RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 FAM19A2Q8N3H0 131 aa4.18□□□□□ -1.74
SMC3-202ENST00000462899 IGLV5-45A0A087WSX0 123 aa4.17□□□□□ -1.74
SMC3-202ENST00000462899 IGKV2-30P06310 120 aa4.17□□□□□ -1.74
SMC3-202ENST00000462899 LINC00483Q53H64 154 aa4.17□□□□□ -1.74
SMC3-202ENST00000462899 PCOTHQ58A44 107 aa4.17□□□□□ -1.74
SMC3-202ENST00000462899 NDUFA12Q9UI09 145 aa4.17□□□□□ -1.74
SMC3-202ENST00000462899 IGLV8-61A0A075B6I0 122 aa4.16□□□□□ -1.74
SMC3-202ENST00000462899 RAB5AP20339 215 aa4.16□□□□□ -1.74
SMC3-202ENST00000462899 SEC11AP67812 179 aa4.16□□□□□ -1.74
SMC3-202ENST00000462899 PDZD11Q5EBL8 140 aa4.16□□□□□ -1.74
SMC3-202ENST00000462899 SLC51BQ86UW2 128 aa4.16□□□□□ -1.74
SMC3-202ENST00000462899 ORMDL3Q8N138 153 aa4.16□□□□□ -1.74
SMC3-202ENST00000462899 COX7B2Q8TF08 81 aa4.16□□□□□ -1.74
SMC3-202ENST00000462899 HIGD2AQ9BW72 106 aa4.16□□□□□ -1.74
SMC3-202ENST00000462899 VCX2Q9H322 139 aa4.16□□□□□ -1.74
SMC3-202ENST00000462899 CYSLTR1Q9Y271 337 aa4.16□□□□□ -1.74
SMC3-202ENST00000462899 SRP19P09132 144 aaKnown RBP4.15□□□□□ -1.75
SMC3-202ENST00000462899 CEBPGP53567 150 aa4.15□□□□□ -1.75
SMC3-202ENST00000462899 RPL23P62829 140 aaKnown RBP4.15□□□□□ -1.75
SMC3-202ENST00000462899 PRELID3AQ96N28 172 aa4.15□□□□□ -1.75
SMC3-202ENST00000462899 GEMIN7Q9H840 131 aaKnown RBP4.15□□□□□ -1.75
SMC3-202ENST00000462899 ZNF706Q9Y5V0 76 aaPredicted RBP4.15□□□□□ -1.75
SMC3-202ENST00000462899 F8W036 122 aa4.14□□□□□ -1.75
SMC3-202ENST00000462899 M0R2T5 61 aa4.14□□□□□ -1.75
SMC3-202ENST00000462899 SLC25A20O43772 301 aa4.14□□□□□ -1.75
SMC3-202ENST00000462899 RAB5BP61020 215 aa4.14□□□□□ -1.75
SMC3-202ENST00000462899 RGS21Q2M5E4 152 aa4.14□□□□□ -1.75
SMC3-202ENST00000462899 MRPL54Q6P161 138 aaKnown RBP4.14□□□□□ -1.75
SMC3-202ENST00000462899 TMEM136Q6ZRR5 245 aa4.14□□□□□ -1.75
SMC3-202ENST00000462899 Q8N8P6 123 aa4.14□□□□□ -1.75
SMC3-202ENST00000462899 TIMM17AQ99595 171 aa4.14□□□□□ -1.75
SMC3-202ENST00000462899 TINCRA0A1B0GVN0 87 aa4.13□□□□□ -1.75
SMC3-202ENST00000462899 KRTAP4-16G5E9R7 235 aaPredicted RBP4.13□□□□□ -1.75
SMC3-202ENST00000462899 SPRR1AP35321 89 aa4.13□□□□□ -1.75
SMC3-202ENST00000462899 Q8N9P0 234 aaPredicted RBP4.13□□□□□ -1.75
SMC3-202ENST00000462899 SND1-IT1Q9HBX3 110 aa4.13□□□□□ -1.75
SMC3-202ENST00000462899 BATF3Q9NR55 127 aa4.13□□□□□ -1.75
SMC3-202ENST00000462899 LAMTOR2Q9Y2Q5 125 aa4.13□□□□□ -1.75
SMC3-202ENST00000462899 K7EMI3 77 aa4.12□□□□□ -1.75
SMC3-202ENST00000462899 S100A8P05109 93 aa4.12□□□□□ -1.75
SMC3-202ENST00000462899 ORMDL2Q53FV1 153 aa4.12□□□□□ -1.75
SMC3-202ENST00000462899 SSBP3-AS1Q7Z2R9 100 aa4.12□□□□□ -1.75
SMC3-202ENST00000462899 SMCR5Q8TEV8 140 aa4.12□□□□□ -1.75
SMC3-202ENST00000462899 IGLV5-39A0A0G2JS06 123 aa4.11□□□□□ -1.75
SMC3-202ENST00000462899 LOC389332A0A1B0GUA5 103 aa4.11□□□□□ -1.75
SMC3-202ENST00000462899 SPINK8P0C7L1 97 aa4.11□□□□□ -1.75
SMC3-202ENST00000462899 RPL24P83731 157 aaKnown RBP4.11□□□□□ -1.75
SMC3-202ENST00000462899 MOBPQ13875 183 aa4.11□□□□□ -1.75
SMC3-202ENST00000462899 ATP5L2Q7Z4Y8 100 aa4.11□□□□□ -1.75
SMC3-202ENST00000462899 TOMM6Q96B49 74 aa4.11□□□□□ -1.75
SMC3-202ENST00000462899 MAP1LC3AQ9H492 121 aa4.11□□□□□ -1.75
SMC3-202ENST00000462899 ATP5LO75964 103 aa4.1□□□□□ -1.75
SMC3-202ENST00000462899 PFN2P35080 140 aa4.1□□□□□ -1.75
SMC3-202ENST00000462899 ADIRFQ15847 76 aa4.1□□□□□ -1.75
SMC3-202ENST00000462899 PAPPA-AS1Q5QFB9 102 aa4.1□□□□□ -1.75
SMC3-202ENST00000462899 ALKAL2Q6UX46 152 aa4.1□□□□□ -1.75
SMC3-202ENST00000462899 ERG28Q9UKR5 140 aa4.1□□□□□ -1.75
SMC3-202ENST00000462899 C9JQL5 133 aa4.09□□□□□ -1.75
SMC3-202ENST00000462899 RAB14P61106 215 aa4.09□□□□□ -1.75
SMC3-202ENST00000462899 COX17Q14061 63 aa4.09□□□□□ -1.75
SMC3-202ENST00000462899 TCTE3Q8IZS6 198 aa4.09□□□□□ -1.75
SMC3-202ENST00000462899 NAT8Q9UHE5 227 aa4.09□□□□□ -1.75
SMC3-202ENST00000462899 IGLV9-49A0A0B4J1Y8 123 aa4.08□□□□□ -1.76
SMC3-202ENST00000462899 ADCYAP1P18509 176 aa4.08□□□□□ -1.76
SMC3-202ENST00000462899 ERASQ7Z444 233 aa4.08□□□□□ -1.76
SMC3-202ENST00000462899 KCNQ1DNQ9H478 68 aa4.08□□□□□ -1.76
SMC3-202ENST00000462899 C9orf92A6NGG3 77 aa4.07□□□□□ -1.76
SMC3-202ENST00000462899 ERC2-IT1O76042 136 aa4.07□□□□□ -1.76
SMC3-202ENST00000462899 GAGE2AQ6NT46 116 aa4.07□□□□□ -1.76
SMC3-202ENST00000462899 AKAP14Q86UN6 197 aa4.07□□□□□ -1.76
SMC3-202ENST00000462899 CST9LQ9H4G1 147 aa4.07□□□□□ -1.76
SMC3-202ENST00000462899 NXT2Q9NPJ8 142 aaKnown RBP4.07□□□□□ -1.76
SMC3-202ENST00000462899 CFC1P0CG37 223 aa4.06□□□□□ -1.76
SMC3-202ENST00000462899 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
SMC3-202ENST00000462899 LINC01546A6NGU7 62 aa4.05□□□□□ -1.76
SMC3-202ENST00000462899 IGLC3P0DOY3 106 aa4.05□□□□□ -1.76
SMC3-202ENST00000462899 RPL37P61927 97 aaKnown RBP4.05□□□□□ -1.76
SMC3-202ENST00000462899 MPLKIPQ8TAP9 179 aa4.05□□□□□ -1.76
SMC3-202ENST00000462899 ZNF625Q96I27 306 aaPredicted RBP4.05□□□□□ -1.76
SMC3-202ENST00000462899 Q9BRP9 147 aa4.05□□□□□ -1.76
SMC3-202ENST00000462899 ZNF22P17026 224 aaPredicted RBP4.04□□□□□ -1.76
SMC3-202ENST00000462899 G0S2P27469 103 aa4.04□□□□□ -1.76
SMC3-202ENST00000462899 SCGB3A1Q96QR1 104 aa4.04□□□□□ -1.76
SMC3-202ENST00000462899 ETDCA0A1B0GVM5 59 aa4.03□□□□□ -1.76
SMC3-202ENST00000462899 H3BRM9 83 aa4.03□□□□□ -1.76
SMC3-202ENST00000462899 IGLV6-57P01721 117 aa4.03□□□□□ -1.76
SMC3-202ENST00000462899 PCP4P48539 62 aa4.03□□□□□ -1.76
SMC3-202ENST00000462899 PMVKQ15126 192 aa4.03□□□□□ -1.76
SMC3-202ENST00000462899 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
SMC3-202ENST00000462899 TRBV10-3A0A0K0K1G6 114 aa4.02□□□□□ -1.77
SMC3-202ENST00000462899 SFTA2Q6UW10 78 aa4.02□□□□□ -1.77
SMC3-202ENST00000462899 LINC01549A6NIU2 74 aa4.01□□□□□ -1.77
SMC3-202ENST00000462899 NCR3O14931 201 aa4.01□□□□□ -1.77
SMC3-202ENST00000462899 Q6ZRX8 168 aa4.01□□□□□ -1.77
SMC3-202ENST00000462899 A0A0A0MQY5 61 aa4□□□□□ -1.77
SMC3-202ENST00000462899 C9orf153Q5TBE3 101 aa4□□□□□ -1.77
SMC3-202ENST00000462899 LIMD2Q9BT23 127 aa4□□□□□ -1.77
SMC3-202ENST00000462899 TRAV9-1A0A075B6T8 112 aa3.99□□□□□ -1.77
SMC3-202ENST00000462899 A0A096LNJ9 63 aa3.99□□□□□ -1.77
SMC3-202ENST00000462899 MT2AP02795 61 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms