RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 DEFB113Q30KQ7 82 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 LCE3AQ5TA76 89 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 C1orf134Q5TEV5 83 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 C10orf113Q5VZT2 155 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 CASC2Q6XLA1 102 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 TSKUQ8WUA8 353 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 TVP23CQ96ET8 276 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 NPVFQ9HCQ7 196 aa2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 TIMM8BQ9Y5J9 83 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 USP9YO00507 2555 aaPredicted RBP2.06□□□□□ -2.08
HMGB1P25-201ENST00000468402 MUC4Q99102 2169 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 LRRK2Q5S007 2527 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 IGLV10-54A0A075B6I4 117 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 A0A096LNT2 108 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 IGKV2D-26A0A0A0MRZ7 120 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 I3L2K1 104 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 M0R3E3 92 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 CTSGP08311 255 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 SPANXN1Q5VSR9 72 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 Q6AWC8 147 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 Q8N6K4 173 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 C5orf56Q8N8D9 126 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 Q8TAT8 98 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 FAM167A-AS1Q96KT0 104 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 NF1P21359 2839 aa2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 FASNP49327 2511 aaKnown RBP2.05□□□□□ -2.08
HMGB1P25-201ENST00000468402 TRAV10A0A0B4J240 114 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 A0A1W2PNN7 141 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 MYO9AB2RTY4 2548 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 B4DSR2 109 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 F2Z2F3 143 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 NDUFA3O95167 84 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 PRB2P02812 416 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 IGLC1P0CG04 106 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 ROMO1P60602 79 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 LINC00322Q6ZN03 302 aaPredicted RBP2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 FOXI2Q6ZQN5 318 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 Q8N814 137 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 CCDC168Q8NDH2 2452 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 DYNLRB2Q8TF09 96 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 C4orf3Q8WVX3 66 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 DNHD1Q96M86 4753 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 PSORS1C2Q9UIG4 136 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 HECTD1Q9ULT8 2610 aa2.04□□□□□ -2.08
HMGB1P25-201ENST00000468402 TRAV2A0A0B4J234 112 aa2.03□□□□□ -2.08
HMGB1P25-201ENST00000468402 OOSP1A8MZH6 123 aa2.03□□□□□ -2.08
HMGB1P25-201ENST00000468402 H3BRN7 92 aa2.03□□□□□ -2.08
HMGB1P25-201ENST00000468402 MIFP14174 115 aa2.03□□□□□ -2.08
HMGB1P25-201ENST00000468402 CBLN1P23435 193 aa2.03□□□□□ -2.08
HMGB1P25-201ENST00000468402 SERF2P84101 59 aa2.03□□□□□ -2.08
HMGB1P25-201ENST00000468402 ELOBQ15370 118 aa2.03□□□□□ -2.08
HMGB1P25-201ENST00000468402 IQCJQ1A5X6 159 aa2.03□□□□□ -2.08
HMGB1P25-201ENST00000468402 MINOS1Q5TGZ0 78 aa2.03□□□□□ -2.08
HMGB1P25-201ENST00000468402 Q8N2B8 174 aa2.03□□□□□ -2.08
HMGB1P25-201ENST00000468402 TRGV9Q99603 122 aa2.03□□□□□ -2.08
HMGB1P25-201ENST00000468402 MANBALQ9NQG1 85 aa2.03□□□□□ -2.08
HMGB1P25-201ENST00000468402 RABAC1Q9UI14 185 aa2.03□□□□□ -2.08
HMGB1P25-201ENST00000468402 HELZ2Q9BYK8 2649 aaKnown RBP2.03□□□□□ -2.09
HMGB1P25-201ENST00000468402 NAV2Q8IVL1 2488 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 A0A1W2PNM2 257 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 CLPSL1A2RUU4 121 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 NUPR1O60356 82 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 HTN1P15515 57 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 ATP5EP56381 51 aaPredicted RBP2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 KRTDAPP60985 99 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 UBE2G1P62253 170 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 PMCHL1Q16048 86 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 KRTAP13-3Q3SY46 172 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 BAGE2Q86Y30 109 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 LINC00304Q8N9R0 145 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 WFDC10AQ9H1F0 79 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 PRO1933Q9H354 126 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 SMCO4Q9NRQ5 59 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 ARL2-SNX15V9GYD0 113 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 UNC79Q9P2D8 2635 aa2.02□□□□□ -2.09
HMGB1P25-201ENST00000468402 SETXQ7Z333 2677 aaKnown RBP2.01□□□□□ -2.09
HMGB1P25-201ENST00000468402 SETD2Q9BYW2 2564 aaPredicted RBP2.01□□□□□ -2.09
HMGB1P25-201ENST00000468402 IGLV1-51P01701 117 aa2.01□□□□□ -2.09
HMGB1P25-201ENST00000468402 GDF5OSQ5U4N7 250 aa2.01□□□□□ -2.09
HMGB1P25-201ENST00000468402 Q86TA4 180 aa2.01□□□□□ -2.09
HMGB1P25-201ENST00000468402 TMEM141Q96I45 108 aa2.01□□□□□ -2.09
HMGB1P25-201ENST00000468402 TMEM167BQ9NRX6 74 aa2.01□□□□□ -2.09
HMGB1P25-201ENST00000468402 KLK9Q9UKQ9 250 aa2.01□□□□□ -2.09
HMGB1P25-201ENST00000468402 BAHCC1Q9P281 2608 aa2.01□□□□□ -2.09
HMGB1P25-201ENST00000468402 FN1P02751 2386 aaKnown RBP2□□□□□ -2.09
HMGB1P25-201ENST00000468402 A0A087WSZ3 146 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 TRAV12-1A0A0B4J245 112 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 A6NN06 94 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 ARMS2P0C7Q2 107 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 CRIP1P50238 77 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 MIR22HGQ0VDD5 57 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 PSMG4Q5JS54 123 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 S100A7L2Q5SY68 101 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 Q6ZTI0 123 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 C5orf38Q86SI9 138 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 FAM19A2Q8N3H0 131 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 MYOZ3Q8TDC0 251 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 C20orf166-AS1Q96NR2 134 aa2□□□□□ -2.09
HMGB1P25-201ENST00000468402 Q9BRP9 147 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms