RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	SFTA2	Q6UW10	78 aa		6.29	□□□□□ -1.4
MRPL55-223	ENST00000459783	TTTY13	Q9BZ97	58 aa		6.29	□□□□□ -1.4
MRPL55-223	ENST00000459783	LINC00158	P58513	81 aa		6.28	□□□□□ -1.4
MRPL55-223	ENST00000459783	HERVK_113	P61574	105 aa		6.28	□□□□□ -1.4
MRPL55-223	ENST00000459783	SNRPE	P62304	92 aa	Known RBP	6.28	□□□□□ -1.4
MRPL55-223	ENST00000459783	HERV-K104	P63124	156 aa		6.28	□□□□□ -1.4
MRPL55-223	ENST00000459783	ATOH7	Q8N100	152 aa		6.28	□□□□□ -1.4
MRPL55-223	ENST00000459783	LINC00167	Q96N53	147 aa		6.28	□□□□□ -1.4
MRPL55-223	ENST00000459783	TP73-AS1	Q9UF72	201 aa		6.28	□□□□□ -1.4
MRPL55-223	ENST00000459783	LRP1	Q07954	4544 aa	Known RBP	6.27	□□□□□ -1.4
MRPL55-223	ENST00000459783	MYMX	A0A1B0GTQ4	84 aa		6.27	□□□□□ -1.41
MRPL55-223	ENST00000459783	GAGE10	A6NGK3	116 aa		6.27	□□□□□ -1.41
MRPL55-223	ENST00000459783	C5orf52	A6NGY3	159 aa		6.27	□□□□□ -1.41
MRPL55-223	ENST00000459783	EIF4EBP3	O60516	100 aa	Predicted RBP	6.27	□□□□□ -1.41
MRPL55-223	ENST00000459783	ANKRD39	Q53RE8	183 aa		6.27	□□□□□ -1.41
MRPL55-223	ENST00000459783	MEIG1	Q5JSS6	88 aa		6.27	□□□□□ -1.41
MRPL55-223	ENST00000459783	C1orf137	Q5JT78	98 aa		6.27	□□□□□ -1.41
MRPL55-223	ENST00000459783	MRPL55	Q7Z7F7	128 aa	Known RBP	6.27	□□□□□ -1.41
MRPL55-223	ENST00000459783	MIR7-3HG	Q8N6C7	128 aa		6.27	□□□□□ -1.41
MRPL55-223	ENST00000459783	DAND5	Q8N907	189 aa		6.27	□□□□□ -1.41
MRPL55-223	ENST00000459783	PKHD1L1	Q86WI1	4243 aa		6.27	□□□□□ -1.41
MRPL55-223	ENST00000459783		A0A0J9YXY3	114 aa		6.26	□□□□□ -1.41
MRPL55-223	ENST00000459783	RPL37AP8	A6NKH3	93 aa		6.26	□□□□□ -1.41
MRPL55-223	ENST00000459783	KRTAP29-1	A8MX34	341 aa	Predicted RBP	6.26	□□□□□ -1.41
MRPL55-223	ENST00000459783	IGLV7-43	P04211	117 aa		6.26	□□□□□ -1.41
MRPL55-223	ENST00000459783	LGALS3	P17931	250 aa	Known RBP	6.26	□□□□□ -1.41
MRPL55-223	ENST00000459783	UBE2B	P63146	152 aa		6.26	□□□□□ -1.41
MRPL55-223	ENST00000459783	LITAF	Q99732	161 aa		6.26	□□□□□ -1.41
MRPL55-223	ENST00000459783	S100A6	P06703	90 aa		6.25	□□□□□ -1.41
MRPL55-223	ENST00000459783	MT1HL1	P0DM35	61 aa		6.25	□□□□□ -1.41
MRPL55-223	ENST00000459783	NMU	P48645	174 aa		6.25	□□□□□ -1.41
MRPL55-223	ENST00000459783	ADAMTSL4-AS1	Q5T5F5	129 aa		6.25	□□□□□ -1.41
MRPL55-223	ENST00000459783	S100A2	P29034	98 aa		6.24	□□□□□ -1.41
MRPL55-223	ENST00000459783	SOSTDC1	Q6X4U4	206 aa		6.24	□□□□□ -1.41
MRPL55-223	ENST00000459783	LOC107984156	A0A0G2JMH3	177 aa		6.23	□□□□□ -1.41
MRPL55-223	ENST00000459783	C20orf202	A1L168	122 aa		6.23	□□□□□ -1.41
MRPL55-223	ENST00000459783	LBH	Q53QV2	105 aa	Predicted RBP	6.23	□□□□□ -1.41
MRPL55-223	ENST00000459783	SPINK6	Q6UWN8	80 aa		6.23	□□□□□ -1.41
MRPL55-223	ENST00000459783	ARL17A	Q8IVW1	177 aa		6.23	□□□□□ -1.41
MRPL55-223	ENST00000459783	BOD1L2	Q8IYS8	172 aa		6.23	□□□□□ -1.41
MRPL55-223	ENST00000459783	NKAPP1	Q8N9T2	125 aa		6.23	□□□□□ -1.41
MRPL55-223	ENST00000459783	FAT3	Q8TDW7	4589 aa		6.23	□□□□□ -1.41
MRPL55-223	ENST00000459783	IGLV1-50	A0A075B6I6	118 aa		6.22	□□□□□ -1.41
MRPL55-223	ENST00000459783	IGKV2-28	A0A075B6P5	120 aa		6.22	□□□□□ -1.41
MRPL55-223	ENST00000459783	OXT	P01178	125 aa		6.22	□□□□□ -1.41
MRPL55-223	ENST00000459783	IGKV2D-28	P01615	120 aa		6.22	□□□□□ -1.41
MRPL55-223	ENST00000459783	ZNF815P	A8K554	130 aa		6.21	□□□□□ -1.42
MRPL55-223	ENST00000459783	TMEM238	C9JI98	176 aa		6.21	□□□□□ -1.42
MRPL55-223	ENST00000459783	NCR3	O14931	201 aa		6.21	□□□□□ -1.42
MRPL55-223	ENST00000459783	RPL24	P83731	157 aa	Known RBP	6.21	□□□□□ -1.42
MRPL55-223	ENST00000459783	KRTAP13-1	Q8IUC0	172 aa		6.21	□□□□□ -1.42
MRPL55-223	ENST00000459783	PCP2	Q8IVA1	136 aa		6.21	□□□□□ -1.42
MRPL55-223	ENST00000459783	LINC00587	B1AMM8	73 aa		6.2	□□□□□ -1.42
MRPL55-223	ENST00000459783	BCE1	O60756	84 aa		6.2	□□□□□ -1.42
MRPL55-223	ENST00000459783	NPC2	P61916	151 aa		6.2	□□□□□ -1.42
MRPL55-223	ENST00000459783		H0Y9J4	135 aa		6.19	□□□□□ -1.42
MRPL55-223	ENST00000459783		M0R378	163 aa		6.19	□□□□□ -1.42
MRPL55-223	ENST00000459783	KRTAP1-4	P0C5Y4	121 aa		6.19	□□□□□ -1.42
MRPL55-223	ENST00000459783		J3QL48	77 aa		6.18	□□□□□ -1.42
MRPL55-223	ENST00000459783	ZNF861P	O60384	105 aa		6.18	□□□□□ -1.42
MRPL55-223	ENST00000459783	TIMM17B	O60830	172 aa		6.18	□□□□□ -1.42
MRPL55-223	ENST00000459783	LINC01600	Q96MT4	127 aa		6.18	□□□□□ -1.42
MRPL55-223	ENST00000459783	TMEM126A	Q9H061	195 aa		6.18	□□□□□ -1.42
MRPL55-223	ENST00000459783	TRBV10-3	A0A0K0K1G6	114 aa		6.17	□□□□□ -1.42
MRPL55-223	ENST00000459783	LINC00308	Q8TCZ7	52 aa		6.17	□□□□□ -1.42
MRPL55-223	ENST00000459783	DIRC1	Q969H9	104 aa		6.17	□□□□□ -1.42
MRPL55-223	ENST00000459783	KRTAP10-8	P60410	259 aa		6.16	□□□□□ -1.42
MRPL55-223	ENST00000459783	PRLH	P81277	87 aa		6.16	□□□□□ -1.42
MRPL55-223	ENST00000459783	REG3G	Q6UW15	175 aa		6.16	□□□□□ -1.42
MRPL55-223	ENST00000459783	TMA7	Q9Y2S6	64 aa	Known RBP	6.16	□□□□□ -1.42
MRPL55-223	ENST00000459783	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	6.15	□□□□□ -1.42
MRPL55-223	ENST00000459783	NDUFC2	O95298	119 aa		6.15	□□□□□ -1.42
MRPL55-223	ENST00000459783	SCGB1D1	O95968	90 aa		6.15	□□□□□ -1.42
MRPL55-223	ENST00000459783	SPRR1A	P35321	89 aa		6.15	□□□□□ -1.42
MRPL55-223	ENST00000459783	AKR1D1	P51857	326 aa		6.15	□□□□□ -1.42
MRPL55-223	ENST00000459783	KCNQ1DN	Q9H478	68 aa		6.15	□□□□□ -1.42
MRPL55-223	ENST00000459783	TRBV10-2	A0A0K0K1G8	114 aa		6.14	□□□□□ -1.43
MRPL55-223	ENST00000459783	SPANXD	Q9BXN6	97 aa		6.14	□□□□□ -1.43
MRPL55-223	ENST00000459783	SPANXB1	Q9NS25	103 aa	Predicted RBP	6.14	□□□□□ -1.43
MRPL55-223	ENST00000459783	SPANXC	Q9NY87	97 aa		6.14	□□□□□ -1.43
MRPL55-223	ENST00000459783	PRY	O14603	147 aa		6.13	□□□□□ -1.43
MRPL55-223	ENST00000459783	IGLV6-57	P01721	117 aa		6.13	□□□□□ -1.43
MRPL55-223	ENST00000459783	RPL28	P46779	137 aa	Known RBP	6.13	□□□□□ -1.43
MRPL55-223	ENST00000459783	SCGB1D4	Q6XE38	83 aa		6.13	□□□□□ -1.43
MRPL55-223	ENST00000459783	FAM19A1	Q7Z5A9	133 aa		6.13	□□□□□ -1.43
MRPL55-223	ENST00000459783	PRR26	Q8N8Z3	221 aa		6.13	□□□□□ -1.43
MRPL55-223	ENST00000459783	MIEN1	Q9BRT3	115 aa		6.13	□□□□□ -1.43
MRPL55-223	ENST00000459783	DDT	P30046	118 aa		6.12	□□□□□ -1.43
MRPL55-223	ENST00000459783	UBE2A	P49459	152 aa		6.12	□□□□□ -1.43
MRPL55-223	ENST00000459783	JOSD1	Q15040	202 aa	Predicted RBP	6.12	□□□□□ -1.43
MRPL55-223	ENST00000459783	LINC00337	Q8N6G1	96 aa		6.11	□□□□□ -1.43
MRPL55-223	ENST00000459783	ANAPC11	Q9NYG5	84 aa		6.11	□□□□□ -1.43
MRPL55-223	ENST00000459783		A0A087X002	238 aa		6.1	□□□□□ -1.43
MRPL55-223	ENST00000459783	HSBP1L1	C9JCN9	74 aa		6.1	□□□□□ -1.43
MRPL55-223	ENST00000459783	PYY3	Q5JQD4	70 aa		6.1	□□□□□ -1.43
MRPL55-223	ENST00000459783	MUSTN1	Q8IVN3	82 aa		6.1	□□□□□ -1.43
MRPL55-223	ENST00000459783	TNXB	P22105	4242 aa		6.09	□□□□□ -1.43
MRPL55-223	ENST00000459783		B5MCH6	92 aa		6.09	□□□□□ -1.43
MRPL55-223	ENST00000459783	COX8A	P10176	69 aa		6.09	□□□□□ -1.43
MRPL55-223	ENST00000459783	SMCR5	Q8TEV8	140 aa		6.09	□□□□□ -1.43

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