RNA–Protein interactions for RNA: ENST00000460791.1

NXF3-203, Transcript of nuclear RNA export factor 3, humanhuman

TSL 2

Gene NXF3, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-203ENST00000460791 CXCL5P42830 114 aa3.69□□□□□ -1.82
NXF3-203ENST00000460791 RPL37AP61513 92 aaKnown RBP3.69□□□□□ -1.82
NXF3-203ENST00000460791 C9orf129Q5T035 196 aaKnown RBP3.69□□□□□ -1.82
NXF3-203ENST00000460791 PHF5AQ7RTV0 110 aaKnown RBP3.69□□□□□ -1.82
NXF3-203ENST00000460791 KRTAP7-1Q8IUC3 87 aa3.69□□□□□ -1.82
NXF3-203ENST00000460791 LINC00474Q9P2X8 69 aa3.69□□□□□ -1.82
NXF3-203ENST00000460791 PKIGQ9Y2B9 76 aa3.69□□□□□ -1.82
NXF3-203ENST00000460791 FAT3Q8TDW7 4589 aa3.68□□□□□ -1.82
NXF3-203ENST00000460791 LEPROTO15243 131 aa3.68□□□□□ -1.82
NXF3-203ENST00000460791 LINC00158P58513 81 aa3.68□□□□□ -1.82
NXF3-203ENST00000460791 HERVK_113P61574 105 aa3.68□□□□□ -1.82
NXF3-203ENST00000460791 NDUFA12Q9UI09 145 aa3.68□□□□□ -1.82
NXF3-203ENST00000460791 ERG28Q9UKR5 140 aa3.68□□□□□ -1.82
NXF3-203ENST00000460791 LOC105371267A0A1B0GV96 52 aa3.67□□□□□ -1.82
NXF3-203ENST00000460791 J3QQQ9 107 aa3.67□□□□□ -1.82
NXF3-203ENST00000460791 PLA2G1BP04054 148 aaKnown RBP3.67□□□□□ -1.82
NXF3-203ENST00000460791 SMIM13P0DJ93 91 aa3.67□□□□□ -1.82
NXF3-203ENST00000460791 INAFM2P0DMQ5 153 aa3.67□□□□□ -1.82
NXF3-203ENST00000460791 LGALS3P17931 250 aaKnown RBP3.67□□□□□ -1.82
NXF3-203ENST00000460791 PYY3Q5JQD4 70 aa3.67□□□□□ -1.82
NXF3-203ENST00000460791 MEIG1Q5JSS6 88 aa3.67□□□□□ -1.82
NXF3-203ENST00000460791 KRTAP11-1Q8IUC1 163 aa3.67□□□□□ -1.82
NXF3-203ENST00000460791 C7orf33Q8WU49 177 aa3.67□□□□□ -1.82
NXF3-203ENST00000460791 PLEKHB2Q96CS7 222 aa3.67□□□□□ -1.82
NXF3-203ENST00000460791 SND1-IT1Q9HBX3 110 aa3.67□□□□□ -1.82
NXF3-203ENST00000460791 MYMXA0A1B0GTQ4 84 aa3.66□□□□□ -1.82
NXF3-203ENST00000460791 M0QXV9 152 aa3.66□□□□□ -1.82
NXF3-203ENST00000460791 TRIAP1O43715 76 aa3.66□□□□□ -1.82
NXF3-203ENST00000460791 HNRNPA3P51991 378 aaKnown RBP3.66□□□□□ -1.82
NXF3-203ENST00000460791 KRTAP10-4P60372 401 aaPredicted RBP3.66□□□□□ -1.82
NXF3-203ENST00000460791 DAND5Q8N907 189 aa3.66□□□□□ -1.82
NXF3-203ENST00000460791 Q8NDZ9 215 aa3.66□□□□□ -1.82
NXF3-203ENST00000460791 LRP1Q07954 4544 aaKnown RBP3.65□□□□□ -1.82
NXF3-203ENST00000460791 C20orf202A1L168 122 aa3.65□□□□□ -1.83
NXF3-203ENST00000460791 RPL37AP8A6NKH3 93 aa3.65□□□□□ -1.83
NXF3-203ENST00000460791 E9PLD3 99 aa3.65□□□□□ -1.83
NXF3-203ENST00000460791 UBE2BP63146 152 aa3.65□□□□□ -1.83
NXF3-203ENST00000460791 PCP2Q8IVA1 136 aa3.65□□□□□ -1.83
NXF3-203ENST00000460791 MIR7-3HGQ8N6C7 128 aa3.65□□□□□ -1.83
NXF3-203ENST00000460791 C22orf24Q9Y442 160 aa3.65□□□□□ -1.83
NXF3-203ENST00000460791 MYCBP2O75592 4640 aa3.64□□□□□ -1.83
NXF3-203ENST00000460791 DMBT1Q9UGM3 2413 aaPredicted RBP3.64□□□□□ -1.83
NXF3-203ENST00000460791 HSBP1L1C9JCN9 74 aa3.64□□□□□ -1.83
NXF3-203ENST00000460791 NMUP48645 174 aa3.64□□□□□ -1.83
NXF3-203ENST00000460791 AKR1D1P51857 326 aa3.64□□□□□ -1.83
NXF3-203ENST00000460791 NPC2P61916 151 aa3.64□□□□□ -1.83
NXF3-203ENST00000460791 HERV-K104P63124 156 aa3.64□□□□□ -1.83
NXF3-203ENST00000460791 PRR3P79522 188 aaKnown RBP3.64□□□□□ -1.83
NXF3-203ENST00000460791 JOSD1Q15040 202 aaPredicted RBP3.64□□□□□ -1.83
NXF3-203ENST00000460791 NKAPP1Q8N9T2 125 aa3.64□□□□□ -1.83
NXF3-203ENST00000460791 LINC00167Q96N53 147 aa3.64□□□□□ -1.83
NXF3-203ENST00000460791 PSORS1C2Q9UIG4 136 aa3.64□□□□□ -1.83
NXF3-203ENST00000460791 TNXBP22105 4242 aa3.63□□□□□ -1.83
NXF3-203ENST00000460791 A0A0J9YXY3 114 aa3.63□□□□□ -1.83
NXF3-203ENST00000460791 PCP4L1A6NKN8 68 aa3.63□□□□□ -1.83
NXF3-203ENST00000460791 ZNF815PA8K554 130 aa3.63□□□□□ -1.83
NXF3-203ENST00000460791 COX17Q14061 63 aa3.63□□□□□ -1.83
NXF3-203ENST00000460791 C1orf137Q5JT78 98 aa3.63□□□□□ -1.83
NXF3-203ENST00000460791 ADAMTSL4-AS1Q5T5F5 129 aa3.63□□□□□ -1.83
NXF3-203ENST00000460791 SFTA2Q6UW10 78 aa3.63□□□□□ -1.83
NXF3-203ENST00000460791 BOD1L2Q8IYS8 172 aa3.63□□□□□ -1.83
NXF3-203ENST00000460791 LITAFQ99732 161 aa3.63□□□□□ -1.83
NXF3-203ENST00000460791 NCR3O14931 201 aa3.62□□□□□ -1.83
NXF3-203ENST00000460791 LBHQ53QV2 105 aaPredicted RBP3.62□□□□□ -1.83
NXF3-203ENST00000460791 SOSTDC1Q6X4U4 206 aa3.62□□□□□ -1.83
NXF3-203ENST00000460791 MRPL55Q7Z7F7 128 aaKnown RBP3.62□□□□□ -1.83
NXF3-203ENST00000460791 PLA2G2DQ9UNK4 145 aa3.62□□□□□ -1.83
NXF3-203ENST00000460791 PAM16Q9Y3D7 125 aa3.62□□□□□ -1.83
NXF3-203ENST00000460791 IGLV5-37A0A075B6J1 123 aa3.61□□□□□ -1.83
NXF3-203ENST00000460791 IGKV2-28A0A075B6P5 120 aa3.61□□□□□ -1.83
NXF3-203ENST00000460791 LINC00587B1AMM8 73 aa3.61□□□□□ -1.83
NXF3-203ENST00000460791 IGKV2D-28P01615 120 aa3.61□□□□□ -1.83
NXF3-203ENST00000460791 RPL24P83731 157 aaKnown RBP3.61□□□□□ -1.83
NXF3-203ENST00000460791 TMEM238C9JI98 176 aa3.6□□□□□ -1.83
NXF3-203ENST00000460791 IGLV7-43P04211 117 aa3.6□□□□□ -1.83
NXF3-203ENST00000460791 SRSF9Q13242 221 aaKnown RBP eCLIP3.6□□□□□ -1.83
NXF3-203ENST00000460791 SPATA45Q537H7 98 aa3.6□□□□□ -1.83
NXF3-203ENST00000460791 SCGB1D4Q6XE38 83 aa3.6□□□□□ -1.83
NXF3-203ENST00000460791 C14orf144Q96I85 54 aa3.6□□□□□ -1.83
NXF3-203ENST00000460791 M0R378 163 aa3.59□□□□□ -1.83
NXF3-203ENST00000460791 C2orf91Q6ZV80 131 aa3.59□□□□□ -1.83
NXF3-203ENST00000460791 MIEN1Q9BRT3 115 aa3.59□□□□□ -1.83
NXF3-203ENST00000460791 PRO1933Q9H354 126 aa3.59□□□□□ -1.83
NXF3-203ENST00000460791 IGLV1-50A0A075B6I6 118 aa3.58□□□□□ -1.84
NXF3-203ENST00000460791 TRBV10-3A0A0K0K1G6 114 aa3.58□□□□□ -1.84
NXF3-203ENST00000460791 TIMM17BO60830 172 aa3.58□□□□□ -1.84
NXF3-203ENST00000460791 CTAG1AP78358 180 aa3.58□□□□□ -1.84
NXF3-203ENST00000460791 LINC00308Q8TCZ7 52 aa3.58□□□□□ -1.84
NXF3-203ENST00000460791 VAMP8Q9BV40 100 aa3.58□□□□□ -1.84
NXF3-203ENST00000460791 LOC107984156A0A0G2JMH3 177 aa3.57□□□□□ -1.84
NXF3-203ENST00000460791 BCE1O60756 84 aa3.57□□□□□ -1.84
NXF3-203ENST00000460791 COX8AP10176 69 aa3.57□□□□□ -1.84
NXF3-203ENST00000460791 UBE2AP49459 152 aa3.57□□□□□ -1.84
NXF3-203ENST00000460791 HERC1Q15751 4861 aa3.57□□□□□ -1.84
NXF3-203ENST00000460791 REG3GQ6UW15 175 aa3.57□□□□□ -1.84
NXF3-203ENST00000460791 SPINK6Q6UWN8 80 aa3.57□□□□□ -1.84
NXF3-203ENST00000460791 FAM19A1Q7Z5A9 133 aa3.57□□□□□ -1.84
NXF3-203ENST00000460791 MUSTN1Q8IVN3 82 aa3.57□□□□□ -1.84
NXF3-203ENST00000460791 ARL17AQ8IVW1 177 aa3.57□□□□□ -1.84
NXF3-203ENST00000460791 ZNF861PO60384 105 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms