RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 J3QQQ9 107 aa5.88□□□□□ -1.47
COL6A2-207ENST00000460886 TSPEAR-AS2P59090 65 aa5.88□□□□□ -1.47
COL6A2-207ENST00000460886 COX17Q14061 63 aa5.88□□□□□ -1.47
COL6A2-207ENST00000460886 KRTAP7-1Q8IUC3 87 aa5.88□□□□□ -1.47
COL6A2-207ENST00000460886 A0A0U1RRA0 63 aa5.87□□□□□ -1.47
COL6A2-207ENST00000460886 MYMXA0A1B0GTQ4 84 aa5.87□□□□□ -1.47
COL6A2-207ENST00000460886 C20orf202A1L168 122 aa5.87□□□□□ -1.47
COL6A2-207ENST00000460886 M0QXV9 152 aa5.87□□□□□ -1.47
COL6A2-207ENST00000460886 LGALS3P17931 250 aaKnown RBP5.87□□□□□ -1.47
COL6A2-207ENST00000460886 LINC00158P58513 81 aa5.87□□□□□ -1.47
COL6A2-207ENST00000460886 SNRPEP62304 92 aaKnown RBP5.87□□□□□ -1.47
COL6A2-207ENST00000460886 HERV-K104P63124 156 aa5.87□□□□□ -1.47
COL6A2-207ENST00000460886 HIST1H2BLQ99880 126 aa5.87□□□□□ -1.47
COL6A2-207ENST00000460886 E9PLD3 99 aa5.86□□□□□ -1.47
COL6A2-207ENST00000460886 MEIG1Q5JSS6 88 aa5.86□□□□□ -1.47
COL6A2-207ENST00000460886 LINC01600Q96MT4 127 aa5.86□□□□□ -1.47
COL6A2-207ENST00000460886 SND1-IT1Q9HBX3 110 aa5.86□□□□□ -1.47
COL6A2-207ENST00000460886 SMIM13P0DJ93 91 aa5.85□□□□□ -1.47
COL6A2-207ENST00000460886 PRR3P79522 188 aaKnown RBP5.85□□□□□ -1.47
COL6A2-207ENST00000460886 C22orf24Q9Y442 160 aa5.85□□□□□ -1.47
COL6A2-207ENST00000460886 C5orf52A6NGY3 159 aa5.84□□□□□ -1.47
COL6A2-207ENST00000460886 LINC00587B1AMM8 73 aa5.84□□□□□ -1.47
COL6A2-207ENST00000460886 NMUP48645 174 aa5.84□□□□□ -1.47
COL6A2-207ENST00000460886 UBE2BP63146 152 aa5.84□□□□□ -1.47
COL6A2-207ENST00000460886 ATOH7Q8N100 152 aa5.84□□□□□ -1.47
COL6A2-207ENST00000460886 MRPL55Q7Z7F7 128 aaKnown RBP5.83□□□□□ -1.48
COL6A2-207ENST00000460886 KRTAP11-1Q8IUC1 163 aa5.83□□□□□ -1.48
COL6A2-207ENST00000460886 MIR7-3HGQ8N6C7 128 aa5.83□□□□□ -1.48
COL6A2-207ENST00000460886 PSORS1C2Q9UIG4 136 aa5.83□□□□□ -1.48
COL6A2-207ENST00000460886 IGKV2D-26A0A0A0MRZ7 120 aa5.82□□□□□ -1.48
COL6A2-207ENST00000460886 AKR1D1P51857 326 aa5.82□□□□□ -1.48
COL6A2-207ENST00000460886 LBHQ53QV2 105 aaPredicted RBP5.82□□□□□ -1.48
COL6A2-207ENST00000460886 C1orf137Q5JT78 98 aa5.82□□□□□ -1.48
COL6A2-207ENST00000460886 NKAPP1Q8N9T2 125 aa5.82□□□□□ -1.48
COL6A2-207ENST00000460886 TP73-AS1Q9UF72 201 aa5.82□□□□□ -1.48
COL6A2-207ENST00000460886 IGLV5-37A0A075B6J1 123 aa5.81□□□□□ -1.48
COL6A2-207ENST00000460886 GAGE10A6NGK3 116 aa5.81□□□□□ -1.48
COL6A2-207ENST00000460886 VPREB1P12018 145 aa5.81□□□□□ -1.48
COL6A2-207ENST00000460886 KRTAP10-8P60410 259 aa5.81□□□□□ -1.48
COL6A2-207ENST00000460886 RPL24P83731 157 aaKnown RBP5.81□□□□□ -1.48
COL6A2-207ENST00000460886 ANKRD39Q53RE8 183 aa5.81□□□□□ -1.48
COL6A2-207ENST00000460886 DAND5Q8N907 189 aa5.81□□□□□ -1.48
COL6A2-207ENST00000460886 LINC00167Q96N53 147 aa5.81□□□□□ -1.48
COL6A2-207ENST00000460886 TTTY13Q9BZ97 58 aa5.81□□□□□ -1.48
COL6A2-207ENST00000460886 A0A0J9YXY3 114 aa5.8□□□□□ -1.48
COL6A2-207ENST00000460886 RPL37AP8A6NKH3 93 aa5.8□□□□□ -1.48
COL6A2-207ENST00000460886 ZNF815PA8K554 130 aa5.8□□□□□ -1.48
COL6A2-207ENST00000460886 SRSF9Q13242 221 aaKnown RBP eCLIP5.8□□□□□ -1.48
COL6A2-207ENST00000460886 SPINK6Q6UWN8 80 aa5.8□□□□□ -1.48
COL6A2-207ENST00000460886 Q8NDZ9 215 aa5.8□□□□□ -1.48
COL6A2-207ENST00000460886 SCGB1D1O95968 90 aa5.79□□□□□ -1.48
COL6A2-207ENST00000460886 BOD1L2Q8IYS8 172 aa5.79□□□□□ -1.48
COL6A2-207ENST00000460886 TMA7Q9Y2S6 64 aaKnown RBP5.79□□□□□ -1.48
COL6A2-207ENST00000460886 IGLV7-43P04211 117 aa5.78□□□□□ -1.48
COL6A2-207ENST00000460886 ADAMTSL4-AS1Q5T5F5 129 aa5.78□□□□□ -1.48
COL6A2-207ENST00000460886 IGKV2-28A0A075B6P5 120 aa5.77□□□□□ -1.49
COL6A2-207ENST00000460886 HSBP1L1C9JCN9 74 aa5.77□□□□□ -1.49
COL6A2-207ENST00000460886 IGKV2D-28P01615 120 aa5.77□□□□□ -1.49
COL6A2-207ENST00000460886 NPC2P61916 151 aa5.77□□□□□ -1.49
COL6A2-207ENST00000460886 REG3GQ6UW15 175 aa5.77□□□□□ -1.49
COL6A2-207ENST00000460886 PCP2Q8IVA1 136 aa5.77□□□□□ -1.49
COL6A2-207ENST00000460886 MIEN1Q9BRT3 115 aa5.77□□□□□ -1.49
COL6A2-207ENST00000460886 IGLV1-50A0A075B6I6 118 aa5.76□□□□□ -1.49
COL6A2-207ENST00000460886 LOC107984156A0A0G2JMH3 177 aa5.76□□□□□ -1.49
COL6A2-207ENST00000460886 M0R378 163 aa5.76□□□□□ -1.49
COL6A2-207ENST00000460886 NCR3O14931 201 aa5.76□□□□□ -1.49
COL6A2-207ENST00000460886 TIMM17BO60830 172 aa5.76□□□□□ -1.49
COL6A2-207ENST00000460886 SCGB1D4Q6XE38 83 aa5.76□□□□□ -1.49
COL6A2-207ENST00000460886 ARL17AQ8IVW1 177 aa5.76□□□□□ -1.49
COL6A2-207ENST00000460886 LITAFQ99732 161 aa5.76□□□□□ -1.49
COL6A2-207ENST00000460886 EIF4EBP3O60516 100 aaPredicted RBP5.75□□□□□ -1.49
COL6A2-207ENST00000460886 SOSTDC1Q6X4U4 206 aa5.75□□□□□ -1.49
COL6A2-207ENST00000460886 BCE1O60756 84 aa5.74□□□□□ -1.49
COL6A2-207ENST00000460886 TMEM238C9JI98 176 aa5.73□□□□□ -1.49
COL6A2-207ENST00000460886 LINC00308Q8TCZ7 52 aa5.73□□□□□ -1.49
COL6A2-207ENST00000460886 DIRC1Q969H9 104 aa5.73□□□□□ -1.49
COL6A2-207ENST00000460886 TRBV10-3A0A0K0K1G6 114 aa5.72□□□□□ -1.49
COL6A2-207ENST00000460886 TRBV10-2A0A0K0K1G8 114 aa5.72□□□□□ -1.49
COL6A2-207ENST00000460886 ZNF861PO60384 105 aa5.72□□□□□ -1.49
COL6A2-207ENST00000460886 NDUFC2O95298 119 aa5.72□□□□□ -1.49
COL6A2-207ENST00000460886 UBE2AP49459 152 aa5.72□□□□□ -1.49
COL6A2-207ENST00000460886 JOSD1Q15040 202 aaPredicted RBP5.72□□□□□ -1.49
COL6A2-207ENST00000460886 TMEM126AQ9H061 195 aa5.72□□□□□ -1.49
COL6A2-207ENST00000460886 SPANXB1Q9NS25 103 aaPredicted RBP5.72□□□□□ -1.49
COL6A2-207ENST00000460886 H0Y9J4 135 aa5.71□□□□□ -1.5
COL6A2-207ENST00000460886 RPL28P46779 137 aaKnown RBP5.71□□□□□ -1.5
COL6A2-207ENST00000460886 FAM19A1Q7Z5A9 133 aa5.71□□□□□ -1.5
COL6A2-207ENST00000460886 SPANXDQ9BXN6 97 aa5.71□□□□□ -1.5
COL6A2-207ENST00000460886 SPANXCQ9NY87 97 aa5.71□□□□□ -1.5
COL6A2-207ENST00000460886 LPAP08519 4548 aa5.7□□□□□ -1.5
COL6A2-207ENST00000460886 PRYO14603 147 aa5.7□□□□□ -1.5
COL6A2-207ENST00000460886 DDTP30046 118 aa5.7□□□□□ -1.5
COL6A2-207ENST00000460886 PRLHP81277 87 aa5.7□□□□□ -1.5
COL6A2-207ENST00000460886 S100A7L2Q5SY68 101 aa5.7□□□□□ -1.5
COL6A2-207ENST00000460886 PAM16Q9Y3D7 125 aa5.7□□□□□ -1.5
COL6A2-207ENST00000460886 S100A12P80511 92 aa5.69□□□□□ -1.5
COL6A2-207ENST00000460886 SPATA45Q537H7 98 aa5.69□□□□□ -1.5
COL6A2-207ENST00000460886 Q6ZVH6 145 aa5.69□□□□□ -1.5
COL6A2-207ENST00000460886 VAMP8Q9BV40 100 aa5.69□□□□□ -1.5
COL6A2-207ENST00000460886 KCNQ1DNQ9H478 68 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms