RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 TRAV1-1A0A0B4J248 108 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 MUC21A0A0G2JKD1 596 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 F2Z2F3 143 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 K7EN84 100 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 M0QXV9 152 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 PFDN1O60925 122 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 TRGC1P0CF51 173 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 SMIM17P0DL12 118 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 ZNF25P17030 456 aaPredicted RBP1.62□□□□□ -2.15
HDAC9-221ENST00000471887 NKX2-5P52952 324 aaPredicted RBP1.62□□□□□ -2.15
HDAC9-221ENST00000471887 COX6A2Q02221 97 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 COTL1Q14019 142 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 RASL11AQ6T310 242 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 DPH3P1Q9H4G8 78 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 NIT2Q9NQR4 276 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 MUC17Q685J3 4493 aa1.62□□□□□ -2.15
HDAC9-221ENST00000471887 IGHV1-58A0A0C4DH39 117 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 TRBV6-5A0A0K0K1A5 114 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 UBE2L6O14933 153 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 MGPP08493 103 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 ESDP10768 282 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 RPL35P42766 123 aaKnown RBP1.61□□□□□ -2.15
HDAC9-221ENST00000471887 SULT1A2P50226 295 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 CCL20P78556 96 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 CENPWQ5EE01 88 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 MRPL52Q86TS9 123 aaKnown RBP1.61□□□□□ -2.15
HDAC9-221ENST00000471887 C9orf62Q8N4C0 152 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 KCNRGQ8N5I3 272 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 OR2D3Q8NGH3 330 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 OR5A1Q8NGJ0 315 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 CARD19Q96LW7 228 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 MAP1LC3CQ9BXW4 147 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 MANBALQ9NQG1 85 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 BIN3Q9NQY0 253 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 PSORS1C2Q9UIG4 136 aa1.61□□□□□ -2.15
HDAC9-221ENST00000471887 FCGBPQ9Y6R7 5405 aaPredicted RBP1.61□□□□□ -2.15
HDAC9-221ENST00000471887 TRBV20OR9-2A0A075B6H5 130 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 MUC21A0A140T8X8 626 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 LINC00959A0A1B0GUT2 108 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 HMSDA8MTL9 139 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 CCL25O15444 150 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 ARPC5O15511 151 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 PDE6DO43924 150 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 FGF6P10767 208 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 RAB5CP51148 216 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 EIF5AP63241 154 aaKnown RBP1.6□□□□□ -2.15
HDAC9-221ENST00000471887 TEX261Q6UWH6 196 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 LYZL1Q6UWQ5 148 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 GATD1Q8NB37 220 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 FAM213BQ8TBF2 198 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 SFT2D1Q8WV19 159 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 CDC42SE2Q9NRR3 84 aa1.6□□□□□ -2.15
HDAC9-221ENST00000471887 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.59□□□□□ -2.15
HDAC9-221ENST00000471887 TRAV26-2A0A0B4J265 109 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 TRBV27A0A0K0K1C4 114 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 LOC107984640A0A0U1RRK4 108 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 IGKV2-29A2NJV5 120 aaPredicted RBP1.59□□□□□ -2.15
HDAC9-221ENST00000471887 C7orf77A4D0Y5 90 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 I3L3M4 83 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 APOMO95445 188 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 IFNA1P01562 189 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 BCL2P10415 239 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 GNG4P50150 75 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 POLR2KP53803 58 aaKnown RBP1.59□□□□□ -2.15
HDAC9-221ENST00000471887 FOXA3P55318 350 aaPredicted RBP1.59□□□□□ -2.15
HDAC9-221ENST00000471887 NUP35Q8NFH5 326 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 TSKUQ8WUA8 353 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 DIRC1Q969H9 104 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 RPL39LQ96EH5 51 aaKnown RBP1.59□□□□□ -2.15
HDAC9-221ENST00000471887 DPH3Q96FX2 82 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 MRAP2Q96G30 205 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 BTF3L4Q96K17 158 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 TIMM21Q9BVV7 248 aa1.59□□□□□ -2.15
HDAC9-221ENST00000471887 IGKV3OR2-268A0A0C4DH90 116 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 A0A1B0GV50 99 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 KANTRA0A1W2PQU2 76 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 RAB19A4D1S5 217 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 C1orf196B1AJZ1 125 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 TMEM250H0YL14 139 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 COX7A2LO14548 114 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 XCL1P47992 114 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 SMAGPQ0VAQ4 97 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 SS18Q15532 418 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 C9orf116Q5BN46 136 aaPredicted RBP1.58□□□□□ -2.16
HDAC9-221ENST00000471887 EIF5AL1Q6IS14 154 aaKnown RBP1.58□□□□□ -2.16
HDAC9-221ENST00000471887 TMEM191AQ9H0A3 160 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 BATF3Q9NR55 127 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 TMEM242Q9NWH2 141 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 MRPL35Q9NZE8 188 aaKnown RBP1.58□□□□□ -2.16
HDAC9-221ENST00000471887 GNG13Q9P2W3 67 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 UBE2D4Q9Y2X8 147 aa1.58□□□□□ -2.16
HDAC9-221ENST00000471887 SMLR1H3BR10 107 aa1.57□□□□□ -2.16
HDAC9-221ENST00000471887 SLC25A20O43772 301 aa1.57□□□□□ -2.16
HDAC9-221ENST00000471887 PPP1R17O96001 155 aa1.57□□□□□ -2.16
HDAC9-221ENST00000471887 MT-ND6P03923 174 aa1.57□□□□□ -2.16
HDAC9-221ENST00000471887 CTAG1AP78358 180 aa1.57□□□□□ -2.16
HDAC9-221ENST00000471887 MRPS36P82909 103 aaKnown RBP1.57□□□□□ -2.16
HDAC9-221ENST00000471887 SPAG11BQ08648 103 aa1.57□□□□□ -2.16
HDAC9-221ENST00000471887 RGS21Q2M5E4 152 aa1.57□□□□□ -2.16
HDAC9-221ENST00000471887 C1orf137Q5JT78 98 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms