RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 PTTG1IPP53801 180 aa7.49□□□□□ -1.21
CLIP2-204ENST00000474962 HERV-K104P63124 156 aa7.49□□□□□ -1.21
CLIP2-204ENST00000474962 CIRBPQ14011 172 aaKnown RBP7.49□□□□□ -1.21
CLIP2-204ENST00000474962 STPG4Q8N801 248 aa7.49□□□□□ -1.21
CLIP2-204ENST00000474962 UBR4Q5T4S7 5183 aa7.48□□□□□ -1.21
CLIP2-204ENST00000474962 LINC00587B1AMM8 73 aa7.48□□□□□ -1.21
CLIP2-204ENST00000474962 E9PLD3 99 aa7.48□□□□□ -1.21
CLIP2-204ENST00000474962 PFN2P35080 140 aa7.48□□□□□ -1.21
CLIP2-204ENST00000474962 NMUP48645 174 aa7.48□□□□□ -1.21
CLIP2-204ENST00000474962 MEIG1Q5JSS6 88 aa7.48□□□□□ -1.21
CLIP2-204ENST00000474962 ATOH7Q8N100 152 aa7.48□□□□□ -1.21
CLIP2-204ENST00000474962 LINC00158P58513 81 aa7.47□□□□□ -1.21
CLIP2-204ENST00000474962 COX17Q14061 63 aa7.47□□□□□ -1.21
CLIP2-204ENST00000474962 Q6ZRP5 223 aa7.47□□□□□ -1.21
CLIP2-204ENST00000474962 SPACA4Q8TDM5 124 aa7.47□□□□□ -1.21
CLIP2-204ENST00000474962 ERG28Q9UKR5 140 aa7.47□□□□□ -1.21
CLIP2-204ENST00000474962 SERTAD4-AS1Q5TG53 156 aa7.46□□□□□ -1.22
CLIP2-204ENST00000474962 A0A0U1RRA0 63 aa7.44□□□□□ -1.22
CLIP2-204ENST00000474962 XAGE1AQ9HD64 81 aa7.44□□□□□ -1.22
CLIP2-204ENST00000474962 PLAC8Q9NZF1 115 aa7.44□□□□□ -1.22
CLIP2-204ENST00000474962 TSPEAR-AS2P59090 65 aa7.43□□□□□ -1.22
CLIP2-204ENST00000474962 ZNF815PA8K554 130 aa7.42□□□□□ -1.22
CLIP2-204ENST00000474962 SMIM13P0DJ93 91 aa7.42□□□□□ -1.22
CLIP2-204ENST00000474962 MT1HL1P0DM35 61 aa7.42□□□□□ -1.22
CLIP2-204ENST00000474962 C7orf33Q8WU49 177 aa7.42□□□□□ -1.22
CLIP2-204ENST00000474962 C9orf129Q5T035 196 aaKnown RBP7.41□□□□□ -1.22
CLIP2-204ENST00000474962 FAM19A5Q7Z5A7 132 aaPredicted RBP7.41□□□□□ -1.22
CLIP2-204ENST00000474962 TNXBP22105 4242 aa7.4□□□□□ -1.22
CLIP2-204ENST00000474962 IGKV2D-26A0A0A0MRZ7 120 aa7.4□□□□□ -1.22
CLIP2-204ENST00000474962 A0A1W2PNN7 141 aa7.4□□□□□ -1.22
CLIP2-204ENST00000474962 SCGB1D4Q6XE38 83 aa7.4□□□□□ -1.22
CLIP2-204ENST00000474962 SND1-IT1Q9HBX3 110 aa7.4□□□□□ -1.22
CLIP2-204ENST00000474962 A0A0J9YXY3 114 aa7.39□□□□□ -1.23
CLIP2-204ENST00000474962 FAM168BA1KXE4 195 aa7.39□□□□□ -1.23
CLIP2-204ENST00000474962 RPL24P83731 157 aaKnown RBP7.39□□□□□ -1.23
CLIP2-204ENST00000474962 JOSD1Q15040 202 aaPredicted RBP7.39□□□□□ -1.23
CLIP2-204ENST00000474962 MIR7-3HGQ8N6C7 128 aa7.39□□□□□ -1.23
CLIP2-204ENST00000474962 NKAPP1Q8N9T2 125 aa7.39□□□□□ -1.23
CLIP2-204ENST00000474962 MIEN1Q9BRT3 115 aa7.39□□□□□ -1.23
CLIP2-204ENST00000474962 PLA2G2DQ9UNK4 145 aa7.39□□□□□ -1.23
CLIP2-204ENST00000474962 H3BS24 57 aa7.38□□□□□ -1.23
CLIP2-204ENST00000474962 M0QXV9 152 aa7.38□□□□□ -1.23
CLIP2-204ENST00000474962 TTTY13Q9BZ97 58 aa7.38□□□□□ -1.23
CLIP2-204ENST00000474962 UBE2BP63146 152 aa7.37□□□□□ -1.23
CLIP2-204ENST00000474962 LBHQ53QV2 105 aaPredicted RBP7.37□□□□□ -1.23
CLIP2-204ENST00000474962 VAMP8Q9BV40 100 aa7.37□□□□□ -1.23
CLIP2-204ENST00000474962 PHF5AQ7RTV0 110 aaKnown RBP7.36□□□□□ -1.23
CLIP2-204ENST00000474962 PCP2Q8IVA1 136 aa7.36□□□□□ -1.23
CLIP2-204ENST00000474962 DAND5Q8N907 189 aa7.36□□□□□ -1.23
CLIP2-204ENST00000474962 TMEM238C9JI98 176 aa7.35□□□□□ -1.23
CLIP2-204ENST00000474962 TIMM17BO60830 172 aa7.35□□□□□ -1.23
CLIP2-204ENST00000474962 PRR3P79522 188 aaKnown RBP7.35□□□□□ -1.23
CLIP2-204ENST00000474962 BOD1L2Q8IYS8 172 aa7.35□□□□□ -1.23
CLIP2-204ENST00000474962 PAM16Q9Y3D7 125 aa7.35□□□□□ -1.23
CLIP2-204ENST00000474962 C22orf24Q9Y442 160 aa7.35□□□□□ -1.23
CLIP2-204ENST00000474962 SPATA45Q537H7 98 aa7.34□□□□□ -1.23
CLIP2-204ENST00000474962 COPS9Q8WXC6 57 aa7.34□□□□□ -1.23
CLIP2-204ENST00000474962 NPC2P61916 151 aa7.33□□□□□ -1.24
CLIP2-204ENST00000474962 S100A12P80511 92 aa7.33□□□□□ -1.24
CLIP2-204ENST00000474962 PYY3Q5JQD4 70 aa7.33□□□□□ -1.24
CLIP2-204ENST00000474962 MRPL55Q7Z7F7 128 aaKnown RBP7.33□□□□□ -1.24
CLIP2-204ENST00000474962 TP73-AS1Q9UF72 201 aa7.33□□□□□ -1.24
CLIP2-204ENST00000474962 ADAMTSL4-AS1Q5T5F5 129 aa7.32□□□□□ -1.24
CLIP2-204ENST00000474962 LINC01600Q96MT4 127 aa7.32□□□□□ -1.24
CLIP2-204ENST00000474962 IGLV5-37A0A075B6J1 123 aa7.31□□□□□ -1.24
CLIP2-204ENST00000474962 GAGE10A6NGK3 116 aa7.31□□□□□ -1.24
CLIP2-204ENST00000474962 COX8AP10176 69 aa7.31□□□□□ -1.24
CLIP2-204ENST00000474962 VPREB1P12018 145 aa7.31□□□□□ -1.24
CLIP2-204ENST00000474962 SRSF9Q13242 221 aaKnown RBP eCLIP7.31□□□□□ -1.24
CLIP2-204ENST00000474962 KRTAP7-1Q8IUC3 87 aa7.31□□□□□ -1.24
CLIP2-204ENST00000474962 LINC00167Q96N53 147 aa7.31□□□□□ -1.24
CLIP2-204ENST00000474962 LRP2P98164 4655 aa7.3□□□□□ -1.24
CLIP2-204ENST00000474962 LOC107984156A0A0G2JMH3 177 aa7.3□□□□□ -1.24
CLIP2-204ENST00000474962 M0R378 163 aa7.3□□□□□ -1.24
CLIP2-204ENST00000474962 Q6ZVH6 145 aa7.3□□□□□ -1.24
CLIP2-204ENST00000474962 ARL17AQ8IVW1 177 aa7.3□□□□□ -1.24
CLIP2-204ENST00000474962 LINC00308Q8TCZ7 52 aa7.3□□□□□ -1.24
CLIP2-204ENST00000474962 C14orf144Q96I85 54 aa7.3□□□□□ -1.24
CLIP2-204ENST00000474962 RPL37AP8A6NKH3 93 aa7.29□□□□□ -1.24
CLIP2-204ENST00000474962 IFITM1P13164 125 aa7.29□□□□□ -1.24
CLIP2-204ENST00000474962 C1orf137Q5JT78 98 aa7.29□□□□□ -1.24
CLIP2-204ENST00000474962 SLC25A34Q6PIV7 304 aa7.29□□□□□ -1.24
CLIP2-204ENST00000474962 SPINK6Q6UWN8 80 aa7.29□□□□□ -1.24
CLIP2-204ENST00000474962 LITAFQ99732 161 aa7.29□□□□□ -1.24
CLIP2-204ENST00000474962 SPANXDQ9BXN6 97 aa7.29□□□□□ -1.24
CLIP2-204ENST00000474962 SPANXCQ9NY87 97 aa7.29□□□□□ -1.24
CLIP2-204ENST00000474962 RNF213Q63HN8 5207 aa7.28□□□□□ -1.24
CLIP2-204ENST00000474962 NCR3O14931 201 aa7.28□□□□□ -1.24
CLIP2-204ENST00000474962 DLEU1O43261 78 aa7.28□□□□□ -1.24
CLIP2-204ENST00000474962 NDUFC2O95298 119 aa7.28□□□□□ -1.24
CLIP2-204ENST00000474962 PSORS1C2Q9UIG4 136 aa7.28□□□□□ -1.24
CLIP2-204ENST00000474962 IGKV2-28A0A075B6P5 120 aa7.27□□□□□ -1.25
CLIP2-204ENST00000474962 IGKV2D-28P01615 120 aa7.27□□□□□ -1.25
CLIP2-204ENST00000474962 KRTAP10-8P60410 259 aa7.27□□□□□ -1.25
CLIP2-204ENST00000474962 S100A7L2Q5SY68 101 aa7.27□□□□□ -1.25
CLIP2-204ENST00000474962 SPANXB1Q9NS25 103 aaPredicted RBP7.27□□□□□ -1.25
CLIP2-204ENST00000474962 SOSTDC1Q6X4U4 206 aa7.26□□□□□ -1.25
CLIP2-204ENST00000474962 MUSTN1Q8IVN3 82 aa7.26□□□□□ -1.25
CLIP2-204ENST00000474962 LINC00518Q8N0U6 118 aa7.26□□□□□ -1.25
CLIP2-204ENST00000474962 HIST1H4GQ99525 98 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms