RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 LINC00337Q8N6G1 96 aa4.36□□□□□ -1.71
SPEN-204ENST00000471538 CHCHD10Q8WYQ3 142 aaPredicted RBP4.36□□□□□ -1.71
SPEN-204ENST00000471538 C11orf68Q9H3H3 251 aaKnown RBP4.36□□□□□ -1.71
SPEN-204ENST00000471538 SND1-IT1Q9HBX3 110 aa4.36□□□□□ -1.71
SPEN-204ENST00000471538 RETNQ9HD89 108 aa4.36□□□□□ -1.71
SPEN-204ENST00000471538 PRR34Q9NV39 138 aa4.36□□□□□ -1.71
SPEN-204ENST00000471538 CSMD3Q7Z407 3707 aa4.35□□□□□ -1.71
SPEN-204ENST00000471538 ANGP03950 147 aaKnown RBP4.35□□□□□ -1.71
SPEN-204ENST00000471538 CXCL5P42830 114 aa4.35□□□□□ -1.71
SPEN-204ENST00000471538 LINC00158P58513 81 aa4.35□□□□□ -1.71
SPEN-204ENST00000471538 C6orf226Q5I0X4 101 aa4.35□□□□□ -1.71
SPEN-204ENST00000471538 LYPD5Q6UWN5 251 aa4.35□□□□□ -1.71
SPEN-204ENST00000471538 NTN5Q8WTR8 489 aaPredicted RBP4.35□□□□□ -1.71
SPEN-204ENST00000471538 CRPP02741 224 aa4.34□□□□□ -1.71
SPEN-204ENST00000471538 HTN3P15516 51 aa4.34□□□□□ -1.71
SPEN-204ENST00000471538 PFN2P35080 140 aa4.34□□□□□ -1.71
SPEN-204ENST00000471538 C21orf62-AS1Q17RA5 79 aa4.34□□□□□ -1.71
SPEN-204ENST00000471538 DEFB121Q5J5C9 76 aa4.34□□□□□ -1.71
SPEN-204ENST00000471538 ENHOQ6UWT2 76 aa4.34□□□□□ -1.71
SPEN-204ENST00000471538 C2orf82Q6UX34 121 aa4.34□□□□□ -1.71
SPEN-204ENST00000471538 FAM218AQ96MZ4 157 aa4.34□□□□□ -1.71
SPEN-204ENST00000471538 SIGMAR1Q99720 223 aa4.34□□□□□ -1.71
SPEN-204ENST00000471538 PCLOQ9Y6V0 5065 aa4.34□□□□□ -1.72
SPEN-204ENST00000471538 IGLV10-54A0A075B6I4 117 aa4.33□□□□□ -1.72
SPEN-204ENST00000471538 TEX49A0A1B0GTD5 131 aa4.33□□□□□ -1.72
SPEN-204ENST00000471538 TRACP01848 142 aa4.33□□□□□ -1.72
SPEN-204ENST00000471538 COX17Q14061 63 aa4.33□□□□□ -1.72
SPEN-204ENST00000471538 Q6ZTC4 211 aa4.33□□□□□ -1.72
SPEN-204ENST00000471538 UBE2WQ96B02 151 aa4.33□□□□□ -1.72
SPEN-204ENST00000471538 KLK5Q9Y337 293 aaPredicted RBP4.33□□□□□ -1.72
SPEN-204ENST00000471538 C22orf24Q9Y442 160 aa4.33□□□□□ -1.72
SPEN-204ENST00000471538 SCGB1A1P11684 91 aa4.32□□□□□ -1.72
SPEN-204ENST00000471538 SMIM11BQ8TCY0 68 aa4.32□□□□□ -1.72
SPEN-204ENST00000471538 TRAV8-4A0A0B4J246 113 aa4.31□□□□□ -1.72
SPEN-204ENST00000471538 NDUFC2O95298 119 aa4.31□□□□□ -1.72
SPEN-204ENST00000471538 MALP21145 153 aa4.31□□□□□ -1.72
SPEN-204ENST00000471538 XGP55808 180 aa4.31□□□□□ -1.72
SPEN-204ENST00000471538 NANOS2P60321 138 aaKnown RBP4.31□□□□□ -1.72
SPEN-204ENST00000471538 CKS1BP61024 79 aa4.31□□□□□ -1.72
SPEN-204ENST00000471538 CFAP161Q6P656 301 aa4.31□□□□□ -1.72
SPEN-204ENST00000471538 KRTAP26-1Q6PEX3 210 aa4.31□□□□□ -1.72
SPEN-204ENST00000471538 WFDC10BQ8IUB3 73 aa4.31□□□□□ -1.72
SPEN-204ENST00000471538 KLK12Q9UKR0 248 aa4.31□□□□□ -1.72
SPEN-204ENST00000471538 FRAS1Q86XX4 4008 aa4.31□□□□□ -1.72
SPEN-204ENST00000471538 DNAH10Q8IVF4 4471 aa4.31□□□□□ -1.72
SPEN-204ENST00000471538 GVQW2A0A096LPI5 108 aaPredicted RBP4.3□□□□□ -1.72
SPEN-204ENST00000471538 A0A0J9YWU9 116 aa4.3□□□□□ -1.72
SPEN-204ENST00000471538 SPAG11BQ08648 103 aa4.3□□□□□ -1.72
SPEN-204ENST00000471538 C10orf25Q5T742 122 aa4.3□□□□□ -1.72
SPEN-204ENST00000471538 Q8NDZ9 215 aa4.3□□□□□ -1.72
SPEN-204ENST00000471538 MUC7Q8TAX7 377 aa4.3□□□□□ -1.72
SPEN-204ENST00000471538 MRAPQ8TCY5 172 aa4.3□□□□□ -1.72
SPEN-204ENST00000471538 A0A087WYN8 130 aa4.29□□□□□ -1.72
SPEN-204ENST00000471538 H0YGX0 51 aa4.29□□□□□ -1.72
SPEN-204ENST00000471538 MT-ATP8P03928 68 aa4.29□□□□□ -1.72
SPEN-204ENST00000471538 KRTAP10-2P60368 255 aa4.29□□□□□ -1.72
SPEN-204ENST00000471538 ESRGQ1W209 222 aa4.29□□□□□ -1.72
SPEN-204ENST00000471538 C9orf116Q5BN46 136 aaPredicted RBP4.29□□□□□ -1.72
SPEN-204ENST00000471538 UNQ6190/PRO20217Q6UXQ8 127 aa4.29□□□□□ -1.72
SPEN-204ENST00000471538 C6orf223Q8N319 242 aa4.29□□□□□ -1.72
SPEN-204ENST00000471538 ALMS1Q8TCU4 4167 aa4.29□□□□□ -1.72
SPEN-204ENST00000471538 FAM240AA0A1B0GVK7 77 aa4.29□□□□□ -1.72
SPEN-204ENST00000471538 H3BS24 57 aa4.29□□□□□ -1.72
SPEN-204ENST00000471538 K7EIL1 84 aa4.29□□□□□ -1.72
SPEN-204ENST00000471538 LINC00167Q96N53 147 aa4.29□□□□□ -1.72
SPEN-204ENST00000471538 HECTD4Q9Y4D8 3996 aa4.28□□□□□ -1.72
SPEN-204ENST00000471538 DEFB131BA0A096LNP1 70 aa4.28□□□□□ -1.72
SPEN-204ENST00000471538 BAALC-AS2P0C853 105 aa4.28□□□□□ -1.72
SPEN-204ENST00000471538 NHLRC4P0CG21 123 aaPredicted RBP4.28□□□□□ -1.72
SPEN-204ENST00000471538 PRR3P79522 188 aaKnown RBP4.28□□□□□ -1.72
SPEN-204ENST00000471538 LINC01556Q5JQF7 62 aa4.28□□□□□ -1.72
SPEN-204ENST00000471538 C11orf45Q8TAV5 145 aa4.28□□□□□ -1.72
SPEN-204ENST00000471538 LINC00526Q96FQ7 95 aa4.28□□□□□ -1.72
SPEN-204ENST00000471538 TM2D3Q9BRN9 247 aa4.28□□□□□ -1.72
SPEN-204ENST00000471538 Q9HAA7 133 aa4.28□□□□□ -1.72
SPEN-204ENST00000471538 C6orf48Q9UBA6 75 aa4.28□□□□□ -1.72
SPEN-204ENST00000471538 C15orf56Q8N910 161 aa4.27□□□□□ -1.73
SPEN-204ENST00000471538 OR13C6PQ8NH95 151 aa4.27□□□□□ -1.73
SPEN-204ENST00000471538 OBSCN-AS1Q96MR7 158 aa4.27□□□□□ -1.73
SPEN-204ENST00000471538 B9D2Q9BPU9 175 aa4.27□□□□□ -1.73
SPEN-204ENST00000471538 A0A1B0GX51 115 aa4.26□□□□□ -1.73
SPEN-204ENST00000471538 TMEM126AQ9H061 195 aa4.26□□□□□ -1.73
SPEN-204ENST00000471538 NCR3O14931 201 aa4.25□□□□□ -1.73
SPEN-204ENST00000471538 LECT2O14960 151 aa4.25□□□□□ -1.73
SPEN-204ENST00000471538 IGLV6-57P01721 117 aa4.25□□□□□ -1.73
SPEN-204ENST00000471538 DNAH10OSP0CZ25 163 aa4.25□□□□□ -1.73
SPEN-204ENST00000471538 C9orf129Q5T035 196 aaKnown RBP4.25□□□□□ -1.73
SPEN-204ENST00000471538 SDIM1Q6ZPB5 146 aa4.25□□□□□ -1.73
SPEN-204ENST00000471538 WWC2-AS2Q96NR7 200 aa4.25□□□□□ -1.73
SPEN-204ENST00000471538 TRAV10A0A0B4J240 114 aa4.24□□□□□ -1.73
SPEN-204ENST00000471538 DNAL4O96015 105 aa4.24□□□□□ -1.73
SPEN-204ENST00000471538 ACYP1P07311 99 aa4.24□□□□□ -1.73
SPEN-204ENST00000471538 Q6Q795 121 aa4.24□□□□□ -1.73
SPEN-204ENST00000471538 C2orf48Q96LS8 159 aa4.24□□□□□ -1.73
SPEN-204ENST00000471538 KIAA1109Q2LD37 5005 aa4.24□□□□□ -1.73
SPEN-204ENST00000471538 F8WDY8 70 aa4.23□□□□□ -1.73
SPEN-204ENST00000471538 INAFM2P0DMQ5 153 aa4.23□□□□□ -1.73
SPEN-204ENST00000471538 HIGD2BQ4VC39 106 aa4.23□□□□□ -1.73
SPEN-204ENST00000471538 Q6ZRU5 148 aa4.23□□□□□ -1.73
SPEN-204ENST00000471538 Q8N814 137 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms