RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 LINC00158P58513 81 aa14.37□□□□□ -0.11
SUMO3-205ENST00000466861 MRPL55Q7Z7F7 128 aaKnown RBP14.37□□□□□ -0.11
SUMO3-205ENST00000466861 LGALS3P17931 250 aaKnown RBP14.36□□□□□ -0.11
SUMO3-205ENST00000466861 TSPEAR-AS2P59090 65 aa14.36□□□□□ -0.11
SUMO3-205ENST00000466861 KRTDAPP60985 99 aa14.36□□□□□ -0.11
SUMO3-205ENST00000466861 RPL24P83731 157 aaKnown RBP14.36□□□□□ -0.11
SUMO3-205ENST00000466861 SRSF9Q13242 221 aaKnown RBP eCLIP14.36□□□□□ -0.11
SUMO3-205ENST00000466861 C20orf202A1L168 122 aa14.35□□□□□ -0.11
SUMO3-205ENST00000466861 MEIG1Q5JSS6 88 aa14.35□□□□□ -0.11
SUMO3-205ENST00000466861 S100A6P06703 90 aa14.34□□□□□ -0.11
SUMO3-205ENST00000466861 C1orf137Q5JT78 98 aa14.34□□□□□ -0.11
SUMO3-205ENST00000466861 KRTAP11-1Q8IUC1 163 aa14.34□□□□□ -0.11
SUMO3-205ENST00000466861 NKAPP1Q8N9T2 125 aa14.34□□□□□ -0.11
SUMO3-205ENST00000466861 HIST3H2BBQ8N257 126 aa14.33□□□□□ -0.12
SUMO3-205ENST00000466861 MYCBP2O75592 4640 aa14.32□□□□□ -0.12
SUMO3-205ENST00000466861 SMIM13P0DJ93 91 aa14.32□□□□□ -0.12
SUMO3-205ENST00000466861 VPREB1P12018 145 aa14.32□□□□□ -0.12
SUMO3-205ENST00000466861 IGLV7-43P04211 117 aa14.31□□□□□ -0.12
SUMO3-205ENST00000466861 S100A2P29034 98 aa14.31□□□□□ -0.12
SUMO3-205ENST00000466861 DMBT1Q9UGM3 2413 aaPredicted RBP14.31□□□□□ -0.12
SUMO3-205ENST00000466861 LINC00167Q96N53 147 aa14.3□□□□□ -0.12
SUMO3-205ENST00000466861 MIR7-3HGQ8N6C7 128 aa14.29□□□□□ -0.12
SUMO3-205ENST00000466861 J3QL48 77 aa14.28□□□□□ -0.12
SUMO3-205ENST00000466861 HIST1H2BLQ99880 126 aa14.28□□□□□ -0.12
SUMO3-205ENST00000466861 A0A0U1RRA0 63 aa14.27□□□□□ -0.13
SUMO3-205ENST00000466861 LOC107984156A0A0G2JMH3 177 aa14.26□□□□□ -0.13
SUMO3-205ENST00000466861 REG3GQ6UW15 175 aa14.26□□□□□ -0.13
SUMO3-205ENST00000466861 ARL17AQ8IVW1 177 aa14.26□□□□□ -0.13
SUMO3-205ENST00000466861 DIRC1Q969H9 104 aa14.24□□□□□ -0.13
SUMO3-205ENST00000466861 SNRPEP62304 92 aaKnown RBP14.23□□□□□ -0.13
SUMO3-205ENST00000466861 IGLV1-50A0A075B6I6 118 aa14.21□□□□□ -0.13
SUMO3-205ENST00000466861 IGKV2D-26A0A0A0MRZ7 120 aa14.21□□□□□ -0.13
SUMO3-205ENST00000466861 A0A0J9YXY3 114 aa14.21□□□□□ -0.13
SUMO3-205ENST00000466861 GAGE10A6NGK3 116 aa14.21□□□□□ -0.13
SUMO3-205ENST00000466861 RPL37AP8A6NKH3 93 aa14.21□□□□□ -0.13
SUMO3-205ENST00000466861 BCE1O60756 84 aa14.21□□□□□ -0.13
SUMO3-205ENST00000466861 BOD1L2Q8IYS8 172 aa14.21□□□□□ -0.13
SUMO3-205ENST00000466861 Q8NDZ9 215 aa14.21□□□□□ -0.13
SUMO3-205ENST00000466861 C5orf52A6NGY3 159 aa14.2□□□□□ -0.14
SUMO3-205ENST00000466861 M0R378 163 aa14.2□□□□□ -0.14
SUMO3-205ENST00000466861 TIMM17BO60830 172 aa14.2□□□□□ -0.14
SUMO3-205ENST00000466861 ZNF861PO60384 105 aa14.19□□□□□ -0.14
SUMO3-205ENST00000466861 LINC01600Q96MT4 127 aa14.19□□□□□ -0.14
SUMO3-205ENST00000466861 FAT3Q8TDW7 4589 aa14.18□□□□□ -0.14
SUMO3-205ENST00000466861 LRP1Q07954 4544 aaKnown RBP14.18□□□□□ -0.14
SUMO3-205ENST00000466861 ZNF815PA8K554 130 aa14.17□□□□□ -0.14
SUMO3-205ENST00000466861 H0Y9J4 135 aa14.17□□□□□ -0.14
SUMO3-205ENST00000466861 MIEN1Q9BRT3 115 aa14.17□□□□□ -0.14
SUMO3-205ENST00000466861 RPL28P46779 137 aaKnown RBP14.16□□□□□ -0.14
SUMO3-205ENST00000466861 IGKV2-28A0A075B6P5 120 aa14.15□□□□□ -0.14
SUMO3-205ENST00000466861 NDUFC2O95298 119 aa14.15□□□□□ -0.14
SUMO3-205ENST00000466861 IGKV2D-28P01615 120 aa14.15□□□□□ -0.14
SUMO3-205ENST00000466861 DAND5Q8N907 189 aa14.14□□□□□ -0.15
SUMO3-205ENST00000466861 TRBV10-2A0A0K0K1G8 114 aa14.13□□□□□ -0.15
SUMO3-205ENST00000466861 ANKRD39Q53RE8 183 aa14.13□□□□□ -0.15
SUMO3-205ENST00000466861 ATOH7Q8N100 152 aa14.13□□□□□ -0.15
SUMO3-205ENST00000466861 MT1HL1P0DM35 61 aa14.12□□□□□ -0.15
SUMO3-205ENST00000466861 ADAMTSL4-AS1Q5T5F5 129 aa14.12□□□□□ -0.15
SUMO3-205ENST00000466861 LITAFQ99732 161 aa14.12□□□□□ -0.15
SUMO3-205ENST00000466861 TMEM126AQ9H061 195 aa14.11□□□□□ -0.15
SUMO3-205ENST00000466861 KRTAP13-1Q8IUC0 172 aa14.1□□□□□ -0.15
SUMO3-205ENST00000466861 SPANXB1Q9NS25 103 aaPredicted RBP14.1□□□□□ -0.15
SUMO3-205ENST00000466861 HSBP1L1C9JCN9 74 aa14.08□□□□□ -0.16
SUMO3-205ENST00000466861 PRYO14603 147 aa14.08□□□□□ -0.16
SUMO3-205ENST00000466861 UBE2AP49459 152 aa14.08□□□□□ -0.16
SUMO3-205ENST00000466861 TTTY13Q9BZ97 58 aa14.08□□□□□ -0.16
SUMO3-205ENST00000466861 NCR3O14931 201 aa14.07□□□□□ -0.16
SUMO3-205ENST00000466861 S100A12P80511 92 aa14.07□□□□□ -0.16
SUMO3-205ENST00000466861 KCNQ1DNQ9H478 68 aa14.07□□□□□ -0.16
SUMO3-205ENST00000466861 KRTAP10-8P60410 259 aa14.06□□□□□ -0.16
SUMO3-205ENST00000466861 SOSTDC1Q6X4U4 206 aa14.06□□□□□ -0.16
SUMO3-205ENST00000466861 LINC00308Q8TCZ7 52 aa14.06□□□□□ -0.16
SUMO3-205ENST00000466861 TMEM238C9JI98 176 aa14.05□□□□□ -0.16
SUMO3-205ENST00000466861 SCGB1D4Q6XE38 83 aa14.05□□□□□ -0.16
SUMO3-205ENST00000466861 Q6ZVH6 145 aa14.05□□□□□ -0.16
SUMO3-205ENST00000466861 PPDPFQ9H3Y8 114 aa14.05□□□□□ -0.16
SUMO3-205ENST00000466861 COPS9Q8WXC6 57 aa14.04□□□□□ -0.16
SUMO3-205ENST00000466861 SPANXDQ9BXN6 97 aa14.04□□□□□ -0.16
SUMO3-205ENST00000466861 SPANXCQ9NY87 97 aa14.04□□□□□ -0.16
SUMO3-205ENST00000466861 TRBV10-3A0A0K0K1G6 114 aa14.03□□□□□ -0.16
SUMO3-205ENST00000466861 SPRR1AP35321 89 aa14.03□□□□□ -0.16
SUMO3-205ENST00000466861 FAM19A1Q7Z5A9 133 aa14.03□□□□□ -0.16
SUMO3-205ENST00000466861 LINC00337Q8N6G1 96 aa14.03□□□□□ -0.16
SUMO3-205ENST00000466861 SCGB1D1O95968 90 aa14.02□□□□□ -0.17
SUMO3-205ENST00000466861 KRTAP1-4P0C5Y4 121 aa14.02□□□□□ -0.17
SUMO3-205ENST00000466861 PCP2Q8IVA1 136 aa14.02□□□□□ -0.17
SUMO3-205ENST00000466861 EIF4EBP3O60516 100 aaPredicted RBP14.01□□□□□ -0.17
SUMO3-205ENST00000466861 DDTP30046 118 aa14.01□□□□□ -0.17
SUMO3-205ENST00000466861 CBY1Q9Y3M2 126 aa14.01□□□□□ -0.17
SUMO3-205ENST00000466861 IGLV6-57P01721 117 aa14□□□□□ -0.17
SUMO3-205ENST00000466861 IFITM1P13164 125 aa14□□□□□ -0.17
SUMO3-205ENST00000466861 NPC2P61916 151 aa14□□□□□ -0.17
SUMO3-205ENST00000466861 S100A7L2Q5SY68 101 aa13.98□□□□□ -0.17
SUMO3-205ENST00000466861 PRLHP81277 87 aa13.97□□□□□ -0.17
SUMO3-205ENST00000466861 LINC00518Q8N0U6 118 aa13.97□□□□□ -0.17
SUMO3-205ENST00000466861 TNXBP22105 4242 aa13.97□□□□□ -0.17
SUMO3-205ENST00000466861 KRTAP4-16G5E9R7 235 aaPredicted RBP13.96□□□□□ -0.17
SUMO3-205ENST00000466861 RPL13AP40429 203 aaKnown RBP13.96□□□□□ -0.17
SUMO3-205ENST00000466861 HERC1Q15751 4861 aa13.96□□□□□ -0.18
SUMO3-205ENST00000466861 ETDCA0A1B0GVM5 59 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms