RNA–Protein interactions for RNA: ENST00000475163.5

TSPAN1-206, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-206ENST00000475163 LRP1BQ9NZR2 4599 aa6.46□□□□□ -1.37
TSPAN1-206ENST00000475163 A0A1W2PNN7 141 aa6.46□□□□□ -1.38
TSPAN1-206ENST00000475163 PYY3Q5JQD4 70 aa6.46□□□□□ -1.38
TSPAN1-206ENST00000475163 SND1-IT1Q9HBX3 110 aa6.46□□□□□ -1.38
TSPAN1-206ENST00000475163 PLAC8Q9NZF1 115 aa6.46□□□□□ -1.38
TSPAN1-206ENST00000475163 SCGB1D4Q6XE38 83 aa6.45□□□□□ -1.38
TSPAN1-206ENST00000475163 PCP2Q8IVA1 136 aa6.45□□□□□ -1.38
TSPAN1-206ENST00000475163 MIR7-3HGQ8N6C7 128 aa6.45□□□□□ -1.38
TSPAN1-206ENST00000475163 VAMP8Q9BV40 100 aa6.45□□□□□ -1.38
TSPAN1-206ENST00000475163 APOBP04114 4563 aaKnown RBP6.44□□□□□ -1.38
TSPAN1-206ENST00000475163 FAM168BA1KXE4 195 aa6.44□□□□□ -1.38
TSPAN1-206ENST00000475163 SPATA45Q537H7 98 aa6.44□□□□□ -1.38
TSPAN1-206ENST00000475163 FAM19A5Q7Z5A7 132 aaPredicted RBP6.44□□□□□ -1.38
TSPAN1-206ENST00000475163 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
TSPAN1-206ENST00000475163 PAM16Q9Y3D7 125 aa6.44□□□□□ -1.38
TSPAN1-206ENST00000475163 DNAH8Q96JB1 4490 aa6.44□□□□□ -1.38
TSPAN1-206ENST00000475163 TIMM17BO60830 172 aa6.43□□□□□ -1.38
TSPAN1-206ENST00000475163 SMR3BP02814 79 aaPredicted RBP6.43□□□□□ -1.38
TSPAN1-206ENST00000475163 PLA2G2DQ9UNK4 145 aa6.43□□□□□ -1.38
TSPAN1-206ENST00000475163 EPM2AB3EWF7 344 aa6.42□□□□□ -1.38
TSPAN1-206ENST00000475163 RPL24P83731 157 aaKnown RBP6.42□□□□□ -1.38
TSPAN1-206ENST00000475163 SERTAD4-AS1Q5TG53 156 aa6.42□□□□□ -1.38
TSPAN1-206ENST00000475163 DAND5Q8N907 189 aa6.42□□□□□ -1.38
TSPAN1-206ENST00000475163 TMEM238C9JI98 176 aa6.41□□□□□ -1.38
TSPAN1-206ENST00000475163 M0QXV9 152 aa6.41□□□□□ -1.38
TSPAN1-206ENST00000475163 COX8AP10176 69 aa6.41□□□□□ -1.38
TSPAN1-206ENST00000475163 ADAMTSL4-AS1Q5T5F5 129 aa6.41□□□□□ -1.38
TSPAN1-206ENST00000475163 KRTAP7-1Q8IUC3 87 aa6.41□□□□□ -1.38
TSPAN1-206ENST00000475163 BOD1L2Q8IYS8 172 aa6.41□□□□□ -1.38
TSPAN1-206ENST00000475163 C7orf33Q8WU49 177 aa6.41□□□□□ -1.38
TSPAN1-206ENST00000475163 LITAFQ99732 161 aa6.41□□□□□ -1.38
TSPAN1-206ENST00000475163 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
TSPAN1-206ENST00000475163 LOC105371267A0A1B0GV96 52 aa6.4□□□□□ -1.38
TSPAN1-206ENST00000475163 DLEU1O43261 78 aa6.4□□□□□ -1.38
TSPAN1-206ENST00000475163 S100A12P80511 92 aa6.4□□□□□ -1.38
TSPAN1-206ENST00000475163 LBHQ53QV2 105 aaPredicted RBP6.4□□□□□ -1.38
TSPAN1-206ENST00000475163 PHF5AQ7RTV0 110 aaKnown RBP6.4□□□□□ -1.38
TSPAN1-206ENST00000475163 NKAPP1Q8N9T2 125 aa6.4□□□□□ -1.38
TSPAN1-206ENST00000475163 C14orf144Q96I85 54 aa6.4□□□□□ -1.38
TSPAN1-206ENST00000475163 C22orf24Q9Y442 160 aa6.4□□□□□ -1.38
TSPAN1-206ENST00000475163 IGLV5-37A0A075B6J1 123 aa6.39□□□□□ -1.39
TSPAN1-206ENST00000475163 LOC107984156A0A0G2JMH3 177 aa6.39□□□□□ -1.39
TSPAN1-206ENST00000475163 VPREB1P12018 145 aa6.39□□□□□ -1.39
TSPAN1-206ENST00000475163 NPC2P61916 151 aa6.39□□□□□ -1.39
TSPAN1-206ENST00000475163 ARL17AQ8IVW1 177 aa6.39□□□□□ -1.39
TSPAN1-206ENST00000475163 TP73-AS1Q9UF72 201 aa6.39□□□□□ -1.39
TSPAN1-206ENST00000475163 UBE2BP63146 152 aa6.38□□□□□ -1.39
TSPAN1-206ENST00000475163 SLC25A34Q6PIV7 304 aa6.38□□□□□ -1.39
TSPAN1-206ENST00000475163 Q6ZVH6 145 aa6.38□□□□□ -1.39
TSPAN1-206ENST00000475163 MRPL55Q7Z7F7 128 aaKnown RBP6.38□□□□□ -1.39
TSPAN1-206ENST00000475163 LINC00308Q8TCZ7 52 aa6.38□□□□□ -1.39
TSPAN1-206ENST00000475163 SPANXDQ9BXN6 97 aa6.38□□□□□ -1.39
TSPAN1-206ENST00000475163 CDIP1Q9H305 208 aa6.38□□□□□ -1.39
TSPAN1-206ENST00000475163 SPANXCQ9NY87 97 aa6.38□□□□□ -1.39
TSPAN1-206ENST00000475163 SMIM6P0DI80 62 aa6.37□□□□□ -1.39
TSPAN1-206ENST00000475163 SRSF9Q13242 221 aaKnown RBP eCLIP6.37□□□□□ -1.39
TSPAN1-206ENST00000475163 SOSTDC1Q6X4U4 206 aa6.37□□□□□ -1.39
TSPAN1-206ENST00000475163 Q8N1X5 172 aa6.37□□□□□ -1.39
TSPAN1-206ENST00000475163 Q8NDZ9 215 aa6.37□□□□□ -1.39
TSPAN1-206ENST00000475163 COPS9Q8WXC6 57 aa6.37□□□□□ -1.39
TSPAN1-206ENST00000475163 GAGE10A6NGK3 116 aa6.36□□□□□ -1.39
TSPAN1-206ENST00000475163 NDUFC2O95298 119 aa6.36□□□□□ -1.39
TSPAN1-206ENST00000475163 IFITM1P13164 125 aa6.36□□□□□ -1.39
TSPAN1-206ENST00000475163 RPL37AP61513 92 aaKnown RBP6.36□□□□□ -1.39
TSPAN1-206ENST00000475163 LINC00167Q96N53 147 aa6.36□□□□□ -1.39
TSPAN1-206ENST00000475163 SPANXB1Q9NS25 103 aaPredicted RBP6.36□□□□□ -1.39
TSPAN1-206ENST00000475163 M0R378 163 aa6.35□□□□□ -1.39
TSPAN1-206ENST00000475163 NCR3O14931 201 aa6.35□□□□□ -1.39
TSPAN1-206ENST00000475163 PLA2G1BP04054 148 aaKnown RBP6.35□□□□□ -1.39
TSPAN1-206ENST00000475163 PRR3P79522 188 aaKnown RBP6.35□□□□□ -1.39
TSPAN1-206ENST00000475163 Q5VSD8 79 aa6.35□□□□□ -1.39
TSPAN1-206ENST00000475163 MUSTN1Q8IVN3 82 aa6.35□□□□□ -1.39
TSPAN1-206ENST00000475163 RPL37AP8A6NKH3 93 aa6.34□□□□□ -1.39
TSPAN1-206ENST00000475163 H3BS24 57 aa6.34□□□□□ -1.39
TSPAN1-206ENST00000475163 PPDPFQ9H3Y8 114 aa6.34□□□□□ -1.39
TSPAN1-206ENST00000475163 HIGD1BQ9P298 99 aa6.34□□□□□ -1.39
TSPAN1-206ENST00000475163 TRBV10-2A0A0K0K1G8 114 aa6.33□□□□□ -1.4
TSPAN1-206ENST00000475163 KRTAP11-1Q8IUC1 163 aa6.33□□□□□ -1.4
TSPAN1-206ENST00000475163 HIST1H4GQ99525 98 aa6.33□□□□□ -1.4
TSPAN1-206ENST00000475163 UQCR10Q9UDW1 63 aa6.33□□□□□ -1.4
TSPAN1-206ENST00000475163 PSORS1C2Q9UIG4 136 aa6.33□□□□□ -1.4
TSPAN1-206ENST00000475163 IGLV1-50A0A075B6I6 118 aa6.32□□□□□ -1.4
TSPAN1-206ENST00000475163 IGKV2-28A0A075B6P5 120 aa6.32□□□□□ -1.4
TSPAN1-206ENST00000475163 IGKV2D-28P01615 120 aa6.32□□□□□ -1.4
TSPAN1-206ENST00000475163 C1orf137Q5JT78 98 aa6.32□□□□□ -1.4
TSPAN1-206ENST00000475163 C2orf91Q6ZV80 131 aa6.32□□□□□ -1.4
TSPAN1-206ENST00000475163 LINC00518Q8N0U6 118 aa6.32□□□□□ -1.4
TSPAN1-206ENST00000475163 S100A7L2Q5SY68 101 aa6.31□□□□□ -1.4
TSPAN1-206ENST00000475163 TRBV10-3A0A0K0K1G6 114 aa6.3□□□□□ -1.4
TSPAN1-206ENST00000475163 DDTP30046 118 aa6.3□□□□□ -1.4
TSPAN1-206ENST00000475163 C12orf57Q99622 126 aa6.3□□□□□ -1.4
TSPAN1-206ENST00000475163 PRO1933Q9H354 126 aa6.3□□□□□ -1.4
TSPAN1-206ENST00000475163 KRTAP10-4P60372 401 aaPredicted RBP6.29□□□□□ -1.4
TSPAN1-206ENST00000475163 TAL2Q16559 108 aa6.29□□□□□ -1.4
TSPAN1-206ENST00000475163 REG3GQ6UW15 175 aa6.29□□□□□ -1.4
TSPAN1-206ENST00000475163 OR13C6PQ8NH95 151 aa6.29□□□□□ -1.4
TSPAN1-206ENST00000475163 A4D1N5 150 aa6.28□□□□□ -1.4
TSPAN1-206ENST00000475163 PRYO14603 147 aa6.28□□□□□ -1.4
TSPAN1-206ENST00000475163 BCE1O60756 84 aa6.28□□□□□ -1.4
TSPAN1-206ENST00000475163 IGLV6-57P01721 117 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms