RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 H3BRM9 83 aa4.82□□□□□ -1.64
CDC42BPA-210ENST00000462553 BAGE3Q86Y29 109 aa4.82□□□□□ -1.64
CDC42BPA-210ENST00000462553 CHTOPQ9Y3Y2 248 aaKnown RBP4.82□□□□□ -1.64
CDC42BPA-210ENST00000462553 M0QXV9 152 aa4.81□□□□□ -1.64
CDC42BPA-210ENST00000462553 HSBP1O75506 76 aa4.81□□□□□ -1.64
CDC42BPA-210ENST00000462553 XAGE1AQ9HD64 81 aa4.81□□□□□ -1.64
CDC42BPA-210ENST00000462553 TMEM223A0PJW6 202 aa4.8□□□□□ -1.64
CDC42BPA-210ENST00000462553 TMEM170BQ5T4T1 132 aa4.8□□□□□ -1.64
CDC42BPA-210ENST00000462553 HIST1H2BKO60814 126 aa4.79□□□□□ -1.64
CDC42BPA-210ENST00000462553 LEPROTL1O95214 131 aa4.79□□□□□ -1.64
CDC42BPA-210ENST00000462553 HIST1H2BJP06899 126 aa4.79□□□□□ -1.64
CDC42BPA-210ENST00000462553 HIST1H2BOP23527 126 aa4.79□□□□□ -1.64
CDC42BPA-210ENST00000462553 HIST1H2BBP33778 126 aa4.79□□□□□ -1.64
CDC42BPA-210ENST00000462553 HIST1H2BDP58876 126 aa4.79□□□□□ -1.64
CDC42BPA-210ENST00000462553 HIST1H2BCP62807 126 aa4.79□□□□□ -1.64
CDC42BPA-210ENST00000462553 HIST2H2BEQ16778 126 aa4.79□□□□□ -1.64
CDC42BPA-210ENST00000462553 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-210ENST00000462553 HIST1H2BHQ93079 126 aa4.79□□□□□ -1.64
CDC42BPA-210ENST00000462553 ZNF625Q96I27 306 aaPredicted RBP4.79□□□□□ -1.64
CDC42BPA-210ENST00000462553 HIST1H2BNQ99877 126 aa4.79□□□□□ -1.64
CDC42BPA-210ENST00000462553 HIST1H2BMQ99879 126 aa4.79□□□□□ -1.64
CDC42BPA-210ENST00000462553 H3BS24 57 aa4.78□□□□□ -1.64
CDC42BPA-210ENST00000462553 C1orf137Q5JT78 98 aa4.78□□□□□ -1.64
CDC42BPA-210ENST00000462553 PRR26Q8N8Z3 221 aa4.78□□□□□ -1.64
CDC42BPA-210ENST00000462553 C22orf24Q9Y442 160 aa4.78□□□□□ -1.64
CDC42BPA-210ENST00000462553 IGLV5-37A0A075B6J1 123 aa4.77□□□□□ -1.65
CDC42BPA-210ENST00000462553 IGLV7-43P04211 117 aa4.77□□□□□ -1.65
CDC42BPA-210ENST00000462553 KRTAP1-4P0C5Y4 121 aa4.77□□□□□ -1.65
CDC42BPA-210ENST00000462553 TSPEAR-AS2P59090 65 aa4.77□□□□□ -1.65
CDC42BPA-210ENST00000462553 Q8NDZ9 215 aa4.77□□□□□ -1.65
CDC42BPA-210ENST00000462553 TP73-AS1Q9UF72 201 aa4.77□□□□□ -1.65
CDC42BPA-210ENST00000462553 ERG28Q9UKR5 140 aa4.77□□□□□ -1.65
CDC42BPA-210ENST00000462553 MUC17Q685J3 4493 aa4.77□□□□□ -1.65
CDC42BPA-210ENST00000462553 H0Y8G0 127 aa4.76□□□□□ -1.65
CDC42BPA-210ENST00000462553 FABP4P15090 132 aa4.76□□□□□ -1.65
CDC42BPA-210ENST00000462553 PFN2P35080 140 aa4.76□□□□□ -1.65
CDC42BPA-210ENST00000462553 UBE2BP63146 152 aa4.76□□□□□ -1.65
CDC42BPA-210ENST00000462553 PMCHL2Q9BQD1 86 aa4.76□□□□□ -1.65
CDC42BPA-210ENST00000462553 KRTAP9-8Q9BYQ0 159 aa4.76□□□□□ -1.65
CDC42BPA-210ENST00000462553 SND1-IT1Q9HBX3 110 aa4.76□□□□□ -1.65
CDC42BPA-210ENST00000462553 HSPB8Q9UJY1 196 aa4.76□□□□□ -1.65
CDC42BPA-210ENST00000462553 H0Y9J4 135 aa4.75□□□□□ -1.65
CDC42BPA-210ENST00000462553 VPREB1P12018 145 aa4.75□□□□□ -1.65
CDC42BPA-210ENST00000462553 COX17Q14061 63 aa4.75□□□□□ -1.65
CDC42BPA-210ENST00000462553 MRPL55Q7Z7F7 128 aaKnown RBP4.75□□□□□ -1.65
CDC42BPA-210ENST00000462553 LINC00167Q96N53 147 aa4.75□□□□□ -1.65
CDC42BPA-210ENST00000462553 COA6Q5JTJ3 125 aaKnown RBP4.74□□□□□ -1.65
CDC42BPA-210ENST00000462553 SFTA2Q6UW10 78 aa4.74□□□□□ -1.65
CDC42BPA-210ENST00000462553 DIRC1Q969H9 104 aa4.74□□□□□ -1.65
CDC42BPA-210ENST00000462553 GAGE10A6NGK3 116 aa4.73□□□□□ -1.65
CDC42BPA-210ENST00000462553 DPM2O94777 84 aa4.73□□□□□ -1.65
CDC42BPA-210ENST00000462553 PLNP26678 52 aa4.73□□□□□ -1.65
CDC42BPA-210ENST00000462553 LBHQ53QV2 105 aaPredicted RBP4.73□□□□□ -1.65
CDC42BPA-210ENST00000462553 IGLV1-50A0A075B6I6 118 aa4.72□□□□□ -1.65
CDC42BPA-210ENST00000462553 RPL37AP8A6NKH3 93 aa4.72□□□□□ -1.65
CDC42BPA-210ENST00000462553 SYS1-DBNDD2H3BUS1 97 aa4.72□□□□□ -1.65
CDC42BPA-210ENST00000462553 LEPROTO15243 131 aa4.72□□□□□ -1.65
CDC42BPA-210ENST00000462553 ATP6V1G1O75348 118 aa4.72□□□□□ -1.65
CDC42BPA-210ENST00000462553 IGKCP01834 107 aa4.72□□□□□ -1.65
CDC42BPA-210ENST00000462553 SMIM13P0DJ93 91 aa4.72□□□□□ -1.65
CDC42BPA-210ENST00000462553 KRTAP13-1Q8IUC0 172 aa4.72□□□□□ -1.65
CDC42BPA-210ENST00000462553 NKAPP1Q8N9T2 125 aa4.72□□□□□ -1.65
CDC42BPA-210ENST00000462553 MAP1LC3CQ9BXW4 147 aa4.72□□□□□ -1.65
CDC42BPA-210ENST00000462553 NDUFA12Q9UI09 145 aa4.72□□□□□ -1.65
CDC42BPA-210ENST00000462553 A0A0U1RRA0 63 aa4.71□□□□□ -1.66
CDC42BPA-210ENST00000462553 BCE1O60756 84 aa4.71□□□□□ -1.66
CDC42BPA-210ENST00000462553 HERV-K104P63124 156 aa4.71□□□□□ -1.66
CDC42BPA-210ENST00000462553 LINC01545Q5VT33 79 aa4.71□□□□□ -1.66
CDC42BPA-210ENST00000462553 PLEKHB2Q96CS7 222 aa4.71□□□□□ -1.66
CDC42BPA-210ENST00000462553 IGKV2-28A0A075B6P5 120 aa4.7□□□□□ -1.66
CDC42BPA-210ENST00000462553 MYMXA0A1B0GTQ4 84 aa4.7□□□□□ -1.66
CDC42BPA-210ENST00000462553 J3QQQ9 107 aa4.7□□□□□ -1.66
CDC42BPA-210ENST00000462553 ZNF861PO60384 105 aa4.7□□□□□ -1.66
CDC42BPA-210ENST00000462553 IGKV2D-28P01615 120 aa4.7□□□□□ -1.66
CDC42BPA-210ENST00000462553 C3orf79P0CE67 100 aa4.7□□□□□ -1.66
CDC42BPA-210ENST00000462553 LINC00158P58513 81 aa4.7□□□□□ -1.66
CDC42BPA-210ENST00000462553 MEIG1Q5JSS6 88 aa4.7□□□□□ -1.66
CDC42BPA-210ENST00000462553 MIR7-3HGQ8N6C7 128 aa4.7□□□□□ -1.66
CDC42BPA-210ENST00000462553 TMEM238C9JI98 176 aa4.69□□□□□ -1.66
CDC42BPA-210ENST00000462553 E9PLD3 99 aa4.69□□□□□ -1.66
CDC42BPA-210ENST00000462553 S100A1P23297 94 aa4.69□□□□□ -1.66
CDC42BPA-210ENST00000462553 HERVK_113P61574 105 aa4.69□□□□□ -1.66
CDC42BPA-210ENST00000462553 RPL24P83731 157 aaKnown RBP4.69□□□□□ -1.66
CDC42BPA-210ENST00000462553 PRR4Q16378 134 aa4.69□□□□□ -1.66
CDC42BPA-210ENST00000462553 PET117Q6UWS5 81 aa4.69□□□□□ -1.66
CDC42BPA-210ENST00000462553 LOC107984156A0A0G2JMH3 177 aa4.68□□□□□ -1.66
CDC42BPA-210ENST00000462553 M0R378 163 aa4.68□□□□□ -1.66
CDC42BPA-210ENST00000462553 NMUP48645 174 aa4.68□□□□□ -1.66
CDC42BPA-210ENST00000462553 ARL17AQ8IVW1 177 aa4.68□□□□□ -1.66
CDC42BPA-210ENST00000462553 DAND5Q8N907 189 aa4.68□□□□□ -1.66
CDC42BPA-210ENST00000462553 IGKV2D-26A0A0A0MRZ7 120 aa4.67□□□□□ -1.66
CDC42BPA-210ENST00000462553 LGALS3P17931 250 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-210ENST00000462553 RPL13AP40429 203 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-210ENST00000462553 RPL28P46779 137 aaKnown RBP4.67□□□□□ -1.66
CDC42BPA-210ENST00000462553 SOSTDC1Q6X4U4 206 aa4.67□□□□□ -1.66
CDC42BPA-210ENST00000462553 BOD1L2Q8IYS8 172 aa4.67□□□□□ -1.66
CDC42BPA-210ENST00000462553 TMEM126AQ9H061 195 aa4.67□□□□□ -1.66
CDC42BPA-210ENST00000462553 A0A0J9YXY3 114 aa4.66□□□□□ -1.66
CDC42BPA-210ENST00000462553 LINC00587B1AMM8 73 aa4.66□□□□□ -1.66
CDC42BPA-210ENST00000462553 NCR3O14931 201 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms