RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 C15orf56Q8N910 161 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 C9orf163Q8N9P6 203 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 CARD19Q96LW7 228 aa3.69□□□□□ -1.82
VARS-222ENST00000470953 GVQW2A0A096LPI5 108 aaPredicted RBP3.68□□□□□ -1.82
VARS-222ENST00000470953 CCDC179H3BU77 68 aa3.68□□□□□ -1.82
VARS-222ENST00000470953 SYS1-DBNDD2H3BUS1 97 aa3.68□□□□□ -1.82
VARS-222ENST00000470953 NUPR1O60356 82 aa3.68□□□□□ -1.82
VARS-222ENST00000470953 RPL39P62891 51 aaKnown RBP3.68□□□□□ -1.82
VARS-222ENST00000470953 GAGE2BQ13066 116 aa3.68□□□□□ -1.82
VARS-222ENST00000470953 KIAA1644Q3SXP7 199 aa3.68□□□□□ -1.82
VARS-222ENST00000470953 GAGE2EQ4V326 116 aa3.68□□□□□ -1.82
VARS-222ENST00000470953 KRTAP26-1Q6PEX3 210 aa3.68□□□□□ -1.82
VARS-222ENST00000470953 C7orf33Q8WU49 177 aa3.68□□□□□ -1.82
VARS-222ENST00000470953 CDC42SE2Q9NRR3 84 aa3.68□□□□□ -1.82
VARS-222ENST00000470953 GAGE2DQ9UEU5 116 aa3.68□□□□□ -1.82
VARS-222ENST00000470953 UBE2D4Q9Y2X8 147 aa3.68□□□□□ -1.82
VARS-222ENST00000470953 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.68□□□□□ -1.82
VARS-222ENST00000470953 H3BUT2 72 aa3.67□□□□□ -1.82
VARS-222ENST00000470953 MT-ATP8P03928 68 aa3.67□□□□□ -1.82
VARS-222ENST00000470953 CHTF8P0CG12 524 aa3.67□□□□□ -1.82
VARS-222ENST00000470953 COX8AP10176 69 aa3.67□□□□□ -1.82
VARS-222ENST00000470953 COX6A2Q02221 97 aa3.67□□□□□ -1.82
VARS-222ENST00000470953 SPAG11BQ08648 103 aa3.67□□□□□ -1.82
VARS-222ENST00000470953 ORMDL2Q53FV1 153 aa3.67□□□□□ -1.82
VARS-222ENST00000470953 PPDPFLQ8WWR9 84 aa3.67□□□□□ -1.82
VARS-222ENST00000470953 CAMK2N2Q96S95 79 aa3.67□□□□□ -1.82
VARS-222ENST00000470953 TIMM21Q9BVV7 248 aa3.67□□□□□ -1.82
VARS-222ENST00000470953 GNB1LQ9BYB4 327 aa3.67□□□□□ -1.82
VARS-222ENST00000470953 RPL18AQ02543 176 aaKnown RBP3.66□□□□□ -1.82
VARS-222ENST00000470953 SYCNQ0VAF6 134 aa3.66□□□□□ -1.82
VARS-222ENST00000470953 C5orf38Q86SI9 138 aa3.66□□□□□ -1.82
VARS-222ENST00000470953 ATOH7Q8N100 152 aa3.66□□□□□ -1.82
VARS-222ENST00000470953 RAB37Q96AX2 223 aa3.66□□□□□ -1.82
VARS-222ENST00000470953 PLEKHB2Q96CS7 222 aa3.66□□□□□ -1.82
VARS-222ENST00000470953 LINC00526Q96FQ7 95 aa3.66□□□□□ -1.82
VARS-222ENST00000470953 TMEM141Q96I45 108 aa3.66□□□□□ -1.82
VARS-222ENST00000470953 NXT2Q9NPJ8 142 aaKnown RBP3.66□□□□□ -1.82
VARS-222ENST00000470953 LINC00474Q9P2X8 69 aa3.66□□□□□ -1.82
VARS-222ENST00000470953 IGLV4-69A0A075B6H9 119 aa3.65□□□□□ -1.83
VARS-222ENST00000470953 SNCGO76070 127 aa3.65□□□□□ -1.83
VARS-222ENST00000470953 SMIM13P0DJ93 91 aa3.65□□□□□ -1.83
VARS-222ENST00000470953 MRPS36P82909 103 aaKnown RBP3.65□□□□□ -1.83
VARS-222ENST00000470953 PAPPA-AS1Q5QFB9 102 aa3.65□□□□□ -1.83
VARS-222ENST00000470953 C2orf66Q6UXQ4 117 aa3.65□□□□□ -1.83
VARS-222ENST00000470953 SDIM1Q6ZPB5 146 aa3.65□□□□□ -1.83
VARS-222ENST00000470953 Q8N8P6 123 aa3.65□□□□□ -1.83
VARS-222ENST00000470953 PRSS3P2Q8NHM4 247 aa3.65□□□□□ -1.83
VARS-222ENST00000470953 SPACA4Q8TDM5 124 aa3.65□□□□□ -1.83
VARS-222ENST00000470953 MRPL18Q9H0U6 180 aaKnown RBP3.65□□□□□ -1.83
VARS-222ENST00000470953 A0A087WYN8 130 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 A0A096LNI7 61 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 LOC107984640A0A0U1RRK4 108 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 E9PLD3 99 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 K7EMI3 77 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 UQCRQO14949 82 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 NDUFA1O15239 70 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 ATP5LO75964 103 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 PRSS2P07478 247 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 TMEM258P61165 79 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 LYRM7Q5U5X0 104 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 C2orf91Q6ZV80 131 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 OPRPNQ99935 248 aaPredicted RBP3.64□□□□□ -1.83
VARS-222ENST00000470953 IMUPQ9GZP8 106 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 HIGD1BQ9P298 99 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 PRO0461Q9UI25 63 aa3.64□□□□□ -1.83
VARS-222ENST00000470953 IGLV4-3A0A075B6K6 122 aa3.63□□□□□ -1.83
VARS-222ENST00000470953 SLPIP03973 132 aa3.63□□□□□ -1.83
VARS-222ENST00000470953 NMUP48645 174 aa3.63□□□□□ -1.83
VARS-222ENST00000470953 PRR4Q16378 134 aa3.63□□□□□ -1.83
VARS-222ENST00000470953 TAL2Q16559 108 aa3.63□□□□□ -1.83
VARS-222ENST00000470953 ETDBQ3ZM63 59 aa3.63□□□□□ -1.83
VARS-222ENST00000470953 C1orf195Q5TG92 126 aa3.63□□□□□ -1.83
VARS-222ENST00000470953 C2orf48Q96LS8 159 aa3.63□□□□□ -1.83
VARS-222ENST00000470953 PYGO1Q9Y3Y4 419 aa3.63□□□□□ -1.83
VARS-222ENST00000470953 DPM2O94777 84 aa3.62□□□□□ -1.83
VARS-222ENST00000470953 CRYGAP11844 174 aa3.62□□□□□ -1.83
VARS-222ENST00000470953 CD164Q04900 197 aa3.62□□□□□ -1.83
VARS-222ENST00000470953 CIRBPQ14011 172 aaKnown RBP3.62□□□□□ -1.83
VARS-222ENST00000470953 TEN1Q86WV5 123 aa3.62□□□□□ -1.83
VARS-222ENST00000470953 C3orf22Q8N5N4 141 aa3.62□□□□□ -1.83
VARS-222ENST00000470953 SCGB3A1Q96QR1 104 aa3.62□□□□□ -1.83
VARS-222ENST00000470953 TOMM7Q9P0U1 55 aa3.62□□□□□ -1.83
VARS-222ENST00000470953 IGHV3OR16-9A0A0B4J2B5 98 aa3.61□□□□□ -1.83
VARS-222ENST00000470953 TRBV7-7A0A0K0K1E9 115 aa3.61□□□□□ -1.83
VARS-222ENST00000470953 A0A1B0GWB2 263 aa3.61□□□□□ -1.83
VARS-222ENST00000470953 LINC01549A6NIU2 74 aa3.61□□□□□ -1.83
VARS-222ENST00000470953 LORP23490 312 aaPredicted RBP3.61□□□□□ -1.83
VARS-222ENST00000470953 UBE2D1P51668 147 aa3.61□□□□□ -1.83
VARS-222ENST00000470953 HERVK_113P63121 156 aa3.61□□□□□ -1.83
VARS-222ENST00000470953 C4orf26Q17RF5 130 aa3.61□□□□□ -1.83
VARS-222ENST00000470953 KRTAP6-3Q3LI67 103 aa3.61□□□□□ -1.83
VARS-222ENST00000470953 C4orf48Q5BLP8 95 aa3.61□□□□□ -1.83
VARS-222ENST00000470953 C9orf153Q5TBE3 101 aa3.61□□□□□ -1.83
VARS-222ENST00000470953 CHCHD1Q96BP2 118 aaKnown RBP3.61□□□□□ -1.83
VARS-222ENST00000470953 TIMM17AQ99595 171 aa3.61□□□□□ -1.83
VARS-222ENST00000470953 NAA38Q9BRA0 125 aaKnown RBP3.61□□□□□ -1.83
VARS-222ENST00000470953 PLAC8Q9NZF1 115 aa3.61□□□□□ -1.83
VARS-222ENST00000470953 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
VARS-222ENST00000470953 A0A087WZ39 114 aa3.6□□□□□ -1.83
VARS-222ENST00000470953 NDUFC2-KCTD14E9PQ53 114 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms