RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 IGIPA6NJ69 53 aa5.08□□□□□ -1.6
CCDC171-204ENST00000470191 RAB14P61106 215 aa5.08□□□□□ -1.6
CCDC171-204ENST00000470191 SPRR4Q96PI1 79 aa5.08□□□□□ -1.6
CCDC171-204ENST00000470191 A0A1B0GVG6 124 aa5.07□□□□□ -1.6
CCDC171-204ENST00000470191 VPREB1P12018 145 aa5.07□□□□□ -1.6
CCDC171-204ENST00000470191 ORMDL2Q53FV1 153 aa5.07□□□□□ -1.6
CCDC171-204ENST00000470191 PDZD11Q5EBL8 140 aa5.07□□□□□ -1.6
CCDC171-204ENST00000470191 NDUFA12Q9UI09 145 aa5.07□□□□□ -1.6
CCDC171-204ENST00000470191 PRSS47A8MTI9 375 aa5.06□□□□□ -1.6
CCDC171-204ENST00000470191 C9JQL5 133 aa5.06□□□□□ -1.6
CCDC171-204ENST00000470191 CFC1BP0CG36 223 aa5.06□□□□□ -1.6
CCDC171-204ENST00000470191 PAPPA-AS1Q5QFB9 102 aa5.06□□□□□ -1.6
CCDC171-204ENST00000470191 TCTE3Q8IZS6 198 aa5.06□□□□□ -1.6
CCDC171-204ENST00000470191 GNB1LQ9BYB4 327 aa5.06□□□□□ -1.6
CCDC171-204ENST00000470191 SND1-IT1Q9HBX3 110 aa5.06□□□□□ -1.6
CCDC171-204ENST00000470191 ATP5LO75964 103 aa5.05□□□□□ -1.6
CCDC171-204ENST00000470191 SPINK1P00995 79 aa5.05□□□□□ -1.6
CCDC171-204ENST00000470191 KRTAP19-2Q3LHN2 52 aa5.05□□□□□ -1.6
CCDC171-204ENST00000470191 Q8NDZ9 215 aa5.05□□□□□ -1.6
CCDC171-204ENST00000470191 ZNF625Q96I27 306 aaPredicted RBP5.05□□□□□ -1.6
CCDC171-204ENST00000470191 IGLV9-49A0A0B4J1Y8 123 aa5.04□□□□□ -1.6
CCDC171-204ENST00000470191 TINCRA0A1B0GVN0 87 aa5.04□□□□□ -1.6
CCDC171-204ENST00000470191 M0R2T5 61 aa5.04□□□□□ -1.6
CCDC171-204ENST00000470191 NPSP0C0P6 89 aa5.04□□□□□ -1.6
CCDC171-204ENST00000470191 KRTAP10-6P60371 365 aaPredicted RBP5.04□□□□□ -1.6
CCDC171-204ENST00000470191 RPL24P83731 157 aaKnown RBP5.04□□□□□ -1.6
CCDC171-204ENST00000470191 SCGB3A1Q96QR1 104 aa5.04□□□□□ -1.6
CCDC171-204ENST00000470191 LAMTOR2Q9Y2Q5 125 aa5.04□□□□□ -1.6
CCDC171-204ENST00000470191 ZNF706Q9Y5V0 76 aaPredicted RBP5.04□□□□□ -1.6
CCDC171-204ENST00000470191 IGLV8-61A0A075B6I0 122 aa5.03□□□□□ -1.6
CCDC171-204ENST00000470191 ADCYAP1P18509 176 aa5.03□□□□□ -1.6
CCDC171-204ENST00000470191 MOBPQ13875 183 aa5.03□□□□□ -1.6
CCDC171-204ENST00000470191 PCOTHQ58A44 107 aa5.03□□□□□ -1.6
CCDC171-204ENST00000470191 ATP5L2Q7Z4Y8 100 aa5.03□□□□□ -1.6
CCDC171-204ENST00000470191 AKAP14Q86UN6 197 aa5.03□□□□□ -1.6
CCDC171-204ENST00000470191 Q8N377 158 aa5.03□□□□□ -1.6
CCDC171-204ENST00000470191 TOMM6Q96B49 74 aa5.03□□□□□ -1.6
CCDC171-204ENST00000470191 TIMM17AQ99595 171 aa5.03□□□□□ -1.6
CCDC171-204ENST00000470191 SMCR5Q8TEV8 140 aa5.02□□□□□ -1.61
CCDC171-204ENST00000470191 NXT2Q9NPJ8 142 aaKnown RBP5.02□□□□□ -1.61
CCDC171-204ENST00000470191 ERG28Q9UKR5 140 aa5.02□□□□□ -1.61
CCDC171-204ENST00000470191 IGLV5-45A0A087WSX0 123 aa5.01□□□□□ -1.61
CCDC171-204ENST00000470191 GAGE2AQ6NT46 116 aa5.01□□□□□ -1.61
CCDC171-204ENST00000470191 ERASQ7Z444 233 aa5.01□□□□□ -1.61
CCDC171-204ENST00000470191 FAM19A2Q8N3H0 131 aa5.01□□□□□ -1.61
CCDC171-204ENST00000470191 A0A0U1RRA0 63 aa5□□□□□ -1.61
CCDC171-204ENST00000470191 C9orf118A6NHY6 69 aa5□□□□□ -1.61
CCDC171-204ENST00000470191 K7EMI3 77 aa5□□□□□ -1.61
CCDC171-204ENST00000470191 SLC25A20O43772 301 aa5□□□□□ -1.61
CCDC171-204ENST00000470191 G0S2P27469 103 aa5□□□□□ -1.61
CCDC171-204ENST00000470191 CST9LQ9H4G1 147 aa5□□□□□ -1.61
CCDC171-204ENST00000470191 C9orf92A6NGG3 77 aa4.99□□□□□ -1.61
CCDC171-204ENST00000470191 H3BRM9 83 aa4.99□□□□□ -1.61
CCDC171-204ENST00000470191 PEA15Q15121 130 aa4.99□□□□□ -1.61
CCDC171-204ENST00000470191 KIAA1644Q3SXP7 199 aa4.99□□□□□ -1.61
CCDC171-204ENST00000470191 ETDCA0A1B0GVM5 59 aa4.98□□□□□ -1.61
CCDC171-204ENST00000470191 NCR3O14931 201 aa4.98□□□□□ -1.61
CCDC171-204ENST00000470191 NDUFA6P56556 154 aa4.98□□□□□ -1.61
CCDC171-204ENST00000470191 LINC00158P58513 81 aa4.98□□□□□ -1.61
CCDC171-204ENST00000470191 PMVKQ15126 192 aa4.97□□□□□ -1.61
CCDC171-204ENST00000470191 PRYO14603 147 aa4.96□□□□□ -1.62
CCDC171-204ENST00000470191 COX17Q14061 63 aa4.96□□□□□ -1.62
CCDC171-204ENST00000470191 C9orf153Q5TBE3 101 aa4.96□□□□□ -1.62
CCDC171-204ENST00000470191 COX6B2Q6YFQ2 88 aa4.96□□□□□ -1.62
CCDC171-204ENST00000470191 IGLV5-39A0A0G2JS06 123 aa4.95□□□□□ -1.62
CCDC171-204ENST00000470191 ERC2-IT1O76042 136 aa4.95□□□□□ -1.62
CCDC171-204ENST00000470191 RPS29P62273 56 aaKnown RBP4.95□□□□□ -1.62
CCDC171-204ENST00000470191 LINC00483Q53H64 154 aa4.95□□□□□ -1.62
CCDC171-204ENST00000470191 SSBP3-AS1Q7Z2R9 100 aa4.95□□□□□ -1.62
CCDC171-204ENST00000470191 ZNF22P17026 224 aaPredicted RBP4.94□□□□□ -1.62
CCDC171-204ENST00000470191 BOD1L2Q8IYS8 172 aa4.94□□□□□ -1.62
CCDC171-204ENST00000470191 ATP6V1G1O75348 118 aa4.93□□□□□ -1.62
CCDC171-204ENST00000470191 IGLC3P0DOY3 106 aa4.93□□□□□ -1.62
CCDC171-204ENST00000470191 HRCT1Q6UXD1 115 aa4.93□□□□□ -1.62
CCDC171-204ENST00000470191 SVIPQ8NHG7 77 aa4.93□□□□□ -1.62
CCDC171-204ENST00000470191 TRBV10-3A0A0K0K1G6 114 aa4.92□□□□□ -1.62
CCDC171-204ENST00000470191 KRTAP4-16G5E9R7 235 aaPredicted RBP4.92□□□□□ -1.62
CCDC171-204ENST00000470191 MT-ND4LP03901 98 aa4.92□□□□□ -1.62
CCDC171-204ENST00000470191 SPRR1AP35321 89 aa4.92□□□□□ -1.62
CCDC171-204ENST00000470191 TMEM170BQ5T4T1 132 aa4.92□□□□□ -1.62
CCDC171-204ENST00000470191 KCNQ1DNQ9H478 68 aa4.92□□□□□ -1.62
CCDC171-204ENST00000470191 B5MCH6 92 aa4.91□□□□□ -1.62
CCDC171-204ENST00000470191 SMIM13P0DJ93 91 aa4.91□□□□□ -1.62
CCDC171-204ENST00000470191 FA2HQ7L5A8 372 aa4.91□□□□□ -1.62
CCDC171-204ENST00000470191 SMCO4Q9NRQ5 59 aa4.91□□□□□ -1.62
CCDC171-204ENST00000470191 LINC01549A6NIU2 74 aa4.9□□□□□ -1.63
CCDC171-204ENST00000470191 C11orf86A6NJI1 115 aa4.9□□□□□ -1.63
CCDC171-204ENST00000470191 Q9BRP9 147 aa4.9□□□□□ -1.63
CCDC171-204ENST00000470191 IGLV6-57P01721 117 aa4.89□□□□□ -1.63
CCDC171-204ENST00000470191 S100A12P80511 92 aa4.89□□□□□ -1.63
CCDC171-204ENST00000470191 MEIG1Q5JSS6 88 aa4.89□□□□□ -1.63
CCDC171-204ENST00000470191 MIR7-3HGQ8N6C7 128 aa4.89□□□□□ -1.63
CCDC171-204ENST00000470191 TRAV9-1A0A075B6T8 112 aa4.88□□□□□ -1.63
CCDC171-204ENST00000470191 LINC01546A6NGU7 62 aa4.87□□□□□ -1.63
CCDC171-204ENST00000470191 PMCHL1Q16048 86 aa4.87□□□□□ -1.63
CCDC171-204ENST00000470191 Q6Q795 121 aa4.87□□□□□ -1.63
CCDC171-204ENST00000470191 SFTA2Q6UW10 78 aa4.87□□□□□ -1.63
CCDC171-204ENST00000470191 BAGE3Q86Y29 109 aa4.87□□□□□ -1.63
CCDC171-204ENST00000470191 ST20-AS1Q8NBB2 130 aa4.87□□□□□ -1.63
CCDC171-204ENST00000470191 FLGP20930 4061 aaPredicted RBP4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms