RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 TMEM126AQ9H061 195 aa10.83□□□□□ -0.68
SRSF4-202ENST00000466448 NDUFA6P56556 154 aa10.82□□□□□ -0.68
SRSF4-202ENST00000466448 VPREB1P12018 145 aa10.81□□□□□ -0.68
SRSF4-202ENST00000466448 CTAG1AP78358 180 aa10.81□□□□□ -0.68
SRSF4-202ENST00000466448 PMCHL1Q16048 86 aa10.81□□□□□ -0.68
SRSF4-202ENST00000466448 H3BRM9 83 aa10.8□□□□□ -0.68
SRSF4-202ENST00000466448 TRGC2P03986 189 aa10.8□□□□□ -0.68
SRSF4-202ENST00000466448 BAGE3Q86Y29 109 aa10.8□□□□□ -0.68
SRSF4-202ENST00000466448 SND1-IT1Q9HBX3 110 aa10.8□□□□□ -0.68
SRSF4-202ENST00000466448 M0R378 163 aa10.79□□□□□ -0.68
SRSF4-202ENST00000466448 C3orf22Q8N5N4 141 aa10.79□□□□□ -0.68
SRSF4-202ENST00000466448 PLEKHB2Q96CS7 222 aa10.79□□□□□ -0.68
SRSF4-202ENST00000466448 PPDPFQ9H3Y8 114 aa10.79□□□□□ -0.68
SRSF4-202ENST00000466448 IGLV5-39A0A0G2JS06 123 aa10.78□□□□□ -0.68
SRSF4-202ENST00000466448 IGLC3P0DOY3 106 aa10.78□□□□□ -0.68
SRSF4-202ENST00000466448 COLCA2A8K830 154 aa10.77□□□□□ -0.69
SRSF4-202ENST00000466448 HSBP1O75506 76 aa10.77□□□□□ -0.69
SRSF4-202ENST00000466448 Q8NDZ9 215 aa10.77□□□□□ -0.69
SRSF4-202ENST00000466448 ERG28Q9UKR5 140 aa10.77□□□□□ -0.69
SRSF4-202ENST00000466448 RPL24P83731 157 aaKnown RBP10.75□□□□□ -0.69
SRSF4-202ENST00000466448 IFI27L1Q96BM0 104 aa10.74□□□□□ -0.69
SRSF4-202ENST00000466448 COX17Q14061 63 aa10.73□□□□□ -0.69
SRSF4-202ENST00000466448 ZNF625Q96I27 306 aaPredicted RBP10.73□□□□□ -0.69
SRSF4-202ENST00000466448 HIGD2AQ9BW72 106 aa10.73□□□□□ -0.69
SRSF4-202ENST00000466448 TRAV12-1A0A0B4J245 112 aa10.72□□□□□ -0.69
SRSF4-202ENST00000466448 ZNF22P17026 224 aaPredicted RBP10.72□□□□□ -0.69
SRSF4-202ENST00000466448 CHTOPQ9Y3Y2 248 aaKnown RBP10.72□□□□□ -0.69
SRSF4-202ENST00000466448 SPAG11AQ6PDA7 123 aa10.71□□□□□ -0.69
SRSF4-202ENST00000466448 FAM19A2Q8N3H0 131 aa10.7□□□□□ -0.7
SRSF4-202ENST00000466448 SPRR4Q96PI1 79 aa10.7□□□□□ -0.7
SRSF4-202ENST00000466448 C11orf86A6NJI1 115 aa10.69□□□□□ -0.7
SRSF4-202ENST00000466448 SERF1AO75920 110 aa10.69□□□□□ -0.7
SRSF4-202ENST00000466448 TMEM170BQ5T4T1 132 aa10.69□□□□□ -0.7
SRSF4-202ENST00000466448 FP248Q71RG6 208 aaPredicted RBP10.69□□□□□ -0.7
SRSF4-202ENST00000466448 LEPROTL1O95214 131 aa10.67□□□□□ -0.7
SRSF4-202ENST00000466448 KRTAP13-3Q3SY46 172 aa10.67□□□□□ -0.7
SRSF4-202ENST00000466448 SFTA2Q6UW10 78 aa10.66□□□□□ -0.7
SRSF4-202ENST00000466448 LINC00337Q8N6G1 96 aa10.66□□□□□ -0.7
SRSF4-202ENST00000466448 HSPB8Q9UJY1 196 aa10.66□□□□□ -0.7
SRSF4-202ENST00000466448 LINC00310P59036 64 aa10.65□□□□□ -0.7
SRSF4-202ENST00000466448 C4orf48Q5BLP8 95 aa10.65□□□□□ -0.7
SRSF4-202ENST00000466448 DAND5Q8N907 189 aa10.65□□□□□ -0.7
SRSF4-202ENST00000466448 ASB16-AS1Q495Z4 193 aa10.64□□□□□ -0.71
SRSF4-202ENST00000466448 Q8NBF4 154 aa10.64□□□□□ -0.71
SRSF4-202ENST00000466448 ZNF706Q9Y5V0 76 aaPredicted RBP10.64□□□□□ -0.71
SRSF4-202ENST00000466448 TMEM223A0PJW6 202 aa10.62□□□□□ -0.71
SRSF4-202ENST00000466448 LINC00158P58513 81 aa10.62□□□□□ -0.71
SRSF4-202ENST00000466448 A0A0U1RRA0 63 aa10.61□□□□□ -0.71
SRSF4-202ENST00000466448 H0Y8G0 127 aa10.61□□□□□ -0.71
SRSF4-202ENST00000466448 FABP4P15090 132 aa10.61□□□□□ -0.71
SRSF4-202ENST00000466448 KRTAP4-1Q9BYQ7 146 aa10.61□□□□□ -0.71
SRSF4-202ENST00000466448 HIST1H2BKO60814 126 aa10.6□□□□□ -0.71
SRSF4-202ENST00000466448 HIST1H2BJP06899 126 aa10.6□□□□□ -0.71
SRSF4-202ENST00000466448 HIST1H2BOP23527 126 aa10.6□□□□□ -0.71
SRSF4-202ENST00000466448 HIST1H2BBP33778 126 aa10.6□□□□□ -0.71
SRSF4-202ENST00000466448 HIST1H2BDP58876 126 aa10.6□□□□□ -0.71
SRSF4-202ENST00000466448 HIST1H2BCP62807 126 aa10.6□□□□□ -0.71
SRSF4-202ENST00000466448 HIST2H2BEQ16778 126 aa10.6□□□□□ -0.71
SRSF4-202ENST00000466448 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.6□□□□□ -0.71
SRSF4-202ENST00000466448 HIST1H2BHQ93079 126 aa10.6□□□□□ -0.71
SRSF4-202ENST00000466448 HIST1H2BNQ99877 126 aa10.6□□□□□ -0.71
SRSF4-202ENST00000466448 HIST1H2BMQ99879 126 aa10.6□□□□□ -0.71
SRSF4-202ENST00000466448 PRYO14603 147 aa10.58□□□□□ -0.72
SRSF4-202ENST00000466448 PLNP26678 52 aa10.58□□□□□ -0.72
SRSF4-202ENST00000466448 LINC01547P58512 204 aaPredicted RBP10.58□□□□□ -0.72
SRSF4-202ENST00000466448 SPINK1P00995 79 aa10.57□□□□□ -0.72
SRSF4-202ENST00000466448 SPRR1AP35321 89 aa10.57□□□□□ -0.72
SRSF4-202ENST00000466448 SMCR5Q8TEV8 140 aa10.57□□□□□ -0.72
SRSF4-202ENST00000466448 MAP1LC3CQ9BXW4 147 aa10.57□□□□□ -0.72
SRSF4-202ENST00000466448 KCNQ1DNQ9H478 68 aa10.56□□□□□ -0.72
SRSF4-202ENST00000466448 KRTAP4-16G5E9R7 235 aaPredicted RBP10.55□□□□□ -0.72
SRSF4-202ENST00000466448 NCR3O14931 201 aa10.55□□□□□ -0.72
SRSF4-202ENST00000466448 DPM2O94777 84 aa10.55□□□□□ -0.72
SRSF4-202ENST00000466448 BOD1L2Q8IYS8 172 aa10.55□□□□□ -0.72
SRSF4-202ENST00000466448 SMIM13P0DJ93 91 aa10.54□□□□□ -0.72
SRSF4-202ENST00000466448 S100A1P23297 94 aa10.54□□□□□ -0.72
SRSF4-202ENST00000466448 SEC61BP60468 96 aaKnown RBP10.54□□□□□ -0.72
SRSF4-202ENST00000466448 LINC00483Q53H64 154 aa10.54□□□□□ -0.72
SRSF4-202ENST00000466448 HERV-K104P63124 156 aa10.53□□□□□ -0.72
SRSF4-202ENST00000466448 LCE2DQ5TA82 110 aaPredicted RBP10.53□□□□□ -0.72
SRSF4-202ENST00000466448 ETDCA0A1B0GVM5 59 aa10.52□□□□□ -0.73
SRSF4-202ENST00000466448 LINC00587B1AMM8 73 aa10.52□□□□□ -0.73
SRSF4-202ENST00000466448 IGKCP01834 107 aa10.52□□□□□ -0.73
SRSF4-202ENST00000466448 HERVK_113P61574 105 aa10.52□□□□□ -0.73
SRSF4-202ENST00000466448 FSIP2Q5CZC0 6907 aa10.51□□□□□ -0.73
SRSF4-202ENST00000466448 ATP6V1G1O75348 118 aa10.51□□□□□ -0.73
SRSF4-202ENST00000466448 MIR7-3HGQ8N6C7 128 aa10.51□□□□□ -0.73
SRSF4-202ENST00000466448 TRBV10-3A0A0K0K1G6 114 aa10.5□□□□□ -0.73
SRSF4-202ENST00000466448 MYMXA0A1B0GTQ4 84 aa10.5□□□□□ -0.73
SRSF4-202ENST00000466448 LEPROTO15243 131 aa10.5□□□□□ -0.73
SRSF4-202ENST00000466448 MEIG1Q5JSS6 88 aa10.5□□□□□ -0.73
SRSF4-202ENST00000466448 GAGE2AQ6NT46 116 aa10.5□□□□□ -0.73
SRSF4-202ENST00000466448 Q8N377 158 aa10.5□□□□□ -0.73
SRSF4-202ENST00000466448 PMCHL2Q9BQD1 86 aa10.5□□□□□ -0.73
SRSF4-202ENST00000466448 NDUFA12Q9UI09 145 aa10.5□□□□□ -0.73
SRSF4-202ENST00000466448 IGLV9-49A0A0B4J1Y8 123 aa10.49□□□□□ -0.73
SRSF4-202ENST00000466448 RPS29P62273 56 aaKnown RBP10.49□□□□□ -0.73
SRSF4-202ENST00000466448 MOBPQ13875 183 aa10.49□□□□□ -0.73
SRSF4-202ENST00000466448 COA6Q5JTJ3 125 aaKnown RBP10.49□□□□□ -0.73
SRSF4-202ENST00000466448 SYS1-DBNDD2H3BUS1 97 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms