RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 CDKN2A-AS1Q9UH64 79 aa3.95□□□□□ -1.78
PTCD3-208ENST00000469585 DYNC2H1Q8NCM8 4307 aaKnown RBP3.95□□□□□ -1.78
PTCD3-208ENST00000469585 COLCA2A8K830 154 aa3.94□□□□□ -1.78
PTCD3-208ENST00000469585 NDUFC2-KCTD14E9PQ53 114 aa3.94□□□□□ -1.78
PTCD3-208ENST00000469585 SPINK8P0C7L1 97 aa3.94□□□□□ -1.78
PTCD3-208ENST00000469585 IGLC3P0DOY3 106 aa3.94□□□□□ -1.78
PTCD3-208ENST00000469585 FABP4P15090 132 aa3.94□□□□□ -1.78
PTCD3-208ENST00000469585 S100A2P29034 98 aa3.94□□□□□ -1.78
PTCD3-208ENST00000469585 UBE2BP63146 152 aa3.94□□□□□ -1.78
PTCD3-208ENST00000469585 CXCL6P80162 114 aa3.94□□□□□ -1.78
PTCD3-208ENST00000469585 S100A12P80511 92 aa3.94□□□□□ -1.78
PTCD3-208ENST00000469585 LINC00173Q6ZV60 143 aa3.94□□□□□ -1.78
PTCD3-208ENST00000469585 CIRBP-AS1Q8TBR5 109 aa3.94□□□□□ -1.78
PTCD3-208ENST00000469585 SPACA4Q8TDM5 124 aa3.94□□□□□ -1.78
PTCD3-208ENST00000469585 PLECQ15149 4684 aaKnown RBP3.93□□□□□ -1.78
PTCD3-208ENST00000469585 FAM168BA1KXE4 195 aa3.93□□□□□ -1.78
PTCD3-208ENST00000469585 INAFM2P0DMQ5 153 aa3.93□□□□□ -1.78
PTCD3-208ENST00000469585 HAMPP81172 84 aa3.93□□□□□ -1.78
PTCD3-208ENST00000469585 UNQ6190/PRO20217Q6UXQ8 127 aa3.93□□□□□ -1.78
PTCD3-208ENST00000469585 FAM19A2Q8N3H0 131 aa3.93□□□□□ -1.78
PTCD3-208ENST00000469585 NKAPP1Q8N9T2 125 aa3.93□□□□□ -1.78
PTCD3-208ENST00000469585 YPEL4Q96NS1 127 aa3.93□□□□□ -1.78
PTCD3-208ENST00000469585 A0A096LNI7 61 aa3.92□□□□□ -1.78
PTCD3-208ENST00000469585 MYMXA0A1B0GTQ4 84 aa3.92□□□□□ -1.78
PTCD3-208ENST00000469585 SCO1O75880 301 aa3.92□□□□□ -1.78
PTCD3-208ENST00000469585 DPM2O94777 84 aa3.92□□□□□ -1.78
PTCD3-208ENST00000469585 TLX1NBP0CAT3 122 aa3.92□□□□□ -1.78
PTCD3-208ENST00000469585 LGALS3P17931 250 aaKnown RBP3.92□□□□□ -1.78
PTCD3-208ENST00000469585 CIRBPQ14011 172 aaKnown RBP3.92□□□□□ -1.78
PTCD3-208ENST00000469585 COX17Q14061 63 aa3.92□□□□□ -1.78
PTCD3-208ENST00000469585 MEIG1Q5JSS6 88 aa3.92□□□□□ -1.78
PTCD3-208ENST00000469585 C2orf82Q6UX34 121 aa3.92□□□□□ -1.78
PTCD3-208ENST00000469585 PLEKHB2Q96CS7 222 aa3.92□□□□□ -1.78
PTCD3-208ENST00000469585 MIEN1Q9BRT3 115 aa3.92□□□□□ -1.78
PTCD3-208ENST00000469585 PLAC8Q9NZF1 115 aa3.92□□□□□ -1.78
PTCD3-208ENST00000469585 C11orf86A6NJI1 115 aa3.91□□□□□ -1.78
PTCD3-208ENST00000469585 IGKCP01834 107 aa3.91□□□□□ -1.78
PTCD3-208ENST00000469585 CHTF8P0CG12 524 aa3.91□□□□□ -1.78
PTCD3-208ENST00000469585 ZNF22P17026 224 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-208ENST00000469585 LINC00158P58513 81 aa3.91□□□□□ -1.78
PTCD3-208ENST00000469585 FAM19A5Q7Z5A7 132 aaPredicted RBP3.91□□□□□ -1.78
PTCD3-208ENST00000469585 DNAH1Q9P2D7 4330 aa3.9□□□□□ -1.78
PTCD3-208ENST00000469585 HSBP1L1C9JCN9 74 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 M0QXV9 152 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 HIST1H2BKO60814 126 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 HIST1H2BJP06899 126 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 HIST1H2BOP23527 126 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 HIST1H2BBP33778 126 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 PFN2P35080 140 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 NMUP48645 174 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 HIST1H2BDP58876 126 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 HIST1H2BCP62807 126 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 HIST2H2BEQ16778 126 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 C9orf116Q5BN46 136 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-208ENST00000469585 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.9□□□□□ -1.79
PTCD3-208ENST00000469585 COPS9Q8WXC6 57 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 HIST1H2BHQ93079 126 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 FAM104AQ969W3 186 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 HIST1H2BNQ99877 126 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 HIST1H2BMQ99879 126 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 C6orf48Q9UBA6 75 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 RYR2Q92736 4967 aa3.9□□□□□ -1.79
PTCD3-208ENST00000469585 A0A096LNJ9 63 aa3.89□□□□□ -1.79
PTCD3-208ENST00000469585 KRTAP1-4P0C5Y4 121 aa3.89□□□□□ -1.79
PTCD3-208ENST00000469585 KRTDAPP60985 99 aa3.89□□□□□ -1.79
PTCD3-208ENST00000469585 KIAA0087Q14695 138 aa3.89□□□□□ -1.79
PTCD3-208ENST00000469585 ERG28Q9UKR5 140 aa3.89□□□□□ -1.79
PTCD3-208ENST00000469585 CBY1Q9Y3M2 126 aa3.89□□□□□ -1.79
PTCD3-208ENST00000469585 DNAH6Q9C0G6 4158 aa3.89□□□□□ -1.79
PTCD3-208ENST00000469585 VPS13DQ5THJ4 4388 aa3.88□□□□□ -1.79
PTCD3-208ENST00000469585 SACSQ9NZJ4 4579 aa3.88□□□□□ -1.79
PTCD3-208ENST00000469585 TMEM223A0PJW6 202 aa3.88□□□□□ -1.79
PTCD3-208ENST00000469585 SYS1-DBNDD2H3BUS1 97 aa3.88□□□□□ -1.79
PTCD3-208ENST00000469585 LEPROTO15243 131 aa3.88□□□□□ -1.79
PTCD3-208ENST00000469585 NDUFA12Q9UI09 145 aa3.88□□□□□ -1.79
PTCD3-208ENST00000469585 RYR3Q15413 4870 aa3.88□□□□□ -1.79
PTCD3-208ENST00000469585 NUPR1O60356 82 aa3.87□□□□□ -1.79
PTCD3-208ENST00000469585 C1orf137Q5JT78 98 aa3.87□□□□□ -1.79
PTCD3-208ENST00000469585 ZNF625Q96I27 306 aaPredicted RBP3.87□□□□□ -1.79
PTCD3-208ENST00000469585 XAGE1AQ9HD64 81 aa3.87□□□□□ -1.79
PTCD3-208ENST00000469585 TP73-AS1Q9UF72 201 aa3.87□□□□□ -1.79
PTCD3-208ENST00000469585 HYDINQ4G0P3 5121 aa3.87□□□□□ -1.79
PTCD3-208ENST00000469585 J3QQQ9 107 aa3.86□□□□□ -1.79
PTCD3-208ENST00000469585 PRR3P79522 188 aaKnown RBP3.86□□□□□ -1.79
PTCD3-208ENST00000469585 SCGB1D4Q6XE38 83 aa3.86□□□□□ -1.79
PTCD3-208ENST00000469585 MRPL55Q7Z7F7 128 aaKnown RBP3.86□□□□□ -1.79
PTCD3-208ENST00000469585 PANO1I0J062 215 aa3.85□□□□□ -1.79
PTCD3-208ENST00000469585 RPL28P46779 137 aaKnown RBP3.85□□□□□ -1.79
PTCD3-208ENST00000469585 UBE2AP49459 152 aa3.85□□□□□ -1.79
PTCD3-208ENST00000469585 HNRNPA3P51991 378 aaKnown RBP3.85□□□□□ -1.79
PTCD3-208ENST00000469585 SPINK6Q6UWN8 80 aa3.85□□□□□ -1.79
PTCD3-208ENST00000469585 PHF5AQ7RTV0 110 aaKnown RBP3.85□□□□□ -1.79
PTCD3-208ENST00000469585 DIRC1Q969H9 104 aa3.85□□□□□ -1.79
PTCD3-208ENST00000469585 PMCHL2Q9BQD1 86 aa3.85□□□□□ -1.79
PTCD3-208ENST00000469585 HECTD4Q9Y4D8 3996 aa3.85□□□□□ -1.79
PTCD3-208ENST00000469585 FRAS1Q86XX4 4008 aa3.85□□□□□ -1.79
PTCD3-208ENST00000469585 A0A1W2PNN7 141 aa3.84□□□□□ -1.79
PTCD3-208ENST00000469585 E9PLD3 99 aa3.84□□□□□ -1.79
PTCD3-208ENST00000469585 OXTP01178 125 aa3.84□□□□□ -1.79
PTCD3-208ENST00000469585 HINT1P49773 126 aaPredicted RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 155.1 ms