RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 J3QQQ9 107 aa11.69□□□□□ -0.54
HMG20B-208ENST00000464304 SERTAD4-AS1Q5TG53 156 aa11.69□□□□□ -0.54
HMG20B-208ENST00000464304 LGALS3P17931 250 aaKnown RBP11.68□□□□□ -0.54
HMG20B-208ENST00000464304 COX17Q14061 63 aa11.68□□□□□ -0.54
HMG20B-208ENST00000464304 A0A0U1RRA0 63 aa11.66□□□□□ -0.54
HMG20B-208ENST00000464304 MYMXA0A1B0GTQ4 84 aa11.66□□□□□ -0.54
HMG20B-208ENST00000464304 HSBP1L1C9JCN9 74 aa11.66□□□□□ -0.54
HMG20B-208ENST00000464304 M0QXV9 152 aa11.66□□□□□ -0.54
HMG20B-208ENST00000464304 NMUP48645 174 aa11.66□□□□□ -0.54
HMG20B-208ENST00000464304 HERV-K104P63124 156 aa11.66□□□□□ -0.54
HMG20B-208ENST00000464304 JOSD1Q15040 202 aaPredicted RBP11.66□□□□□ -0.54
HMG20B-208ENST00000464304 MEIG1Q5JSS6 88 aa11.66□□□□□ -0.54
HMG20B-208ENST00000464304 LINC00158P58513 81 aa11.65□□□□□ -0.54
HMG20B-208ENST00000464304 SND1-IT1Q9HBX3 110 aa11.65□□□□□ -0.54
HMG20B-208ENST00000464304 GHRHP01286 108 aa11.64□□□□□ -0.55
HMG20B-208ENST00000464304 SMIM13P0DJ93 91 aa11.64□□□□□ -0.55
HMG20B-208ENST00000464304 PRR3P79522 188 aaKnown RBP11.63□□□□□ -0.55
HMG20B-208ENST00000464304 LINC00587B1AMM8 73 aa11.62□□□□□ -0.55
HMG20B-208ENST00000464304 HNRNPA3P51991 378 aaKnown RBP11.62□□□□□ -0.55
HMG20B-208ENST00000464304 ANKRD39Q53RE8 183 aa11.62□□□□□ -0.55
HMG20B-208ENST00000464304 KRTAP11-1Q8IUC1 163 aa11.62□□□□□ -0.55
HMG20B-208ENST00000464304 PLA2G2DQ9UNK4 145 aa11.62□□□□□ -0.55
HMG20B-208ENST00000464304 C22orf24Q9Y442 160 aa11.62□□□□□ -0.55
HMG20B-208ENST00000464304 IGKV2D-26A0A0A0MRZ7 120 aa11.61□□□□□ -0.55
HMG20B-208ENST00000464304 MIR7-3HGQ8N6C7 128 aa11.6□□□□□ -0.55
HMG20B-208ENST00000464304 PSORS1C2Q9UIG4 136 aa11.59□□□□□ -0.55
HMG20B-208ENST00000464304 IGLV5-37A0A075B6J1 123 aa11.58□□□□□ -0.56
HMG20B-208ENST00000464304 ZNF815PA8K554 130 aa11.58□□□□□ -0.56
HMG20B-208ENST00000464304 UBE2BP63146 152 aa11.58□□□□□ -0.56
HMG20B-208ENST00000464304 TP73-AS1Q9UF72 201 aa11.58□□□□□ -0.56
HMG20B-208ENST00000464304 SRRM2Q9UQ35 2752 aaKnown RBP11.58□□□□□ -0.56
HMG20B-208ENST00000464304 VPREB1P12018 145 aa11.57□□□□□ -0.56
HMG20B-208ENST00000464304 PYY3Q5JQD4 70 aa11.57□□□□□ -0.56
HMG20B-208ENST00000464304 MRPL55Q7Z7F7 128 aaKnown RBP11.57□□□□□ -0.56
HMG20B-208ENST00000464304 Q8NDZ9 215 aa11.57□□□□□ -0.56
HMG20B-208ENST00000464304 TTTY13Q9BZ97 58 aa11.57□□□□□ -0.56
HMG20B-208ENST00000464304 A0A0J9YXY3 114 aa11.56□□□□□ -0.56
HMG20B-208ENST00000464304 DAND5Q8N907 189 aa11.56□□□□□ -0.56
HMG20B-208ENST00000464304 NKAPP1Q8N9T2 125 aa11.56□□□□□ -0.56
HMG20B-208ENST00000464304 VAMP8Q9BV40 100 aa11.56□□□□□ -0.56
HMG20B-208ENST00000464304 UBR4Q5T4S7 5183 aa11.56□□□□□ -0.56
HMG20B-208ENST00000464304 LBHQ53QV2 105 aaPredicted RBP11.55□□□□□ -0.56
HMG20B-208ENST00000464304 C1orf137Q5JT78 98 aa11.54□□□□□ -0.56
HMG20B-208ENST00000464304 LINC00167Q96N53 147 aa11.54□□□□□ -0.56
HMG20B-208ENST00000464304 PKHD1L1Q86WI1 4243 aa11.53□□□□□ -0.56
HMG20B-208ENST00000464304 GAGE10A6NGK3 116 aa11.53□□□□□ -0.56
HMG20B-208ENST00000464304 RPL24P83731 157 aaKnown RBP11.53□□□□□ -0.56
HMG20B-208ENST00000464304 PCP2Q8IVA1 136 aa11.53□□□□□ -0.56
HMG20B-208ENST00000464304 SPATA45Q537H7 98 aa11.52□□□□□ -0.57
HMG20B-208ENST00000464304 PAM16Q9Y3D7 125 aa11.52□□□□□ -0.57
HMG20B-208ENST00000464304 RPL37AP8A6NKH3 93 aa11.51□□□□□ -0.57
HMG20B-208ENST00000464304 SCGB1D4Q6XE38 83 aa11.51□□□□□ -0.57
HMG20B-208ENST00000464304 BOD1L2Q8IYS8 172 aa11.51□□□□□ -0.57
HMG20B-208ENST00000464304 TIMM17BO60830 172 aa11.5□□□□□ -0.57
HMG20B-208ENST00000464304 ADAMTSL4-AS1Q5T5F5 129 aa11.5□□□□□ -0.57
HMG20B-208ENST00000464304 LITAFQ99732 161 aa11.49□□□□□ -0.57
HMG20B-208ENST00000464304 LOC107984156A0A0G2JMH3 177 aa11.48□□□□□ -0.57
HMG20B-208ENST00000464304 IGLV7-43P04211 117 aa11.48□□□□□ -0.57
HMG20B-208ENST00000464304 SRSF9Q13242 221 aaKnown RBP eCLIP11.48□□□□□ -0.57
HMG20B-208ENST00000464304 ARL17AQ8IVW1 177 aa11.48□□□□□ -0.57
HMG20B-208ENST00000464304 LOC105371267A0A1B0GV96 52 aa11.47□□□□□ -0.57
HMG20B-208ENST00000464304 COX8AP10176 69 aa11.47□□□□□ -0.57
HMG20B-208ENST00000464304 NPC2P61916 151 aa11.47□□□□□ -0.57
HMG20B-208ENST00000464304 S100A12P80511 92 aa11.47□□□□□ -0.57
HMG20B-208ENST00000464304 SOSTDC1Q6X4U4 206 aa11.47□□□□□ -0.57
HMG20B-208ENST00000464304 IGKV2-28A0A075B6P5 120 aa11.46□□□□□ -0.57
HMG20B-208ENST00000464304 TMEM238C9JI98 176 aa11.46□□□□□ -0.57
HMG20B-208ENST00000464304 IGKV2D-28P01615 120 aa11.46□□□□□ -0.57
HMG20B-208ENST00000464304 NCR3O14931 201 aa11.45□□□□□ -0.58
HMG20B-208ENST00000464304 EIF4EBP3O60516 100 aaPredicted RBP11.45□□□□□ -0.58
HMG20B-208ENST00000464304 SPINK6Q6UWN8 80 aa11.45□□□□□ -0.58
HMG20B-208ENST00000464304 MIEN1Q9BRT3 115 aa11.45□□□□□ -0.58
HMG20B-208ENST00000464304 IGLV1-50A0A075B6I6 118 aa11.44□□□□□ -0.58
HMG20B-208ENST00000464304 M0R378 163 aa11.44□□□□□ -0.58
HMG20B-208ENST00000464304 DLEU1O43261 78 aa11.44□□□□□ -0.58
HMG20B-208ENST00000464304 SMIM6P0DI80 62 aa11.44□□□□□ -0.58
HMG20B-208ENST00000464304 C14orf144Q96I85 54 aa11.43□□□□□ -0.58
HMG20B-208ENST00000464304 SLC25A34Q6PIV7 304 aa11.42□□□□□ -0.58
HMG20B-208ENST00000464304 Q6ZVH6 145 aa11.42□□□□□ -0.58
HMG20B-208ENST00000464304 SPANXDQ9BXN6 97 aa11.42□□□□□ -0.58
HMG20B-208ENST00000464304 SPANXCQ9NY87 97 aa11.42□□□□□ -0.58
HMG20B-208ENST00000464304 LINC00308Q8TCZ7 52 aa11.41□□□□□ -0.58
HMG20B-208ENST00000464304 COPS9Q8WXC6 57 aa11.41□□□□□ -0.58
HMG20B-208ENST00000464304 HMCN2Q8NDA2 5059 aa11.41□□□□□ -0.58
HMG20B-208ENST00000464304 BCE1O60756 84 aa11.4□□□□□ -0.58
HMG20B-208ENST00000464304 KRTAP29-1A8MX34 341 aaPredicted RBP11.39□□□□□ -0.59
HMG20B-208ENST00000464304 NDUFC2O95298 119 aa11.39□□□□□ -0.59
HMG20B-208ENST00000464304 IFITM1P13164 125 aa11.38□□□□□ -0.59
HMG20B-208ENST00000464304 REG3GQ6UW15 175 aa11.38□□□□□ -0.59
HMG20B-208ENST00000464304 TMEM126AQ9H061 195 aa11.38□□□□□ -0.59
HMG20B-208ENST00000464304 SPANXB1Q9NS25 103 aaPredicted RBP11.38□□□□□ -0.59
HMG20B-208ENST00000464304 TRBV10-3A0A0K0K1G6 114 aa11.37□□□□□ -0.59
HMG20B-208ENST00000464304 TRBV10-2A0A0K0K1G8 114 aa11.37□□□□□ -0.59
HMG20B-208ENST00000464304 ZNF861PO60384 105 aa11.37□□□□□ -0.59
HMG20B-208ENST00000464304 OXTP01178 125 aa11.37□□□□□ -0.59
HMG20B-208ENST00000464304 SVIPQ8NHG7 77 aa11.37□□□□□ -0.59
HMG20B-208ENST00000464304 DIRC1Q969H9 104 aa11.36□□□□□ -0.59
HMG20B-208ENST00000464304 PPDPFQ9H3Y8 114 aa11.36□□□□□ -0.59
HMG20B-208ENST00000464304 LRP1Q07954 4544 aaKnown RBP11.35□□□□□ -0.59
HMG20B-208ENST00000464304 H0Y9J4 135 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms