RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 FASNP49327 2511 aaKnown RBP7.67□□□□□ -1.18
VAPB-204ENST00000475243 C5orf42Q9H799 3197 aa7.67□□□□□ -1.18
VAPB-204ENST00000475243 C10orf142B7Z368 130 aa7.67□□□□□ -1.18
VAPB-204ENST00000475243 KIAA0087Q14695 138 aa7.66□□□□□ -1.18
VAPB-204ENST00000475243 MDFIQ99750 246 aa7.66□□□□□ -1.18
VAPB-204ENST00000475243 COX8CQ7Z4L0 72 aa7.66□□□□□ -1.18
VAPB-204ENST00000475243 SPACA4Q8TDM5 124 aa7.66□□□□□ -1.18
VAPB-204ENST00000475243 CEP350Q5VT06 3117 aa7.65□□□□□ -1.18
VAPB-204ENST00000475243 MOBPQ13875 183 aa7.64□□□□□ -1.19
VAPB-204ENST00000475243 C11orf72Q8NBR9 251 aa7.63□□□□□ -1.19
VAPB-204ENST00000475243 NHLRC4P0CG21 123 aaPredicted RBP7.63□□□□□ -1.19
VAPB-204ENST00000475243 F8WDY8 70 aa7.63□□□□□ -1.19
VAPB-204ENST00000475243 CHTF8P0CG12 524 aa7.62□□□□□ -1.19
VAPB-204ENST00000475243 C7orf65Q6ZTY9 151 aa7.62□□□□□ -1.19
VAPB-204ENST00000475243 LIMD2Q9BT23 127 aa7.62□□□□□ -1.19
VAPB-204ENST00000475243 C1orf64Q8NEQ6 169 aa7.61□□□□□ -1.19
VAPB-204ENST00000475243 KIF25-AS1Q9Y6Z4 181 aa7.6□□□□□ -1.19
VAPB-204ENST00000475243 TMEM254Q8TBM7 123 aa7.6□□□□□ -1.19
VAPB-204ENST00000475243 LINC00167Q96N53 147 aa7.6□□□□□ -1.19
VAPB-204ENST00000475243 USP24Q9UPU5 2620 aa7.6□□□□□ -1.19
VAPB-204ENST00000475243 LINC01561Q8N1V8 128 aa7.6□□□□□ -1.19
VAPB-204ENST00000475243 SMIM29Q86T20 159 aa7.6□□□□□ -1.19
VAPB-204ENST00000475243 C6orf48Q9UBA6 75 aa7.59□□□□□ -1.19
VAPB-204ENST00000475243 Q8N2B8 174 aa7.59□□□□□ -1.19
VAPB-204ENST00000475243 PHF5AQ7RTV0 110 aaKnown RBP7.59□□□□□ -1.19
VAPB-204ENST00000475243 IGHV3OR16-9A0A0B4J2B5 98 aa7.58□□□□□ -1.2
VAPB-204ENST00000475243 SPATA3Q8NHX4 192 aa7.58□□□□□ -1.2
VAPB-204ENST00000475243 CXCL6P80162 114 aa7.55□□□□□ -1.2
VAPB-204ENST00000475243 hDV103S1A0JD37 113 aa7.55□□□□□ -1.2
VAPB-204ENST00000475243 IGLV5-39A0A0G2JS06 123 aa7.54□□□□□ -1.2
VAPB-204ENST00000475243 COL4A2P08572 1712 aa7.54□□□□□ -1.2
VAPB-204ENST00000475243 LINC00315P59091 139 aa7.54□□□□□ -1.2
VAPB-204ENST00000475243 FAM218AQ96MZ4 157 aa7.53□□□□□ -1.2
VAPB-204ENST00000475243 FAM19A4Q96LR4 140 aa7.53□□□□□ -1.2
VAPB-204ENST00000475243 IGLV8-61A0A075B6I0 122 aa7.52□□□□□ -1.21
VAPB-204ENST00000475243 RPL37AP61513 92 aaKnown RBP7.51□□□□□ -1.21
VAPB-204ENST00000475243 KRTAP24-1Q3LI83 254 aa7.51□□□□□ -1.21
VAPB-204ENST00000475243 CDIP1Q9H305 208 aa7.51□□□□□ -1.21
VAPB-204ENST00000475243 A0A1B0GU69 56 aa7.51□□□□□ -1.21
VAPB-204ENST00000475243 RTL8CO15255 209 aa7.51□□□□□ -1.21
VAPB-204ENST00000475243 TYMSOSQ8TAI1 123 aa7.51□□□□□ -1.21
VAPB-204ENST00000475243 C16orf90A8MZG2 172 aa7.51□□□□□ -1.21
VAPB-204ENST00000475243 SPAG11AQ6PDA7 123 aa7.51□□□□□ -1.21
VAPB-204ENST00000475243 ST20-AS1Q8NBB2 130 aa7.5□□□□□ -1.21
VAPB-204ENST00000475243 LINC00476Q8WZB0 136 aa7.5□□□□□ -1.21
VAPB-204ENST00000475243 FAM229AH3BQW9 127 aa7.5□□□□□ -1.21
VAPB-204ENST00000475243 LINC00313P59037 77 aa7.49□□□□□ -1.21
VAPB-204ENST00000475243 LINC01546A6NGU7 62 aa7.49□□□□□ -1.21
VAPB-204ENST00000475243 EPM2AB3EWF7 344 aa7.49□□□□□ -1.21
VAPB-204ENST00000475243 LINC00588Q9Y4M8 146 aa7.48□□□□□ -1.21
VAPB-204ENST00000475243 ACYP2P14621 99 aa7.48□□□□□ -1.21
VAPB-204ENST00000475243 PLA2G1BP04054 148 aaKnown RBP7.47□□□□□ -1.21
VAPB-204ENST00000475243 ELOF1P60002 83 aaKnown RBP7.47□□□□□ -1.21
VAPB-204ENST00000475243 FAM168BA1KXE4 195 aa7.47□□□□□ -1.21
VAPB-204ENST00000475243 SMCPP49901 116 aaPredicted RBP7.46□□□□□ -1.22
VAPB-204ENST00000475243 NBDYA0A0U1RRE5 68 aa7.46□□□□□ -1.22
VAPB-204ENST00000475243 Q8NAQ8 132 aa7.45□□□□□ -1.22
VAPB-204ENST00000475243 Q96NJ1 140 aa7.45□□□□□ -1.22
VAPB-204ENST00000475243 TP53AIP1Q9HCN2 124 aa7.45□□□□□ -1.22
VAPB-204ENST00000475243 Q6ZRX8 168 aa7.45□□□□□ -1.22
VAPB-204ENST00000475243 Q6ZRP5 223 aa7.44□□□□□ -1.22
VAPB-204ENST00000475243 Q6ZQT0 140 aa7.44□□□□□ -1.22
VAPB-204ENST00000475243 IGLV5-45A0A087WSX0 123 aa7.43□□□□□ -1.22
VAPB-204ENST00000475243 H3BNG1 76 aa7.43□□□□□ -1.22
VAPB-204ENST00000475243 Q8NBF4 154 aa7.41□□□□□ -1.22
VAPB-204ENST00000475243 TM2D3Q9BRN9 247 aa7.41□□□□□ -1.22
VAPB-204ENST00000475243 C4orf26Q17RF5 130 aa7.41□□□□□ -1.22
VAPB-204ENST00000475243 CFAP54Q96N23 3096 aa7.39□□□□□ -1.23
VAPB-204ENST00000475243 BCE1O60756 84 aa7.39□□□□□ -1.23
VAPB-204ENST00000475243 TRAV22A0A0B4J277 110 aa7.38□□□□□ -1.23
VAPB-204ENST00000475243 ATP11AUNQ6ZP68 121 aa7.37□□□□□ -1.23
VAPB-204ENST00000475243 GVQW2A0A096LPI5 108 aaPredicted RBP7.37□□□□□ -1.23
VAPB-204ENST00000475243 SERTAD4-AS1Q5TG53 156 aa7.37□□□□□ -1.23
VAPB-204ENST00000475243 TRBV7-4A0A0J9YYF1 115 aa7.36□□□□□ -1.23
VAPB-204ENST00000475243 PRO0461Q9UI25 63 aa7.36□□□□□ -1.23
VAPB-204ENST00000475243 J3QL48 77 aa7.36□□□□□ -1.23
VAPB-204ENST00000475243 LOC110117498A0A087WWA1 95 aa7.35□□□□□ -1.23
VAPB-204ENST00000475243 DNAH10OSP0CZ25 163 aa7.35□□□□□ -1.23
VAPB-204ENST00000475243 CR1P17927 2039 aa7.34□□□□□ -1.23
VAPB-204ENST00000475243 LAMA2P24043 3122 aaKnown RBP7.34□□□□□ -1.23
VAPB-204ENST00000475243 WWC2-AS2Q96NR7 200 aa7.33□□□□□ -1.24
VAPB-204ENST00000475243 K7EQZ3 153 aa7.33□□□□□ -1.24
VAPB-204ENST00000475243 VPREB1P12018 145 aa7.33□□□□□ -1.24
VAPB-204ENST00000475243 MKI67P46013 3256 aaKnown RBP7.33□□□□□ -1.24
VAPB-204ENST00000475243 KRTAP10-11P60412 298 aa7.33□□□□□ -1.24
VAPB-204ENST00000475243 IGLV6-57P01721 117 aa7.32□□□□□ -1.24
VAPB-204ENST00000475243 MGAM2Q2M2H8 2515 aa7.31□□□□□ -1.24
VAPB-204ENST00000475243 EPG5Q9HCE0 2579 aa7.31□□□□□ -1.24
VAPB-204ENST00000475243 C9orf92A6NGG3 77 aa7.31□□□□□ -1.24
VAPB-204ENST00000475243 A0A1B0GW54 56 aa7.31□□□□□ -1.24
VAPB-204ENST00000475243 SMR3BP02814 79 aaPredicted RBP7.3□□□□□ -1.24
VAPB-204ENST00000475243 A0A0G2JQZ4 141 aa7.3□□□□□ -1.24
VAPB-204ENST00000475243 A0A1W2PNN7 141 aa7.3□□□□□ -1.24
VAPB-204ENST00000475243 A8MWP4 228 aa7.3□□□□□ -1.24
VAPB-204ENST00000475243 XIRP2A4UGR9 3374 aa7.3□□□□□ -1.24
VAPB-204ENST00000475243 SPINT4Q6UDR6 99 aa7.29□□□□□ -1.24
VAPB-204ENST00000475243 DSCR10P59022 87 aa7.29□□□□□ -1.24
VAPB-204ENST00000475243 PRO0628Q9UI54 55 aa7.29□□□□□ -1.24
VAPB-204ENST00000475243 CSNK1G2-AS1Q8NCQ2 148 aa7.29□□□□□ -1.24
VAPB-204ENST00000475243 K7EIL1 84 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms