RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 SRSF9Q13242 221 aaKnown RBP eCLIP6.48□□□□□ -1.37
SYN3-206ENST00000461446 CEND1Q8N111 149 aa6.48□□□□□ -1.37
SYN3-206ENST00000461446 LINC00528Q8N1L1 170 aa6.48□□□□□ -1.37
SYN3-206ENST00000461446 CIRBP-AS1Q8TBR5 109 aa6.48□□□□□ -1.37
SYN3-206ENST00000461446 C6orf48Q9UBA6 75 aa6.48□□□□□ -1.37
SYN3-206ENST00000461446 PKIGQ9Y2B9 76 aa6.48□□□□□ -1.37
SYN3-206ENST00000461446 LOC107984640A0A0U1RRK4 108 aa6.47□□□□□ -1.37
SYN3-206ENST00000461446 A6NDN8 102 aa6.47□□□□□ -1.37
SYN3-206ENST00000461446 PANO1I0J062 215 aa6.47□□□□□ -1.37
SYN3-206ENST00000461446 TIMM17BO60830 172 aa6.47□□□□□ -1.37
SYN3-206ENST00000461446 CIRBPQ14011 172 aaKnown RBP6.47□□□□□ -1.37
SYN3-206ENST00000461446 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.47□□□□□ -1.37
SYN3-206ENST00000461446 TLX1NBP0CAT3 122 aa6.46□□□□□ -1.38
SYN3-206ENST00000461446 CHTF8P0CG12 524 aa6.46□□□□□ -1.38
SYN3-206ENST00000461446 PTTG1IPP53801 180 aa6.46□□□□□ -1.38
SYN3-206ENST00000461446 SFTA2Q6UW10 78 aa6.46□□□□□ -1.38
SYN3-206ENST00000461446 Q6ZVH6 145 aa6.46□□□□□ -1.38
SYN3-206ENST00000461446 ZNF625Q96I27 306 aaPredicted RBP6.46□□□□□ -1.38
SYN3-206ENST00000461446 A0A096LNI7 61 aa6.45□□□□□ -1.38
SYN3-206ENST00000461446 TMEM238LA0A1B0GVL6 79 aa6.45□□□□□ -1.38
SYN3-206ENST00000461446 A6NJY4 79 aa6.45□□□□□ -1.38
SYN3-206ENST00000461446 FXYD2P54710 66 aa6.45□□□□□ -1.38
SYN3-206ENST00000461446 GAGE2BQ13066 116 aa6.45□□□□□ -1.38
SYN3-206ENST00000461446 C9orf116Q5BN46 136 aaPredicted RBP6.45□□□□□ -1.38
SYN3-206ENST00000461446 SPACA4Q8TDM5 124 aa6.45□□□□□ -1.38
SYN3-206ENST00000461446 VPS13BQ7Z7G8 4022 aa6.45□□□□□ -1.38
SYN3-206ENST00000461446 SRRM2Q9UQ35 2752 aaKnown RBP6.45□□□□□ -1.38
SYN3-206ENST00000461446 IGKV2-24A0A0C4DH68 120 aa6.44□□□□□ -1.38
SYN3-206ENST00000461446 NDUFC2-KCTD14E9PQ53 114 aa6.44□□□□□ -1.38
SYN3-206ENST00000461446 PLA2G1BP04054 148 aaKnown RBP6.44□□□□□ -1.38
SYN3-206ENST00000461446 RPL18AQ02543 176 aaKnown RBP6.44□□□□□ -1.38
SYN3-206ENST00000461446 MEIG1Q5JSS6 88 aa6.44□□□□□ -1.38
SYN3-206ENST00000461446 Q6ZRP5 223 aa6.44□□□□□ -1.38
SYN3-206ENST00000461446 DPH3Q96FX2 82 aa6.44□□□□□ -1.38
SYN3-206ENST00000461446 SPANXDQ9BXN6 97 aa6.44□□□□□ -1.38
SYN3-206ENST00000461446 SPANXCQ9NY87 97 aa6.44□□□□□ -1.38
SYN3-206ENST00000461446 LINC00474Q9P2X8 69 aa6.44□□□□□ -1.38
SYN3-206ENST00000461446 A0A087WYN8 130 aa6.43□□□□□ -1.38
SYN3-206ENST00000461446 SMIM13P0DJ93 91 aa6.43□□□□□ -1.38
SYN3-206ENST00000461446 IFITM1P13164 125 aa6.43□□□□□ -1.38
SYN3-206ENST00000461446 LITAFQ99732 161 aa6.43□□□□□ -1.38
SYN3-206ENST00000461446 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
SYN3-206ENST00000461446 RPL24P83731 157 aaKnown RBP6.42□□□□□ -1.38
SYN3-206ENST00000461446 GAGE2EQ4V326 116 aa6.42□□□□□ -1.38
SYN3-206ENST00000461446 MUSTN1Q8IVN3 82 aa6.42□□□□□ -1.38
SYN3-206ENST00000461446 COPS9Q8WXC6 57 aa6.42□□□□□ -1.38
SYN3-206ENST00000461446 GAGE2DQ9UEU5 116 aa6.42□□□□□ -1.38
SYN3-206ENST00000461446 TAX1BP3O14907 124 aa6.41□□□□□ -1.38
SYN3-206ENST00000461446 ADAMTSL4-AS1Q5T5F5 129 aa6.41□□□□□ -1.38
SYN3-206ENST00000461446 NHP2Q9NX24 153 aaKnown RBP6.41□□□□□ -1.38
SYN3-206ENST00000461446 PLAC8Q9NZF1 115 aa6.41□□□□□ -1.38
SYN3-206ENST00000461446 DMBT1Q9UGM3 2413 aaPredicted RBP6.41□□□□□ -1.38
SYN3-206ENST00000461446 MYCBP2O75592 4640 aa6.4□□□□□ -1.38
SYN3-206ENST00000461446 A0A1B0GV90 55 aa6.4□□□□□ -1.38
SYN3-206ENST00000461446 A0A1B0GWB2 263 aa6.4□□□□□ -1.38
SYN3-206ENST00000461446 COX17Q14061 63 aa6.4□□□□□ -1.38
SYN3-206ENST00000461446 ERG28Q9UKR5 140 aa6.4□□□□□ -1.38
SYN3-206ENST00000461446 A0A0U1RRA0 63 aa6.39□□□□□ -1.39
SYN3-206ENST00000461446 A0A1W2PNN7 141 aa6.39□□□□□ -1.39
SYN3-206ENST00000461446 PFN2P35080 140 aa6.39□□□□□ -1.39
SYN3-206ENST00000461446 C9orf129Q5T035 196 aaKnown RBP6.39□□□□□ -1.39
SYN3-206ENST00000461446 PPDPFQ9H3Y8 114 aa6.39□□□□□ -1.39
SYN3-206ENST00000461446 A4D1N5 150 aa6.38□□□□□ -1.39
SYN3-206ENST00000461446 LINC00158P58513 81 aa6.38□□□□□ -1.39
SYN3-206ENST00000461446 LINC00308Q8TCZ7 52 aa6.38□□□□□ -1.39
SYN3-206ENST00000461446 RAB37Q96AX2 223 aa6.38□□□□□ -1.39
SYN3-206ENST00000461446 XAGE1AQ9HD64 81 aa6.38□□□□□ -1.39
SYN3-206ENST00000461446 HERC1Q15751 4861 aa6.37□□□□□ -1.39
SYN3-206ENST00000461446 FAM168BA1KXE4 195 aa6.37□□□□□ -1.39
SYN3-206ENST00000461446 C9orf118A6NHY6 69 aa6.37□□□□□ -1.39
SYN3-206ENST00000461446 CFC1BP0CG36 223 aa6.37□□□□□ -1.39
SYN3-206ENST00000461446 CFC1P0CG37 223 aa6.37□□□□□ -1.39
SYN3-206ENST00000461446 RPL37AP61513 92 aaKnown RBP6.37□□□□□ -1.39
SYN3-206ENST00000461446 NPC2P61916 151 aa6.37□□□□□ -1.39
SYN3-206ENST00000461446 MIR7-3HGQ8N6C7 128 aa6.37□□□□□ -1.39
SYN3-206ENST00000461446 DAND5Q8N907 189 aa6.37□□□□□ -1.39
SYN3-206ENST00000461446 A0A0B4J2C4 111 aa6.36□□□□□ -1.39
SYN3-206ENST00000461446 J3QL48 77 aa6.36□□□□□ -1.39
SYN3-206ENST00000461446 K7ERJ3 54 aa6.36□□□□□ -1.39
SYN3-206ENST00000461446 KRTAP7-1Q8IUC3 87 aa6.36□□□□□ -1.39
SYN3-206ENST00000461446 SND1-IT1Q9HBX3 110 aa6.36□□□□□ -1.39
SYN3-206ENST00000461446 PRO1854Q9UHT4 67 aa6.35□□□□□ -1.39
SYN3-206ENST00000461446 H3BUT2 72 aa6.34□□□□□ -1.39
SYN3-206ENST00000461446 SERTAD4-AS1Q5TG53 156 aa6.34□□□□□ -1.39
SYN3-206ENST00000461446 SOSTDC1Q6X4U4 206 aa6.34□□□□□ -1.39
SYN3-206ENST00000461446 FAM19A5Q7Z5A7 132 aaPredicted RBP6.34□□□□□ -1.39
SYN3-206ENST00000461446 PLA2G2DQ9UNK4 145 aa6.34□□□□□ -1.39
SYN3-206ENST00000461446 KRTAP29-1A8MX34 341 aaPredicted RBP6.33□□□□□ -1.4
SYN3-206ENST00000461446 EIF4EBP3O60516 100 aaPredicted RBP6.33□□□□□ -1.4
SYN3-206ENST00000461446 VAMP3Q15836 100 aa6.33□□□□□ -1.4
SYN3-206ENST00000461446 PHF5AQ7RTV0 110 aaKnown RBP6.33□□□□□ -1.4
SYN3-206ENST00000461446 C7orf33Q8WU49 177 aa6.33□□□□□ -1.4
SYN3-206ENST00000461446 LOC107984156A0A0G2JMH3 177 aa6.32□□□□□ -1.4
SYN3-206ENST00000461446 A0A1W2PPM0 123 aa6.32□□□□□ -1.4
SYN3-206ENST00000461446 M0QXV9 152 aa6.32□□□□□ -1.4
SYN3-206ENST00000461446 FABP2P12104 132 aa6.32□□□□□ -1.4
SYN3-206ENST00000461446 ARL17AQ8IVW1 177 aa6.32□□□□□ -1.4
SYN3-206ENST00000461446 C22orf24Q9Y442 160 aa6.32□□□□□ -1.4
SYN3-206ENST00000461446 IGLV5-37A0A075B6J1 123 aa6.31□□□□□ -1.4
SYN3-206ENST00000461446 TSPAN13O95857 204 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 251.8 ms