RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 LBHQ53QV2 105 aaPredicted RBP10.1□□□□□ -0.79
SHANK1-205ENST00000461154 TP73-AS1Q9UF72 201 aa10.1□□□□□ -0.79
SHANK1-205ENST00000461154 C22orf24Q9Y442 160 aa10.1□□□□□ -0.79
SHANK1-205ENST00000461154 SMIM13P0DJ93 91 aa10.09□□□□□ -0.79
SHANK1-205ENST00000461154 UBE2BP63146 152 aa10.09□□□□□ -0.79
SHANK1-205ENST00000461154 A0A0U1RRA0 63 aa10.08□□□□□ -0.8
SHANK1-205ENST00000461154 C5orf52A6NGY3 159 aa10.07□□□□□ -0.8
SHANK1-205ENST00000461154 KRTAP29-1A8MX34 341 aaPredicted RBP10.07□□□□□ -0.8
SHANK1-205ENST00000461154 J3QL48 77 aa10.07□□□□□ -0.8
SHANK1-205ENST00000461154 MRPL55Q7Z7F7 128 aaKnown RBP10.07□□□□□ -0.8
SHANK1-205ENST00000461154 NKAPP1Q8N9T2 125 aa10.07□□□□□ -0.8
SHANK1-205ENST00000461154 PSORS1C2Q9UIG4 136 aa10.07□□□□□ -0.8
SHANK1-205ENST00000461154 IGLV5-37A0A075B6J1 123 aa10.06□□□□□ -0.8
SHANK1-205ENST00000461154 RPL24P83731 157 aaKnown RBP10.06□□□□□ -0.8
SHANK1-205ENST00000461154 OXTP01178 125 aa10.05□□□□□ -0.8
SHANK1-205ENST00000461154 HNRNPA3P51991 378 aaKnown RBP10.05□□□□□ -0.8
SHANK1-205ENST00000461154 MIR7-3HGQ8N6C7 128 aa10.05□□□□□ -0.8
SHANK1-205ENST00000461154 C1orf137Q5JT78 98 aa10.04□□□□□ -0.8
SHANK1-205ENST00000461154 ATOH7Q8N100 152 aa10.03□□□□□ -0.8
SHANK1-205ENST00000461154 DMBT1Q9UGM3 2413 aaPredicted RBP10.02□□□□□ -0.81
SHANK1-205ENST00000461154 A0A0J9YXY3 114 aa10.02□□□□□ -0.81
SHANK1-205ENST00000461154 VPREB1P12018 145 aa10.02□□□□□ -0.81
SHANK1-205ENST00000461154 IGKV2D-26A0A0A0MRZ7 120 aa10.01□□□□□ -0.81
SHANK1-205ENST00000461154 ZNF815PA8K554 130 aa10.01□□□□□ -0.81
SHANK1-205ENST00000461154 KRTAP11-1Q8IUC1 163 aa10.01□□□□□ -0.81
SHANK1-205ENST00000461154 LINC00167Q96N53 147 aa10.01□□□□□ -0.81
SHANK1-205ENST00000461154 SPINK6Q6UWN8 80 aa10□□□□□ -0.81
SHANK1-205ENST00000461154 BOD1L2Q8IYS8 172 aa10□□□□□ -0.81
SHANK1-205ENST00000461154 MIEN1Q9BRT3 115 aa10□□□□□ -0.81
SHANK1-205ENST00000461154 GAGE10A6NGK3 116 aa9.99□□□□□ -0.81
SHANK1-205ENST00000461154 HSBP1L1C9JCN9 74 aa9.99□□□□□ -0.81
SHANK1-205ENST00000461154 ANKRD39Q53RE8 183 aa9.99□□□□□ -0.81
SHANK1-205ENST00000461154 RPL37AP8A6NKH3 93 aa9.98□□□□□ -0.81
SHANK1-205ENST00000461154 IGLV7-43P04211 117 aa9.98□□□□□ -0.81
SHANK1-205ENST00000461154 DAND5Q8N907 189 aa9.98□□□□□ -0.81
SHANK1-205ENST00000461154 PKHD1L1Q86WI1 4243 aa9.98□□□□□ -0.81
SHANK1-205ENST00000461154 LOC107984156A0A0G2JMH3 177 aa9.97□□□□□ -0.81
SHANK1-205ENST00000461154 TIMM17BO60830 172 aa9.97□□□□□ -0.81
SHANK1-205ENST00000461154 SCGB1D1O95968 90 aa9.97□□□□□ -0.81
SHANK1-205ENST00000461154 SRSF9Q13242 221 aaKnown RBP eCLIP9.97□□□□□ -0.81
SHANK1-205ENST00000461154 ARL17AQ8IVW1 177 aa9.97□□□□□ -0.81
SHANK1-205ENST00000461154 M0R378 163 aa9.96□□□□□ -0.82
SHANK1-205ENST00000461154 Q8NDZ9 215 aa9.96□□□□□ -0.82
SHANK1-205ENST00000461154 TTTY13Q9BZ97 58 aa9.96□□□□□ -0.82
SHANK1-205ENST00000461154 SCGB1D4Q6XE38 83 aa9.95□□□□□ -0.82
SHANK1-205ENST00000461154 MYCBP2O75592 4640 aa9.94□□□□□ -0.82
SHANK1-205ENST00000461154 IGLV1-50A0A075B6I6 118 aa9.94□□□□□ -0.82
SHANK1-205ENST00000461154 IGKV2-28A0A075B6P5 120 aa9.94□□□□□ -0.82
SHANK1-205ENST00000461154 BCE1O60756 84 aa9.94□□□□□ -0.82
SHANK1-205ENST00000461154 IGKV2D-28P01615 120 aa9.94□□□□□ -0.82
SHANK1-205ENST00000461154 ADAMTSL4-AS1Q5T5F5 129 aa9.94□□□□□ -0.82
SHANK1-205ENST00000461154 REG3GQ6UW15 175 aa9.93□□□□□ -0.82
SHANK1-205ENST00000461154 DIRC1Q969H9 104 aa9.93□□□□□ -0.82
SHANK1-205ENST00000461154 TMEM238C9JI98 176 aa9.92□□□□□ -0.82
SHANK1-205ENST00000461154 NCR3O14931 201 aa9.92□□□□□ -0.82
SHANK1-205ENST00000461154 NDUFC2O95298 119 aa9.92□□□□□ -0.82
SHANK1-205ENST00000461154 PCP2Q8IVA1 136 aa9.92□□□□□ -0.82
SHANK1-205ENST00000461154 LITAFQ99732 161 aa9.92□□□□□ -0.82
SHANK1-205ENST00000461154 TMA7Q9Y2S6 64 aaKnown RBP9.92□□□□□ -0.82
SHANK1-205ENST00000461154 TRBV10-2A0A0K0K1G8 114 aa9.91□□□□□ -0.82
SHANK1-205ENST00000461154 NPC2P61916 151 aa9.91□□□□□ -0.82
SHANK1-205ENST00000461154 SPANXB1Q9NS25 103 aaPredicted RBP9.91□□□□□ -0.82
SHANK1-205ENST00000461154 ZNF861PO60384 105 aa9.9□□□□□ -0.82
SHANK1-205ENST00000461154 S100A12P80511 92 aa9.9□□□□□ -0.82
SHANK1-205ENST00000461154 HERC1Q15751 4861 aa9.89□□□□□ -0.83
SHANK1-205ENST00000461154 RPL28P46779 137 aaKnown RBP9.89□□□□□ -0.83
SHANK1-205ENST00000461154 SOSTDC1Q6X4U4 206 aa9.89□□□□□ -0.83
SHANK1-205ENST00000461154 LINC00308Q8TCZ7 52 aa9.89□□□□□ -0.83
SHANK1-205ENST00000461154 COPS9Q8WXC6 57 aa9.89□□□□□ -0.83
SHANK1-205ENST00000461154 TMEM126AQ9H061 195 aa9.89□□□□□ -0.83
SHANK1-205ENST00000461154 H0Y9J4 135 aa9.88□□□□□ -0.83
SHANK1-205ENST00000461154 UBE2AP49459 152 aa9.88□□□□□ -0.83
SHANK1-205ENST00000461154 SPANXDQ9BXN6 97 aa9.88□□□□□ -0.83
SHANK1-205ENST00000461154 SPANXCQ9NY87 97 aa9.88□□□□□ -0.83
SHANK1-205ENST00000461154 PRYO14603 147 aa9.87□□□□□ -0.83
SHANK1-205ENST00000461154 Q6ZVH6 145 aa9.87□□□□□ -0.83
SHANK1-205ENST00000461154 JOSD1Q15040 202 aaPredicted RBP9.86□□□□□ -0.83
SHANK1-205ENST00000461154 S100A7L2Q5SY68 101 aa9.86□□□□□ -0.83
SHANK1-205ENST00000461154 TRBV10-3A0A0K0K1G6 114 aa9.85□□□□□ -0.83
SHANK1-205ENST00000461154 EIF4EBP3O60516 100 aaPredicted RBP9.85□□□□□ -0.83
SHANK1-205ENST00000461154 IFITM1P13164 125 aa9.85□□□□□ -0.83
SHANK1-205ENST00000461154 DDTP30046 118 aa9.85□□□□□ -0.83
SHANK1-205ENST00000461154 FAM19A1Q7Z5A9 133 aa9.85□□□□□ -0.83
SHANK1-205ENST00000461154 LINC01600Q96MT4 127 aa9.85□□□□□ -0.83
SHANK1-205ENST00000461154 KCNQ1DNQ9H478 68 aa9.85□□□□□ -0.83
SHANK1-205ENST00000461154 MT1HL1P0DM35 61 aa9.84□□□□□ -0.83
SHANK1-205ENST00000461154 PPDPFQ9H3Y8 114 aa9.84□□□□□ -0.83
SHANK1-205ENST00000461154 CBY1Q9Y3M2 126 aa9.83□□□□□ -0.84
SHANK1-205ENST00000461154 FAT3Q8TDW7 4589 aa9.83□□□□□ -0.84
SHANK1-205ENST00000461154 KRTAP13-1Q8IUC0 172 aa9.82□□□□□ -0.84
SHANK1-205ENST00000461154 VAMP8Q9BV40 100 aa9.82□□□□□ -0.84
SHANK1-205ENST00000461154 LRP1Q07954 4544 aaKnown RBP9.82□□□□□ -0.84
SHANK1-205ENST00000461154 IGLV6-57P01721 117 aa9.81□□□□□ -0.84
SHANK1-205ENST00000461154 COX8AP10176 69 aa9.81□□□□□ -0.84
SHANK1-205ENST00000461154 PRLHP81277 87 aa9.81□□□□□ -0.84
SHANK1-205ENST00000461154 LINC00518Q8N0U6 118 aa9.81□□□□□ -0.84
SHANK1-205ENST00000461154 LINC00337Q8N6G1 96 aa9.81□□□□□ -0.84
SHANK1-205ENST00000461154 PAM16Q9Y3D7 125 aa9.81□□□□□ -0.84
SHANK1-205ENST00000461154 ETDCA0A1B0GVM5 59 aa9.8□□□□□ -0.84
SHANK1-205ENST00000461154 SPRR1AP35321 89 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms