RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ADCYAP1P18509 176 aa5.23□□□□□ -1.57
VCL-204ENST00000472585 SPAG11AQ6PDA7 123 aa5.23□□□□□ -1.57
VCL-204ENST00000472585 COX7B2Q8TF08 81 aa5.23□□□□□ -1.57
VCL-204ENST00000472585 TMEM126AQ9H061 195 aa5.23□□□□□ -1.57
VCL-204ENST00000472585 VPREB1P12018 145 aa5.22□□□□□ -1.57
VCL-204ENST00000472585 FAM19A1Q7Z5A9 133 aa5.22□□□□□ -1.57
VCL-204ENST00000472585 MAP1LC3AQ9H492 121 aa5.22□□□□□ -1.57
VCL-204ENST00000472585 IGLV5-45A0A087WSX0 123 aa5.21□□□□□ -1.58
VCL-204ENST00000472585 B5MCH6 92 aa5.21□□□□□ -1.58
VCL-204ENST00000472585 SPINK8P0C7L1 97 aa5.21□□□□□ -1.58
VCL-204ENST00000472585 CXCL5P42830 114 aa5.21□□□□□ -1.58
VCL-204ENST00000472585 ORMDL2Q53FV1 153 aa5.21□□□□□ -1.58
VCL-204ENST00000472585 PDZD11Q5EBL8 140 aa5.21□□□□□ -1.58
VCL-204ENST00000472585 CLLU1Q5K131 121 aa5.21□□□□□ -1.58
VCL-204ENST00000472585 ATP5L2Q7Z4Y8 100 aa5.21□□□□□ -1.58
VCL-204ENST00000472585 DAND5Q8N907 189 aa5.21□□□□□ -1.58
VCL-204ENST00000472585 NKAPP1Q8N9T2 125 aa5.21□□□□□ -1.58
VCL-204ENST00000472585 TOMM6Q96B49 74 aa5.21□□□□□ -1.58
VCL-204ENST00000472585 GEMIN7Q9H840 131 aaKnown RBP5.21□□□□□ -1.58
VCL-204ENST00000472585 LAMTOR2Q9Y2Q5 125 aa5.21□□□□□ -1.58
VCL-204ENST00000472585 TIMM17AQ99595 171 aa5.2□□□□□ -1.58
VCL-204ENST00000472585 TINCRA0A1B0GVN0 87 aa5.19□□□□□ -1.58
VCL-204ENST00000472585 SEC11AP67812 179 aa5.19□□□□□ -1.58
VCL-204ENST00000472585 MT1HP80294 61 aa5.19□□□□□ -1.58
VCL-204ENST00000472585 SPRR4Q96PI1 79 aa5.19□□□□□ -1.58
VCL-204ENST00000472585 PFN2P35080 140 aa5.18□□□□□ -1.58
VCL-204ENST00000472585 ERASQ7Z444 233 aa5.18□□□□□ -1.58
VCL-204ENST00000472585 CBLN2Q8IUK8 224 aa5.18□□□□□ -1.58
VCL-204ENST00000472585 CST9LQ9H4G1 147 aa5.18□□□□□ -1.58
VCL-204ENST00000472585 SND1-IT1Q9HBX3 110 aa5.18□□□□□ -1.58
VCL-204ENST00000472585 K7EMI3 77 aa5.17□□□□□ -1.58
VCL-204ENST00000472585 M0R2T5 61 aa5.17□□□□□ -1.58
VCL-204ENST00000472585 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
VCL-204ENST00000472585 RAB14P61106 215 aa5.17□□□□□ -1.58
VCL-204ENST00000472585 PEA15Q15121 130 aa5.17□□□□□ -1.58
VCL-204ENST00000472585 Q8NBF4 154 aa5.17□□□□□ -1.58
VCL-204ENST00000472585 HIGD2AQ9BW72 106 aa5.17□□□□□ -1.58
VCL-204ENST00000472585 NXT2Q9NPJ8 142 aaKnown RBP5.17□□□□□ -1.58
VCL-204ENST00000472585 NDUFA12Q9UI09 145 aa5.17□□□□□ -1.58
VCL-204ENST00000472585 IGLV5-39A0A0G2JS06 123 aa5.16□□□□□ -1.58
VCL-204ENST00000472585 KIAA1644Q3SXP7 199 aa5.16□□□□□ -1.58
VCL-204ENST00000472585 SCGB3A1Q96QR1 104 aa5.16□□□□□ -1.58
VCL-204ENST00000472585 PAPPA-AS1Q5QFB9 102 aa5.15□□□□□ -1.59
VCL-204ENST00000472585 LINC01546A6NGU7 62 aa5.14□□□□□ -1.59
VCL-204ENST00000472585 COMMD7Q86VX2 200 aa5.14□□□□□ -1.59
VCL-204ENST00000472585 ZNF625Q96I27 306 aaPredicted RBP5.14□□□□□ -1.59
VCL-204ENST00000472585 GNB1LQ9BYB4 327 aa5.14□□□□□ -1.59
VCL-204ENST00000472585 ATP5LO75964 103 aa5.13□□□□□ -1.59
VCL-204ENST00000472585 Q8N377 158 aa5.13□□□□□ -1.59
VCL-204ENST00000472585 ERG28Q9UKR5 140 aa5.13□□□□□ -1.59
VCL-204ENST00000472585 KRTAP4-16G5E9R7 235 aaPredicted RBP5.12□□□□□ -1.59
VCL-204ENST00000472585 SPINK1P00995 79 aa5.12□□□□□ -1.59
VCL-204ENST00000472585 PMVKQ15126 192 aa5.12□□□□□ -1.59
VCL-204ENST00000472585 FAM19A2Q8N3H0 131 aa5.12□□□□□ -1.59
VCL-204ENST00000472585 SMCR5Q8TEV8 140 aa5.12□□□□□ -1.59
VCL-204ENST00000472585 IGLC3P0DOY3 106 aa5.11□□□□□ -1.59
VCL-204ENST00000472585 ZNF22P17026 224 aaPredicted RBP5.11□□□□□ -1.59
VCL-204ENST00000472585 RPL24P83731 157 aaKnown RBP5.11□□□□□ -1.59
VCL-204ENST00000472585 UQCC3Q6UW78 93 aa5.11□□□□□ -1.59
VCL-204ENST00000472585 A0A096LNJ9 63 aa5.1□□□□□ -1.59
VCL-204ENST00000472585 ERC2-IT1O76042 136 aa5.1□□□□□ -1.59
VCL-204ENST00000472585 G0S2P27469 103 aa5.1□□□□□ -1.59
VCL-204ENST00000472585 SPRR1AP35321 89 aa5.1□□□□□ -1.59
VCL-204ENST00000472585 COX17Q14061 63 aa5.1□□□□□ -1.59
VCL-204ENST00000472585 LINC00483Q53H64 154 aa5.1□□□□□ -1.59
VCL-204ENST00000472585 IGLV8-61A0A075B6I0 122 aa5.09□□□□□ -1.59
VCL-204ENST00000472585 MT-ND4LP03901 98 aa5.09□□□□□ -1.59
VCL-204ENST00000472585 A0A0U1RRA0 63 aa5.08□□□□□ -1.6
VCL-204ENST00000472585 H3BRM9 83 aa5.08□□□□□ -1.6
VCL-204ENST00000472585 GAGE2AQ6NT46 116 aa5.08□□□□□ -1.6
VCL-204ENST00000472585 URB1-AS1Q96HZ7 61 aa5.08□□□□□ -1.6
VCL-204ENST00000472585 ZNF706Q9Y5V0 76 aaPredicted RBP5.08□□□□□ -1.6
VCL-204ENST00000472585 TMEM218A2RU14 115 aa5.07□□□□□ -1.6
VCL-204ENST00000472585 C11orf86A6NJI1 115 aa5.07□□□□□ -1.6
VCL-204ENST00000472585 MOBPQ13875 183 aa5.07□□□□□ -1.6
VCL-204ENST00000472585 PCOTHQ58A44 107 aa5.07□□□□□ -1.6
VCL-204ENST00000472585 C10orf91Q5T1B1 145 aa5.07□□□□□ -1.6
VCL-204ENST00000472585 KCNQ1DNQ9H478 68 aa5.07□□□□□ -1.6
VCL-204ENST00000472585 IGLV9-49A0A0B4J1Y8 123 aa5.06□□□□□ -1.6
VCL-204ENST00000472585 SLC25A20O43772 301 aa5.06□□□□□ -1.6
VCL-204ENST00000472585 RPS29P62273 56 aaKnown RBP5.06□□□□□ -1.6
VCL-204ENST00000472585 COX6B2Q6YFQ2 88 aa5.06□□□□□ -1.6
VCL-204ENST00000472585 TRBV10-3A0A0K0K1G6 114 aa5.05□□□□□ -1.6
VCL-204ENST00000472585 PRYO14603 147 aa5.05□□□□□ -1.6
VCL-204ENST00000472585 NCR3O14931 201 aa5.05□□□□□ -1.6
VCL-204ENST00000472585 NDUFA6P56556 154 aa5.05□□□□□ -1.6
VCL-204ENST00000472585 LINC00158P58513 81 aa5.05□□□□□ -1.6
VCL-204ENST00000472585 SSBP3-AS1Q7Z2R9 100 aa5.05□□□□□ -1.6
VCL-204ENST00000472585 Q9BRP9 147 aa5.05□□□□□ -1.6
VCL-204ENST00000472585 SEC11CQ9BY50 192 aa5.05□□□□□ -1.6
VCL-204ENST00000472585 FLGP20930 4061 aaPredicted RBP5.05□□□□□ -1.6
VCL-204ENST00000472585 LINC01549A6NIU2 74 aa5.04□□□□□ -1.6
VCL-204ENST00000472585 SMIM13P0DJ93 91 aa5.04□□□□□ -1.6
VCL-204ENST00000472585 PMCHL1Q16048 86 aa5.03□□□□□ -1.6
VCL-204ENST00000472585 BOD1L2Q8IYS8 172 aa5.03□□□□□ -1.6
VCL-204ENST00000472585 KRTAP15-1Q3LI76 137 aa5.02□□□□□ -1.61
VCL-204ENST00000472585 TMEM170BQ5T4T1 132 aa5.02□□□□□ -1.61
VCL-204ENST00000472585 FA2HQ7L5A8 372 aa5.02□□□□□ -1.61
VCL-204ENST00000472585 BAGE3Q86Y29 109 aa5.02□□□□□ -1.61
VCL-204ENST00000472585 LOC105371267A0A1B0GV96 52 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms