RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 SND1-IT1Q9HBX3 110 aa6.42□□□□□ -1.38
LSM2-209ENST00000470083 IGLV9-49A0A0B4J1Y8 123 aa6.41□□□□□ -1.38
LSM2-209ENST00000470083 ATP5LO75964 103 aa6.41□□□□□ -1.38
LSM2-209ENST00000470083 PFN2P35080 140 aa6.41□□□□□ -1.38
LSM2-209ENST00000470083 TMEM136Q6ZRR5 245 aa6.41□□□□□ -1.38
LSM2-209ENST00000470083 AKAP14Q86UN6 197 aa6.41□□□□□ -1.38
LSM2-209ENST00000470083 Q8NDZ9 215 aa6.41□□□□□ -1.38
LSM2-209ENST00000470083 PRELID3AQ96N28 172 aa6.41□□□□□ -1.38
LSM2-209ENST00000470083 LOC389332A0A1B0GUA5 103 aa6.4□□□□□ -1.38
LSM2-209ENST00000470083 C9orf92A6NGG3 77 aa6.4□□□□□ -1.38
LSM2-209ENST00000470083 RAB14P61106 215 aa6.4□□□□□ -1.38
LSM2-209ENST00000470083 SMCR5Q8TEV8 140 aa6.4□□□□□ -1.38
LSM2-209ENST00000470083 IGLV5-45A0A087WSX0 123 aa6.39□□□□□ -1.39
LSM2-209ENST00000470083 A0A1B0GXF2 115 aa6.39□□□□□ -1.39
LSM2-209ENST00000470083 GAGE2AQ6NT46 116 aa6.39□□□□□ -1.39
LSM2-209ENST00000470083 MRPL54Q6P161 138 aaKnown RBP6.39□□□□□ -1.39
LSM2-209ENST00000470083 ORMDL2Q53FV1 153 aa6.38□□□□□ -1.39
LSM2-209ENST00000470083 MAP1LC3AQ9H492 121 aa6.38□□□□□ -1.39
LSM2-209ENST00000470083 LAMTOR2Q9Y2Q5 125 aa6.38□□□□□ -1.39
LSM2-209ENST00000470083 TINCRA0A1B0GVN0 87 aa6.37□□□□□ -1.39
LSM2-209ENST00000470083 SPINK8P0C7L1 97 aa6.37□□□□□ -1.39
LSM2-209ENST00000470083 Q8N8P6 123 aa6.37□□□□□ -1.39
LSM2-209ENST00000470083 TIMM17AQ99595 171 aa6.37□□□□□ -1.39
LSM2-209ENST00000470083 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
LSM2-209ENST00000470083 SLC51BQ86UW2 128 aa6.36□□□□□ -1.39
LSM2-209ENST00000470083 BATF3Q9NR55 127 aa6.36□□□□□ -1.39
LSM2-209ENST00000470083 ERG28Q9UKR5 140 aa6.36□□□□□ -1.39
LSM2-209ENST00000470083 K7EMI3 77 aa6.35□□□□□ -1.39
LSM2-209ENST00000470083 PRYO14603 147 aa6.35□□□□□ -1.39
LSM2-209ENST00000470083 SPRR1AP35321 89 aa6.35□□□□□ -1.39
LSM2-209ENST00000470083 COX17Q14061 63 aa6.35□□□□□ -1.39
LSM2-209ENST00000470083 RPL23P62829 140 aaKnown RBP6.34□□□□□ -1.39
LSM2-209ENST00000470083 LCE3BQ5TA77 95 aa6.34□□□□□ -1.39
LSM2-209ENST00000470083 ETDCA0A1B0GVM5 59 aa6.33□□□□□ -1.4
LSM2-209ENST00000470083 IGLV6-57P01721 117 aa6.33□□□□□ -1.4
LSM2-209ENST00000470083 BLOC1S1P78537 153 aa6.33□□□□□ -1.4
LSM2-209ENST00000470083 SRP19P09132 144 aaKnown RBP6.32□□□□□ -1.4
LSM2-209ENST00000470083 G0S2P27469 103 aa6.32□□□□□ -1.4
LSM2-209ENST00000470083 ADIRFQ15847 76 aa6.32□□□□□ -1.4
LSM2-209ENST00000470083 TOMM6Q96B49 74 aa6.32□□□□□ -1.4
LSM2-209ENST00000470083 KCNQ1DNQ9H478 68 aa6.32□□□□□ -1.4
LSM2-209ENST00000470083 RPL37P61927 97 aaKnown RBP6.31□□□□□ -1.4
LSM2-209ENST00000470083 RGS21Q2M5E4 152 aa6.31□□□□□ -1.4
LSM2-209ENST00000470083 ATP5L2Q7Z4Y8 100 aa6.31□□□□□ -1.4
LSM2-209ENST00000470083 IGLV5-39A0A0G2JS06 123 aa6.3□□□□□ -1.4
LSM2-209ENST00000470083 H3BRM9 83 aa6.3□□□□□ -1.4
LSM2-209ENST00000470083 ERC2-IT1O76042 136 aa6.3□□□□□ -1.4
LSM2-209ENST00000470083 C9orf153Q5TBE3 101 aa6.3□□□□□ -1.4
LSM2-209ENST00000470083 ERASQ7Z444 233 aa6.3□□□□□ -1.4
LSM2-209ENST00000470083 LIMD2Q9BT23 127 aa6.3□□□□□ -1.4
LSM2-209ENST00000470083 NXT2Q9NPJ8 142 aaKnown RBP6.29□□□□□ -1.4
LSM2-209ENST00000470083 ZNF625Q96I27 306 aaPredicted RBP6.28□□□□□ -1.4
LSM2-209ENST00000470083 SCGB3A1Q96QR1 104 aa6.28□□□□□ -1.4
LSM2-209ENST00000470083 CST9LQ9H4G1 147 aa6.28□□□□□ -1.4
LSM2-209ENST00000470083 NAT8Q9UHE5 227 aa6.28□□□□□ -1.4
LSM2-209ENST00000470083 ADCYAP1P18509 176 aa6.27□□□□□ -1.41
LSM2-209ENST00000470083 Q6Q795 121 aa6.27□□□□□ -1.41
LSM2-209ENST00000470083 B5MCH6 92 aa6.26□□□□□ -1.41
LSM2-209ENST00000470083 SFTA2Q6UW10 78 aa6.26□□□□□ -1.41
LSM2-209ENST00000470083 ALKAL2Q6UX46 152 aa6.26□□□□□ -1.41
LSM2-209ENST00000470083 TRAV9-1A0A075B6T8 112 aa6.25□□□□□ -1.41
LSM2-209ENST00000470083 H3BS24 57 aa6.25□□□□□ -1.41
LSM2-209ENST00000470083 KRTAP6-3Q3LI67 103 aa6.25□□□□□ -1.41
LSM2-209ENST00000470083 Q9BRP9 147 aa6.25□□□□□ -1.41
LSM2-209ENST00000470083 NCR3O14931 201 aa6.24□□□□□ -1.41
LSM2-209ENST00000470083 PMVKQ15126 192 aa6.24□□□□□ -1.41
LSM2-209ENST00000470083 TRBV10-3A0A0K0K1G6 114 aa6.23□□□□□ -1.41
LSM2-209ENST00000470083 LINC00158P58513 81 aa6.23□□□□□ -1.41
LSM2-209ENST00000470083 BOD1L2Q8IYS8 172 aa6.23□□□□□ -1.41
LSM2-209ENST00000470083 LINC00846Q9NV44 126 aa6.23□□□□□ -1.41
LSM2-209ENST00000470083 NEBP20929 6669 aa6.23□□□□□ -1.41
LSM2-209ENST00000470083 LINC01549A6NIU2 74 aa6.22□□□□□ -1.41
LSM2-209ENST00000470083 MT2AP02795 61 aa6.22□□□□□ -1.41
LSM2-209ENST00000470083 IGLC3P0DOY3 106 aa6.22□□□□□ -1.41
LSM2-209ENST00000470083 S100A12P80511 92 aa6.22□□□□□ -1.41
LSM2-209ENST00000470083 HRCT1Q6UXD1 115 aa6.22□□□□□ -1.41
LSM2-209ENST00000470083 Q6ZRX8 168 aa6.22□□□□□ -1.41
LSM2-209ENST00000470083 KRTAP9-9Q9BYP9 154 aa6.21□□□□□ -1.42
LSM2-209ENST00000470083 KRTAP9-4Q9BYQ2 154 aa6.21□□□□□ -1.42
LSM2-209ENST00000470083 C9JQL5 133 aa6.2□□□□□ -1.42
LSM2-209ENST00000470083 ZNF22P17026 224 aaPredicted RBP6.2□□□□□ -1.42
LSM2-209ENST00000470083 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
LSM2-209ENST00000470083 A0A0U1RRA0 63 aa6.19□□□□□ -1.42
LSM2-209ENST00000470083 KIAA1644Q3SXP7 199 aa6.19□□□□□ -1.42
LSM2-209ENST00000470083 TCTE3Q8IZS6 198 aa6.19□□□□□ -1.42
LSM2-209ENST00000470083 MT1FP04733 61 aa6.17□□□□□ -1.42
LSM2-209ENST00000470083 KRTAP19-6Q3LI70 58 aa6.17□□□□□ -1.42
LSM2-209ENST00000470083 ATP6V1G1O75348 118 aa6.16□□□□□ -1.42
LSM2-209ENST00000470083 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
LSM2-209ENST00000470083 ST20-AS1Q8NBB2 130 aa6.16□□□□□ -1.42
LSM2-209ENST00000470083 LINC01546A6NGU7 62 aa6.15□□□□□ -1.42
LSM2-209ENST00000470083 SMIM13P0DJ93 91 aa6.15□□□□□ -1.42
LSM2-209ENST00000470083 CD164Q04900 197 aa6.15□□□□□ -1.42
LSM2-209ENST00000470083 JOSD1Q15040 202 aaPredicted RBP6.15□□□□□ -1.42
LSM2-209ENST00000470083 C1orf195Q5TG92 126 aa6.15□□□□□ -1.42
LSM2-209ENST00000470083 Q5XG85 94 aa6.15□□□□□ -1.42
LSM2-209ENST00000470083 C5orf52A6NGY3 159 aa6.14□□□□□ -1.43
LSM2-209ENST00000470083 DDTP30046 118 aa6.14□□□□□ -1.43
LSM2-209ENST00000470083 FA2HQ7L5A8 372 aa6.14□□□□□ -1.43
LSM2-209ENST00000470083 MIR7-3HGQ8N6C7 128 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms