RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SPINK8P0C7L1 97 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 S100A2P29034 98 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 Q6ZN92 141 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 TEX43Q6ZNM6 134 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 FAM19A3Q7Z5A8 133 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 Q8NBF4 154 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 TMEM101Q96IK0 257 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 CHAC1Q9BUX1 264 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 VCX2Q9H322 139 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 CHTOPQ9Y3Y2 248 aaKnown RBP2.3□□□□□ -2.04
SCFD1-204ENST00000463622 OBSCNQ5VST9 7968 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 PKHD1L1Q86WI1 4243 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 F8VRH5 84 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 K7EP13 123 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 CRPP02741 224 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 MT1HL1P0DM35 61 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 KIAA0087Q14695 138 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 HIGD2BQ4VC39 106 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 HSPB8Q9UJY1 196 aa2.3□□□□□ -2.04
SCFD1-204ENST00000463622 TINCRA0A1B0GVN0 87 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 TMEM223A0PJW6 202 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 AKR1D1P51857 326 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 JOSD1Q15040 202 aaPredicted RBP2.29□□□□□ -2.04
SCFD1-204ENST00000463622 MIAQ16674 131 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 LINC01620Q4KN68 170 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 PET117Q6UWS5 81 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 C2orf82Q6UX34 121 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 LINC00469Q8N7U9 141 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 MAP1LC3CQ9BXW4 147 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 TRAV9-2A0A087WT02 112 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 A0A087WZ39 114 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 DPM2O94777 84 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 IGKCP01834 107 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 SS18Q15532 418 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 TMEM170BQ5T4T1 132 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 CD164L2Q6UWJ8 174 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 C10orf126Q8N4M7 172 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 C2orf88Q9BSF0 95 aa2.29□□□□□ -2.04
SCFD1-204ENST00000463622 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-204ENST00000463622 COX7A2LO14548 114 aa2.28□□□□□ -2.04
SCFD1-204ENST00000463622 PKIAP61925 76 aa2.28□□□□□ -2.04
SCFD1-204ENST00000463622 C9orf116Q5BN46 136 aaPredicted RBP2.28□□□□□ -2.04
SCFD1-204ENST00000463622 PCP2Q8IVA1 136 aa2.28□□□□□ -2.04
SCFD1-204ENST00000463622 ORAOV1Q8WV07 137 aa2.28□□□□□ -2.04
SCFD1-204ENST00000463622 TRAV8-4A0A0B4J246 113 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 LINC01549A6NIU2 74 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 PANO1I0J062 215 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 VPREB1P12018 145 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 G0S2P27469 103 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 HERVK_113P63121 156 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 SPAG11BQ08648 103 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 LCE3AQ5TA76 89 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 UNQ6190/PRO20217Q6UXQ8 127 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 Q6ZRU5 148 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 Q8N814 137 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 PLEKHB2Q96CS7 222 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 GEMIN7Q9H840 131 aaKnown RBP2.27□□□□□ -2.05
SCFD1-204ENST00000463622 TOMM7Q9P0U1 55 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 TNXBP22105 4242 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 GVQW2A0A096LPI5 108 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-204ENST00000463622 IGHV1-58A0A0C4DH39 117 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 E9PLD3 99 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 Q8NDZ9 215 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 ZNF625Q96I27 306 aaPredicted RBP2.27□□□□□ -2.05
SCFD1-204ENST00000463622 C6orf48Q9UBA6 75 aa2.27□□□□□ -2.05
SCFD1-204ENST00000463622 A0A0U1RRA0 63 aa2.26□□□□□ -2.05
SCFD1-204ENST00000463622 LEPROTO15243 131 aa2.26□□□□□ -2.05
SCFD1-204ENST00000463622 PSCAO43653 123 aa2.26□□□□□ -2.05
SCFD1-204ENST00000463622 CHTF8P0CG12 524 aa2.26□□□□□ -2.05
SCFD1-204ENST00000463622 PLNP26678 52 aa2.26□□□□□ -2.05
SCFD1-204ENST00000463622 SMAGPQ0VAQ4 97 aa2.26□□□□□ -2.05
SCFD1-204ENST00000463622 CFAP161Q6P656 301 aa2.26□□□□□ -2.05
SCFD1-204ENST00000463622 SCXQ7RTU7 201 aa2.26□□□□□ -2.05
SCFD1-204ENST00000463622 COX7B2Q8TF08 81 aa2.26□□□□□ -2.05
SCFD1-204ENST00000463622 PRO1933Q9H354 126 aa2.26□□□□□ -2.05
SCFD1-204ENST00000463622 J3QQQ9 107 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 NMUP48645 174 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 HNRNPA3P51991 378 aaKnown RBP2.25□□□□□ -2.05
SCFD1-204ENST00000463622 SPATA45Q537H7 98 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 Q8IZM0 81 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 DAND5Q8N907 189 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 CIRBP-AS1Q8TBR5 109 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 C14orf144Q96I85 54 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 A0A0J9YXY3 114 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 C20orf202A1L168 122 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 SEC11AP67812 179 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 SOSTDC1Q6X4U4 206 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 C2orf91Q6ZV80 131 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 LINC00518Q8N0U6 118 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 LINC01561Q8N1V8 128 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 RMI2Q96E14 147 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 C12orf57Q99622 126 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 NDUFA12Q9UI09 145 aa2.25□□□□□ -2.05
SCFD1-204ENST00000463622 FAT4Q6V0I7 4981 aa2.24□□□□□ -2.05
SCFD1-204ENST00000463622 A0A096LNI7 61 aa2.24□□□□□ -2.05
SCFD1-204ENST00000463622 FAM168BA1KXE4 195 aa2.24□□□□□ -2.05
SCFD1-204ENST00000463622 ZNF815PA8K554 130 aa2.24□□□□□ -2.05
SCFD1-204ENST00000463622 H3BRM9 83 aa2.24□□□□□ -2.05
SCFD1-204ENST00000463622 NDUFA1O15239 70 aa2.24□□□□□ -2.05
SCFD1-204ENST00000463622 SMIM6P0DI80 62 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms