RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 XP32Q5T750 250 aa7.07□□□□□ -1.28
SSBP1-202ENST00000461433 SND1-IT1Q9HBX3 110 aa7.07□□□□□ -1.28
SSBP1-202ENST00000461433 A0A0J9YXY3 114 aa7.06□□□□□ -1.28
SSBP1-202ENST00000461433 LINC00158P58513 81 aa7.06□□□□□ -1.28
SSBP1-202ENST00000461433 MEIG1Q5JSS6 88 aa7.06□□□□□ -1.28
SSBP1-202ENST00000461433 SERTAD4-AS1Q5TG53 156 aa7.06□□□□□ -1.28
SSBP1-202ENST00000461433 Q8N1X5 172 aa7.06□□□□□ -1.28
SSBP1-202ENST00000461433 PCP2Q8IVA1 136 aa7.06□□□□□ -1.28
SSBP1-202ENST00000461433 ZNF815PA8K554 130 aa7.05□□□□□ -1.28
SSBP1-202ENST00000461433 LINC00587B1AMM8 73 aa7.05□□□□□ -1.28
SSBP1-202ENST00000461433 FAM19A5Q7Z5A7 132 aaPredicted RBP7.05□□□□□ -1.28
SSBP1-202ENST00000461433 LINC00528Q8N1L1 170 aa7.05□□□□□ -1.28
SSBP1-202ENST00000461433 MIR7-3HGQ8N6C7 128 aa7.05□□□□□ -1.28
SSBP1-202ENST00000461433 KRTAP9-2Q9BYQ4 174 aa7.05□□□□□ -1.28
SSBP1-202ENST00000461433 PLA2G2DQ9UNK4 145 aa7.05□□□□□ -1.28
SSBP1-202ENST00000461433 PYY3Q5JQD4 70 aa7.04□□□□□ -1.28
SSBP1-202ENST00000461433 ADAMTSL4-AS1Q5T5F5 129 aa7.04□□□□□ -1.28
SSBP1-202ENST00000461433 PHF5AQ7RTV0 110 aaKnown RBP7.04□□□□□ -1.28
SSBP1-202ENST00000461433 Q8NDZ9 215 aa7.04□□□□□ -1.28
SSBP1-202ENST00000461433 LITAFQ99732 161 aa7.04□□□□□ -1.28
SSBP1-202ENST00000461433 KRTAP4-5Q9BYR2 181 aa7.04□□□□□ -1.28
SSBP1-202ENST00000461433 DAND5Q8N907 189 aa7.03□□□□□ -1.28
SSBP1-202ENST00000461433 KRTAP9-6A0A140TA67 174 aa7.03□□□□□ -1.28
SSBP1-202ENST00000461433 HSBP1L1C9JCN9 74 aa7.03□□□□□ -1.28
SSBP1-202ENST00000461433 KRTAP10-4P60372 401 aaPredicted RBP7.03□□□□□ -1.28
SSBP1-202ENST00000461433 Q5VSD8 79 aa7.03□□□□□ -1.28
SSBP1-202ENST00000461433 FAT1Q14517 4588 aa7.02□□□□□ -1.29
SSBP1-202ENST00000461433 IGLV5-37A0A075B6J1 123 aa7.02□□□□□ -1.29
SSBP1-202ENST00000461433 LOC107984156A0A0G2JMH3 177 aa7.02□□□□□ -1.29
SSBP1-202ENST00000461433 VPREB1P12018 145 aa7.02□□□□□ -1.29
SSBP1-202ENST00000461433 KRTAP11-1Q8IUC1 163 aa7.02□□□□□ -1.29
SSBP1-202ENST00000461433 ARL17AQ8IVW1 177 aa7.02□□□□□ -1.29
SSBP1-202ENST00000461433 C22orf24Q9Y442 160 aa7.02□□□□□ -1.29
SSBP1-202ENST00000461433 M0QXV9 152 aa7.01□□□□□ -1.29
SSBP1-202ENST00000461433 EIF4EBP3O60516 100 aaPredicted RBP7.01□□□□□ -1.29
SSBP1-202ENST00000461433 TIMM17BO60830 172 aa7.01□□□□□ -1.29
SSBP1-202ENST00000461433 LCE2CQ5TA81 110 aa7.01□□□□□ -1.29
SSBP1-202ENST00000461433 VPS13BQ7Z7G8 4022 aa7□□□□□ -1.29
SSBP1-202ENST00000461433 FAM229AH3BQW9 127 aa7□□□□□ -1.29
SSBP1-202ENST00000461433 SOSTDC1Q6X4U4 206 aa7□□□□□ -1.29
SSBP1-202ENST00000461433 TP73-AS1Q9UF72 201 aa7□□□□□ -1.29
SSBP1-202ENST00000461433 PCLOQ9Y6V0 5065 aa7□□□□□ -1.29
SSBP1-202ENST00000461433 C7orf33Q8WU49 177 aa7□□□□□ -1.29
SSBP1-202ENST00000461433 MRPL55Q7Z7F7 128 aaKnown RBP6.99□□□□□ -1.29
SSBP1-202ENST00000461433 BOD1L2Q8IYS8 172 aa6.99□□□□□ -1.29
SSBP1-202ENST00000461433 PAM16Q9Y3D7 125 aa6.99□□□□□ -1.29
SSBP1-202ENST00000461433 COX8AP10176 69 aa6.98□□□□□ -1.29
SSBP1-202ENST00000461433 RPL37AP61513 92 aaKnown RBP6.98□□□□□ -1.29
SSBP1-202ENST00000461433 PRR3P79522 188 aaKnown RBP6.98□□□□□ -1.29
SSBP1-202ENST00000461433 RPL24P83731 157 aaKnown RBP6.98□□□□□ -1.29
SSBP1-202ENST00000461433 SPATA45Q537H7 98 aa6.98□□□□□ -1.29
SSBP1-202ENST00000461433 SCGB1D4Q6XE38 83 aa6.98□□□□□ -1.29
SSBP1-202ENST00000461433 LINC00167Q96N53 147 aa6.98□□□□□ -1.29
SSBP1-202ENST00000461433 VAMP8Q9BV40 100 aa6.98□□□□□ -1.29
SSBP1-202ENST00000461433 PLA2G1BP04054 148 aaKnown RBP6.97□□□□□ -1.29
SSBP1-202ENST00000461433 NPC2P61916 151 aa6.97□□□□□ -1.29
SSBP1-202ENST00000461433 LINC00308Q8TCZ7 52 aa6.97□□□□□ -1.29
SSBP1-202ENST00000461433 PSORS1C2Q9UIG4 136 aa6.97□□□□□ -1.29
SSBP1-202ENST00000461433 SRRM2Q9UQ35 2752 aaKnown RBP6.97□□□□□ -1.29
SSBP1-202ENST00000461433 LBHQ53QV2 105 aaPredicted RBP6.96□□□□□ -1.29
SSBP1-202ENST00000461433 NKAPP1Q8N9T2 125 aa6.96□□□□□ -1.29
SSBP1-202ENST00000461433 SPANXDQ9BXN6 97 aa6.96□□□□□ -1.29
SSBP1-202ENST00000461433 SPANXCQ9NY87 97 aa6.96□□□□□ -1.29
SSBP1-202ENST00000461433 GAGE10A6NGK3 116 aa6.96□□□□□ -1.3
SSBP1-202ENST00000461433 RPL37AP8A6NKH3 93 aa6.96□□□□□ -1.3
SSBP1-202ENST00000461433 DLEU1O43261 78 aa6.96□□□□□ -1.3
SSBP1-202ENST00000461433 C14orf144Q96I85 54 aa6.96□□□□□ -1.3
SSBP1-202ENST00000461433 TMEM238C9JI98 176 aa6.95□□□□□ -1.3
SSBP1-202ENST00000461433 HNRNPA3P51991 378 aaKnown RBP6.95□□□□□ -1.3
SSBP1-202ENST00000461433 UBE2BP63146 152 aa6.95□□□□□ -1.3
SSBP1-202ENST00000461433 IGLV1-50A0A075B6I6 118 aa6.94□□□□□ -1.3
SSBP1-202ENST00000461433 NDUFC2O95298 119 aa6.94□□□□□ -1.3
SSBP1-202ENST00000461433 MIEN1Q9BRT3 115 aa6.94□□□□□ -1.3
SSBP1-202ENST00000461433 M0R378 163 aa6.93□□□□□ -1.3
SSBP1-202ENST00000461433 NCR3O14931 201 aa6.93□□□□□ -1.3
SSBP1-202ENST00000461433 SPANXB1Q9NS25 103 aaPredicted RBP6.93□□□□□ -1.3
SSBP1-202ENST00000461433 ABCA13Q86UQ4 5058 aa6.93□□□□□ -1.3
SSBP1-202ENST00000461433 Q6ZVH6 145 aa6.93□□□□□ -1.3
SSBP1-202ENST00000461433 PPDPFQ9H3Y8 114 aa6.93□□□□□ -1.3
SSBP1-202ENST00000461433 IGKV2-28A0A075B6P5 120 aa6.92□□□□□ -1.3
SSBP1-202ENST00000461433 IGKV2D-28P01615 120 aa6.92□□□□□ -1.3
SSBP1-202ENST00000461433 IFITM1P13164 125 aa6.92□□□□□ -1.3
SSBP1-202ENST00000461433 C1orf137Q5JT78 98 aa6.92□□□□□ -1.3
SSBP1-202ENST00000461433 MUSTN1Q8IVN3 82 aa6.92□□□□□ -1.3
SSBP1-202ENST00000461433 TRBV10-2A0A0K0K1G8 114 aa6.91□□□□□ -1.3
SSBP1-202ENST00000461433 SLC25A34Q6PIV7 304 aa6.91□□□□□ -1.3
SSBP1-202ENST00000461433 C2orf91Q6ZV80 131 aa6.91□□□□□ -1.3
SSBP1-202ENST00000461433 LORP23490 312 aaPredicted RBP6.9□□□□□ -1.3
SSBP1-202ENST00000461433 SRSF9Q13242 221 aaKnown RBP eCLIP6.9□□□□□ -1.3
SSBP1-202ENST00000461433 TRBV10-3A0A0K0K1G6 114 aa6.9□□□□□ -1.31
SSBP1-202ENST00000461433 TSTD3H0UI37 97 aa6.9□□□□□ -1.31
SSBP1-202ENST00000461433 IGLV7-43P04211 117 aa6.9□□□□□ -1.31
SSBP1-202ENST00000461433 HIGD1BQ9P298 99 aa6.9□□□□□ -1.31
SSBP1-202ENST00000461433 PKHD1L1Q86WI1 4243 aa6.9□□□□□ -1.31
SSBP1-202ENST00000461433 IGLV6-57P01721 117 aa6.89□□□□□ -1.31
SSBP1-202ENST00000461433 INAFM2P0DMQ5 153 aa6.89□□□□□ -1.31
SSBP1-202ENST00000461433 COPS9Q8WXC6 57 aa6.88□□□□□ -1.31
SSBP1-202ENST00000461433 TMEM126AQ9H061 195 aa6.88□□□□□ -1.31
SSBP1-202ENST00000461433 KCNQ1DNQ9H478 68 aa6.88□□□□□ -1.31
SSBP1-202ENST00000461433 BCE1O60756 84 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 125.1 ms