RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 LBHQ53QV2 105 aaPredicted RBP12.92□□□□□ -0.34
TOP3A-204ENST00000472959 TP73-AS1Q9UF72 201 aa12.92□□□□□ -0.34
TOP3A-204ENST00000472959 C22orf24Q9Y442 160 aa12.92□□□□□ -0.34
TOP3A-204ENST00000472959 ABCA13Q86UQ4 5058 aa12.91□□□□□ -0.34
TOP3A-204ENST00000472959 A0A0U1RRA0 63 aa12.9□□□□□ -0.34
TOP3A-204ENST00000472959 IGLV5-37A0A075B6J1 123 aa12.89□□□□□ -0.35
TOP3A-204ENST00000472959 UBE2BP63146 152 aa12.88□□□□□ -0.35
TOP3A-204ENST00000472959 MRPL55Q7Z7F7 128 aaKnown RBP12.88□□□□□ -0.35
TOP3A-204ENST00000472959 RPL24P83731 157 aaKnown RBP12.87□□□□□ -0.35
TOP3A-204ENST00000472959 ATOH7Q8N100 152 aa12.87□□□□□ -0.35
TOP3A-204ENST00000472959 MIR7-3HGQ8N6C7 128 aa12.87□□□□□ -0.35
TOP3A-204ENST00000472959 PSORS1C2Q9UIG4 136 aa12.87□□□□□ -0.35
TOP3A-204ENST00000472959 NKAPP1Q8N9T2 125 aa12.86□□□□□ -0.35
TOP3A-204ENST00000472959 IGKV2D-26A0A0A0MRZ7 120 aa12.85□□□□□ -0.35
TOP3A-204ENST00000472959 A0A0J9YXY3 114 aa12.84□□□□□ -0.35
TOP3A-204ENST00000472959 VPREB1P12018 145 aa12.84□□□□□ -0.35
TOP3A-204ENST00000472959 HNRNPA3P51991 378 aaKnown RBP12.83□□□□□ -0.36
TOP3A-204ENST00000472959 ANKRD39Q53RE8 183 aa12.83□□□□□ -0.36
TOP3A-204ENST00000472959 KRTAP11-1Q8IUC1 163 aa12.83□□□□□ -0.36
TOP3A-204ENST00000472959 ZNF815PA8K554 130 aa12.82□□□□□ -0.36
TOP3A-204ENST00000472959 C1orf137Q5JT78 98 aa12.82□□□□□ -0.36
TOP3A-204ENST00000472959 LINC00167Q96N53 147 aa12.82□□□□□ -0.36
TOP3A-204ENST00000472959 LOC107984156A0A0G2JMH3 177 aa12.8□□□□□ -0.36
TOP3A-204ENST00000472959 ARL17AQ8IVW1 177 aa12.8□□□□□ -0.36
TOP3A-204ENST00000472959 BOD1L2Q8IYS8 172 aa12.8□□□□□ -0.36
TOP3A-204ENST00000472959 HSBP1L1C9JCN9 74 aa12.79□□□□□ -0.36
TOP3A-204ENST00000472959 TIMM17BO60830 172 aa12.79□□□□□ -0.36
TOP3A-204ENST00000472959 SCGB1D1O95968 90 aa12.79□□□□□ -0.36
TOP3A-204ENST00000472959 DAND5Q8N907 189 aa12.79□□□□□ -0.36
TOP3A-204ENST00000472959 GAGE10A6NGK3 116 aa12.78□□□□□ -0.36
TOP3A-204ENST00000472959 Q8NDZ9 215 aa12.78□□□□□ -0.36
TOP3A-204ENST00000472959 TTTY13Q9BZ97 58 aa12.78□□□□□ -0.36
TOP3A-204ENST00000472959 FLG2Q5D862 2391 aaPredicted RBP12.78□□□□□ -0.36
TOP3A-204ENST00000472959 RPL37AP8A6NKH3 93 aa12.77□□□□□ -0.37
TOP3A-204ENST00000472959 SRSF9Q13242 221 aaKnown RBP eCLIP12.77□□□□□ -0.37
TOP3A-204ENST00000472959 SPINK6Q6UWN8 80 aa12.77□□□□□ -0.37
TOP3A-204ENST00000472959 MIEN1Q9BRT3 115 aa12.77□□□□□ -0.37
TOP3A-204ENST00000472959 IGLV7-43P04211 117 aa12.76□□□□□ -0.37
TOP3A-204ENST00000472959 ADAMTSL4-AS1Q5T5F5 129 aa12.76□□□□□ -0.37
TOP3A-204ENST00000472959 M0R378 163 aa12.75□□□□□ -0.37
TOP3A-204ENST00000472959 LITAFQ99732 161 aa12.75□□□□□ -0.37
TOP3A-204ENST00000472959 TMA7Q9Y2S6 64 aaKnown RBP12.74□□□□□ -0.37
TOP3A-204ENST00000472959 IGLV1-50A0A075B6I6 118 aa12.73□□□□□ -0.37
TOP3A-204ENST00000472959 SCGB1D4Q6XE38 83 aa12.73□□□□□ -0.37
TOP3A-204ENST00000472959 PCP2Q8IVA1 136 aa12.73□□□□□ -0.37
TOP3A-204ENST00000472959 IGKV2-28A0A075B6P5 120 aa12.71□□□□□ -0.37
TOP3A-204ENST00000472959 IGKV2D-28P01615 120 aa12.71□□□□□ -0.37
TOP3A-204ENST00000472959 BCE1O60756 84 aa12.7□□□□□ -0.38
TOP3A-204ENST00000472959 NDUFC2O95298 119 aa12.7□□□□□ -0.38
TOP3A-204ENST00000472959 OXTP01178 125 aa12.7□□□□□ -0.38
TOP3A-204ENST00000472959 PKHD1L1Q86WI1 4243 aa12.7□□□□□ -0.38
TOP3A-204ENST00000472959 TRBV10-2A0A0K0K1G8 114 aa12.69□□□□□ -0.38
TOP3A-204ENST00000472959 KRTAP29-1A8MX34 341 aaPredicted RBP12.69□□□□□ -0.38
TOP3A-204ENST00000472959 TMEM238C9JI98 176 aa12.69□□□□□ -0.38
TOP3A-204ENST00000472959 SOSTDC1Q6X4U4 206 aa12.69□□□□□ -0.38
TOP3A-204ENST00000472959 NCR3O14931 201 aa12.68□□□□□ -0.38
TOP3A-204ENST00000472959 JOSD1Q15040 202 aaPredicted RBP12.68□□□□□ -0.38
TOP3A-204ENST00000472959 LINC00308Q8TCZ7 52 aa12.68□□□□□ -0.38
TOP3A-204ENST00000472959 DIRC1Q969H9 104 aa12.68□□□□□ -0.38
TOP3A-204ENST00000472959 SPANXB1Q9NS25 103 aaPredicted RBP12.68□□□□□ -0.38
TOP3A-204ENST00000472959 ZNF861PO60384 105 aa12.67□□□□□ -0.38
TOP3A-204ENST00000472959 NPC2P61916 151 aa12.67□□□□□ -0.38
TOP3A-204ENST00000472959 REG3GQ6UW15 175 aa12.67□□□□□ -0.38
TOP3A-204ENST00000472959 MYCBP2O75592 4640 aa12.66□□□□□ -0.38
TOP3A-204ENST00000472959 EIF4EBP3O60516 100 aaPredicted RBP12.66□□□□□ -0.38
TOP3A-204ENST00000472959 Q6ZVH6 145 aa12.66□□□□□ -0.38
TOP3A-204ENST00000472959 SPANXDQ9BXN6 97 aa12.66□□□□□ -0.38
TOP3A-204ENST00000472959 SPANXCQ9NY87 97 aa12.66□□□□□ -0.38
TOP3A-204ENST00000472959 RPL28P46779 137 aaKnown RBP12.65□□□□□ -0.38
TOP3A-204ENST00000472959 COPS9Q8WXC6 57 aa12.65□□□□□ -0.38
TOP3A-204ENST00000472959 TMEM126AQ9H061 195 aa12.65□□□□□ -0.38
TOP3A-204ENST00000472959 IFITM1P13164 125 aa12.63□□□□□ -0.39
TOP3A-204ENST00000472959 S100A12P80511 92 aa12.63□□□□□ -0.39
TOP3A-204ENST00000472959 PPDPFQ9H3Y8 114 aa12.63□□□□□ -0.39
TOP3A-204ENST00000472959 TRBV10-3A0A0K0K1G6 114 aa12.62□□□□□ -0.39
TOP3A-204ENST00000472959 H0Y9J4 135 aa12.62□□□□□ -0.39
TOP3A-204ENST00000472959 J3QL48 77 aa12.62□□□□□ -0.39
TOP3A-204ENST00000472959 PRYO14603 147 aa12.62□□□□□ -0.39
TOP3A-204ENST00000472959 KCNQ1DNQ9H478 68 aa12.62□□□□□ -0.39
TOP3A-204ENST00000472959 UBE2AP49459 152 aa12.61□□□□□ -0.39
TOP3A-204ENST00000472959 COX8AP10176 69 aa12.6□□□□□ -0.39
TOP3A-204ENST00000472959 DDTP30046 118 aa12.6□□□□□ -0.39
TOP3A-204ENST00000472959 S100A7L2Q5SY68 101 aa12.6□□□□□ -0.39
TOP3A-204ENST00000472959 VAMP8Q9BV40 100 aa12.6□□□□□ -0.39
TOP3A-204ENST00000472959 KRTAP13-1Q8IUC0 172 aa12.59□□□□□ -0.39
TOP3A-204ENST00000472959 IGLV6-57P01721 117 aa12.58□□□□□ -0.4
TOP3A-204ENST00000472959 FAM19A1Q7Z5A9 133 aa12.58□□□□□ -0.4
TOP3A-204ENST00000472959 LINC00518Q8N0U6 118 aa12.58□□□□□ -0.4
TOP3A-204ENST00000472959 LINC01600Q96MT4 127 aa12.58□□□□□ -0.4
TOP3A-204ENST00000472959 PAM16Q9Y3D7 125 aa12.58□□□□□ -0.4
TOP3A-204ENST00000472959 DLEU1O43261 78 aa12.57□□□□□ -0.4
TOP3A-204ENST00000472959 SPATA45Q537H7 98 aa12.57□□□□□ -0.4
TOP3A-204ENST00000472959 SPRR1AP35321 89 aa12.56□□□□□ -0.4
TOP3A-204ENST00000472959 PYY3Q5JQD4 70 aa12.56□□□□□ -0.4
TOP3A-204ENST00000472959 LINC00337Q8N6G1 96 aa12.56□□□□□ -0.4
TOP3A-204ENST00000472959 CBY1Q9Y3M2 126 aa12.56□□□□□ -0.4
TOP3A-204ENST00000472959 DMBT1Q9UGM3 2413 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-204ENST00000472959 MUSTN1Q8IVN3 82 aa12.55□□□□□ -0.4
TOP3A-204ENST00000472959 LRP1Q07954 4544 aaKnown RBP12.55□□□□□ -0.4
TOP3A-204ENST00000472959 PRLHP81277 87 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms