Q16048 86 aa10.38□□□□□ -0.75
PCGF3-209ENST00000475288 ERASQ7Z444 233 aa10.38□□□□□ -0.75
PCGF3-209ENST00000475288 RPL37AP8A6NKH3 93 aa10.36□□□□□ -0.75
PCGF3-209ENST00000475288 SMIM1B2RUZ4 78 aa10.36□□□□□ -0.75
PCGF3-209ENST00000475288 FABP4P15090 132 aa10.36□□□□□ -0.75
PCGF3-209ENST00000475288 LINC00304Q8N9R0 145 aa10.36□□□□□ -0.75
PCGF3-209ENST00000475288 UBE2AP49459 152 aa10.34□□□□□ -0.75
PCGF3-209ENST00000475288 IFI27L1Q96BM0 104 aa10.34□□□□□ -0.75
PCGF3-209ENST00000475288 SCGB3A1Q96QR1 104 aa10.34□□□□□ -0.75
PCGF3-209ENST00000475288 ANAPC11Q9NYG5 84 aa10.34□□□□□ -0.75
PCGF3-209ENST00000475288 IGLV5-45A0A087WSX0 123 aa10.33□□□□□ -0.76
PCGF3-209ENST00000475288 COX7B2Q8TF08 81 aa10.33□□□□□ -0.76
PCGF3-209ENST00000475288 CDIP1Q9H305 208 aa10.33□□□□□ -0.76
PCGF3-209ENST00000475288 TINCRA0A1B0GVN0 87 aa10.32□□□□□ -0.76
PCGF3-209ENST00000475288 NKAPP1Q8N9T2 125 aa10.32□□□□□ -0.76
PCGF3-209ENST00000475288 RETNLBQ9BQ08 111 aa10.32□□□□□ -0.76
PCGF3-209ENST00000475288 MAP1LC3CQ9BXW4 147 aa10.32□□□□□ -0.76
PCGF3-209ENST00000475288 TRAV12-1A0A0B4J245 112 aa10.31□□□□□ -0.76
PCGF3-209ENST00000475288 LOC105371267A0A1B0GV96 52 aa10.31□□□□□ -0.76
PCGF3-209ENST00000475288 GAGE10A6NGK3 116 aa10.31□□□□□ -0.76
PCGF3-209ENST00000475288 IGLV7-46A0A075B6I9 117 aa10.3□□□□□ -0.76
PCGF3-209ENST00000475288 IGKV2D-26A0A0A0MRZ7 120 aa10.3□□□□□ -0.76
PCGF3-209ENST00000475288 C3orf79P0CE67 100 aa10.3□□□□□ -0.76
PCGF3-209ENST00000475288 PET117Q6UWS5 81 aa10.3□□□□□ -0.76
PCGF3-209ENST00000475288 SYS1-DBNDD2H3BUS1 97 aa10.29□□□□□ -0.76
PCGF3-209ENST00000475288 AKR1D1P51857 326 aa10.28□□□□□ -0.76
PCGF3-209ENST00000475288 PMVKQ15126 192 aa10.27□□□□□ -0.77
PCGF3-209ENST00000475288 LINC01545Q5VT33 79 aa10.27□□□□□ -0.77
PCGF3-209ENST00000475288 KRTDAPP60985 99 aa10.26□□□□□ -0.77
PCGF3-209ENST00000475288 CST9LQ9H4G1 147 aa10.26□□□□□ -0.77
PCGF3-209ENST00000475288 IGKV2-28A0A075B6P5 120 aa10.25□□□□□ -0.77
PCGF3-209ENST00000475288 C20orf202A1L168 122 aa10.25□□□□□ -0.77
PCGF3-209ENST00000475288 IGKV2D-28P01615 120 aa10.25□□□□□ -0.77
PCGF3-209ENST00000475288 JOSD1Q15040 202 aaPredicted RBP10.25□□□□□ -0.77
PCGF3-209ENST00000475288 TMEM126AQ9H061 195 aa10.24□□□□□ -0.77
PCGF3-209ENST00000475288 SPINK8P0C7L1 97 aa10.23□□□□□ -0.77
PCGF3-209ENST00000475288 VPREB1P12018 145 aa10.23□□□□□ -0.77
PCGF3-209ENST00000475288 PRLHP81277 87 aa10.23□□□□□ -0.77
PCGF3-209ENST00000475288 SPAG11AQ6PDA7 123 aa10.22□□□□□ -0.77
PCGF3-209ENST00000475288 PPDPFQ9H3Y8 114 aa10.22□□□□□ -0.77
PCGF3-209ENST00000475288 H3BRM9 83 aa10.21□□□□□ -0.77
PCGF3-209ENST00000475288 IGLC3P0DOY3 106 aa10.21□□□□□ -0.77
PCGF3-209ENST00000475288 PLNP26678 52 aa10.21□□□□□ -0.77
PCGF3-209ENST00000475288 FP248Q71RG6 208 aaPredicted RBP10.21□□□□□ -0.77
PCGF3-209ENST00000475288 FAM19A1Q7Z5A9 133 aa10.21□□□□□ -0.77
PCGF3-209ENST00000475288 PLEKHB2Q96CS7 222 aa10.21□□□□□ -0.77
PCGF3-209ENST00000475288 CHTOPQ9Y3Y2 248 aaKnown RBP10.21□□□□□ -0.77
PCGF3-209ENST00000475288 IGLV5-39A0A0G2JS06 123 aa10.2□□□□□ -0.78
PCGF3-209ENST00000475288 M0R378 163 aa10.2□□□□□ -0.78
PCGF3-209ENST00000475288 SMIM6P0DI80 62 aa10.2□□□□□ -0.78
PCGF3-209ENST00000475288 RPL24P83731 157 aaKnown RBP10.2□□□□□ -0.78
PCGF3-209ENST00000475288 COX17Q14061 63 aa10.2□□□□□ -0.78
PCGF3-209ENST00000475288 PYY3Q5JQD4 70 aa10.2□□□□□ -0.78
PCGF3-209ENST00000475288 DPM2O94777 84 aa10.19□□□□□ -0.78
PCGF3-209ENST00000475288 SND1-IT1Q9HBX3 110 aa10.19□□□□□ -0.78
PCGF3-209ENST00000475288 TMEM238C9JI98 176 aa10.18□□□□□ -0.78
PCGF3-209ENST00000475288 H0Y8G0 127 aa10.17□□□□□ -0.78
PCGF3-209ENST00000475288 SCGB1D1O95968 90 aa10.17□□□□□ -0.78
PCGF3-209ENST00000475288 IGKCP01834 107 aa10.17□□□□□ -0.78
PCGF3-209ENST00000475288 PFN2P35080 140 aa10.17□□□□□ -0.78
PCGF3-209ENST00000475288 C3orf22Q8N5N4 141 aa10.17□□□□□ -0.78
PCGF3-209ENST00000475288 ERG28Q9UKR5 140 aa10.16□□□□□ -0.78
PCGF3-209ENST00000475288 C11orf86A6NJI1 115 aa10.15□□□□□ -0.78
PCGF3-209ENST00000475288 SFTA2Q6UW10 78 aa10.14□□□□□ -0.79
PCGF3-209ENST00000475288 PMCHL2Q9BQD1 86 aa10.14□□□□□ -0.79
PCGF3-209ENST00000475288 ASB16-AS1Q495Z4 193 aa10.13□□□□□ -0.79
PCGF3-209ENST00000475288 SPRR4Q96PI1 79 aa10.13□□□□□ -0.79
PCGF3-209ENST00000475288 ZNF22P17026 224 aaPredicted RBP10.12□□□□□ -0.79
PCGF3-209ENST00000475288 KRTAP13-3Q3SY46 172 aa10.12□□□□□ -0.79
PCGF3-209ENST00000475288 Q8NDZ9 215 aa10.12□□□□□ -0.79
PCGF3-209ENST00000475288 ZNF706Q9Y5V0 76 aaPredicted RBP10.12□□□□□ -0.79
PCGF3-209ENST00000475288 HIGD2AQ9BW72 106 aa10.11□□□□□ -0.79
PCGF3-209ENST00000475288 C4orf48Q5BLP8 95 aa10.1□□□□□ -0.79
PCGF3-209ENST00000475288 LINC00337Q8N6G1 96 aa10.1□□□□□ -0.79
PCGF3-209ENST00000475288 TMEM223A0PJW6 202 aa10.08□□□□□ -0.8
PCGF3-209ENST00000475288 HSBP1L1C9JCN9 74 aa10.08□□□□□ -0.8
PCGF3-209ENST00000475288 HERVK_113P61574 105 aa10.08□□□□□ -0.8
PCGF3-209ENST00000475288 TMEM170BQ5T4T1 132 aa10.08□□□□□ -0.8
PCGF3-209ENST00000475288 LCE2DQ5TA82 110 aaPredicted RBP10.08□□□□□ -0.8
PCGF3-209ENST00000475288 ATOH7Q8N100 152 aa10.08□□□□□ -0.8
PCGF3-209ENST00000475288 VAMP8Q9BV40 100 aa10.08□□□□□ -0.8
PCGF3-209ENST00000475288 E9PLD3 99 aa10.07□□□□□ -0.8
PCGF3-209ENST00000475288 SPINK1P00995 79 aa10.07□□□□□ -0.8
PCGF3-209ENST00000475288 LINC01547P58512 204 aaPredicted RBP10.07□□□□□ -0.8
PCGF3-209ENST00000475288 S100A12P80511 92 aa10.07□□□□□ -0.8
PCGF3-209ENST00000475288 LINC00518Q8N0U6 118 aa10.07□□□□□ -0.8
PCGF3-209ENST00000475288 ZNF625Q96I27 306 aaPredicted RBP10.07□□□□□ -0.8
PCGF3-209ENST00000475288 C12orf57Q99622 126 aa10.06□□□□□ -0.8
PCGF3-209ENST00000475288 Q8NBF4 154 aa10.05□□□□□ -0.8
PCGF3-209ENST00000475288 PRYO14603 147 aa10.04□□□□□ -0.8
PCGF3-209ENST00000475288 SEC61BP60468 96 aaKnown RBP10.04□□□□□ -0.8
PCGF3-209ENST00000475288 SPRR1AP35321 89 aa10.03□□□□□ -0.8
PCGF3-209ENST00000475288 ANKRD39Q53RE8 183 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms