RNA–Protein interactions for RNA: ENST00000458034.1

RFX3-211, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-211ENST00000458034 PRR3P79522 188 aaKnown RBP7.4□□□□□ -1.22
RFX3-211ENST00000458034 C6orf99Q4VX62 202 aa7.4□□□□□ -1.22
RFX3-211ENST00000458034 TENM4Q6N022 2769 aa7.4□□□□□ -1.23
RFX3-211ENST00000458034 SETD2Q9BYW2 2564 aaPredicted RBP7.39□□□□□ -1.23
RFX3-211ENST00000458034 ATP5EP2Q5VTU8 51 aa7.39□□□□□ -1.23
RFX3-211ENST00000458034 ENHOQ6UWT2 76 aa7.39□□□□□ -1.23
RFX3-211ENST00000458034 LINC00575Q6W349 94 aa7.39□□□□□ -1.23
RFX3-211ENST00000458034 C6orf223Q8N319 242 aa7.39□□□□□ -1.23
RFX3-211ENST00000458034 NF1P21359 2839 aa7.38□□□□□ -1.23
RFX3-211ENST00000458034 hADV29S1A0JD25 119 aa7.38□□□□□ -1.23
RFX3-211ENST00000458034 F8WDY8 70 aa7.38□□□□□ -1.23
RFX3-211ENST00000458034 ATOX1O00244 68 aa7.38□□□□□ -1.23
RFX3-211ENST00000458034 IGLV6-57P01721 117 aa7.38□□□□□ -1.23
RFX3-211ENST00000458034 C10orf25Q5T742 122 aa7.38□□□□□ -1.23
RFX3-211ENST00000458034 KPRPQ5T749 579 aaPredicted RBP7.38□□□□□ -1.23
RFX3-211ENST00000458034 KRTAP4-7Q9BYR0 210 aa7.38□□□□□ -1.23
RFX3-211ENST00000458034 KMT2BQ9UMN6 2715 aaPredicted RBP7.38□□□□□ -1.23
RFX3-211ENST00000458034 FN1P02751 2386 aaKnown RBP7.38□□□□□ -1.23
RFX3-211ENST00000458034 ZNF561-AS1K7EIQ3 104 aa7.37□□□□□ -1.23
RFX3-211ENST00000458034 C9orf129Q5T035 196 aaKnown RBP7.37□□□□□ -1.23
RFX3-211ENST00000458034 RPL18AQ02543 176 aaKnown RBP7.36□□□□□ -1.23
RFX3-211ENST00000458034 DIRC1Q969H9 104 aa7.36□□□□□ -1.23
RFX3-211ENST00000458034 LINC00846Q9NV44 126 aa7.36□□□□□ -1.23
RFX3-211ENST00000458034 C6orf48Q9UBA6 75 aa7.36□□□□□ -1.23
RFX3-211ENST00000458034 SS18L2Q9UHA2 77 aa7.36□□□□□ -1.23
RFX3-211ENST00000458034 UNC79Q9P2D8 2635 aa7.36□□□□□ -1.23
RFX3-211ENST00000458034 TRAV23DV6A0A075B6W5 121 aa7.35□□□□□ -1.23
RFX3-211ENST00000458034 UQCRQO14949 82 aa7.35□□□□□ -1.23
RFX3-211ENST00000458034 EGFEM1PQ0D2K5 195 aa7.35□□□□□ -1.23
RFX3-211ENST00000458034 C3orf22Q8N5N4 141 aa7.35□□□□□ -1.23
RFX3-211ENST00000458034 C2orf48Q96LS8 159 aa7.35□□□□□ -1.23
RFX3-211ENST00000458034 CAMK2N2Q96S95 79 aa7.35□□□□□ -1.23
RFX3-211ENST00000458034 FASNP49327 2511 aaKnown RBP7.35□□□□□ -1.23
RFX3-211ENST00000458034 TRBV7-6A0A0J9YX20 115 aa7.34□□□□□ -1.23
RFX3-211ENST00000458034 PDE6GP18545 87 aa7.34□□□□□ -1.23
RFX3-211ENST00000458034 HIST1H4AP62805 103 aaKnown RBP7.34□□□□□ -1.23
RFX3-211ENST00000458034 LCE1DQ5T752 114 aa7.34□□□□□ -1.23
RFX3-211ENST00000458034 IGKV3D-7A0A0C4DH55 119 aa7.33□□□□□ -1.24
RFX3-211ENST00000458034 RBM3P98179 157 aaKnown RBP7.33□□□□□ -1.24
RFX3-211ENST00000458034 C9orf153Q5TBE3 101 aa7.33□□□□□ -1.24
RFX3-211ENST00000458034 WFDC10BQ8IUB3 73 aa7.33□□□□□ -1.24
RFX3-211ENST00000458034 Q8NDZ9 215 aa7.33□□□□□ -1.24
RFX3-211ENST00000458034 LINC00526Q96FQ7 95 aa7.33□□□□□ -1.24
RFX3-211ENST00000458034 UBL5Q9BZL1 73 aa7.33□□□□□ -1.24
RFX3-211ENST00000458034 ITPR2Q14571 2701 aa7.33□□□□□ -1.24
RFX3-211ENST00000458034 CUBNO60494 3623 aa7.32□□□□□ -1.24
RFX3-211ENST00000458034 LOC110117498A0A087WWA1 95 aa7.32□□□□□ -1.24
RFX3-211ENST00000458034 COX7CP15954 63 aa7.32□□□□□ -1.24
RFX3-211ENST00000458034 COX7BP24311 80 aa7.32□□□□□ -1.24
RFX3-211ENST00000458034 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.32□□□□□ -1.24
RFX3-211ENST00000458034 Q6ZTC4 211 aa7.32□□□□□ -1.24
RFX3-211ENST00000458034 C1orf43Q9BWL3 253 aa7.32□□□□□ -1.24
RFX3-211ENST00000458034 RETNQ9HD89 108 aa7.32□□□□□ -1.24
RFX3-211ENST00000458034 LAMTOR3Q9UHA4 124 aa7.32□□□□□ -1.24
RFX3-211ENST00000458034 TRBV10-3A0A0K0K1G6 114 aa7.31□□□□□ -1.24
RFX3-211ENST00000458034 M0R378 163 aa7.31□□□□□ -1.24
RFX3-211ENST00000458034 NOTCH2Q04721 2471 aa7.31□□□□□ -1.24
RFX3-211ENST00000458034 OXLD1Q5BKU9 147 aa7.31□□□□□ -1.24
RFX3-211ENST00000458034 LINC01556Q5JQF7 62 aa7.31□□□□□ -1.24
RFX3-211ENST00000458034 DSCR8Q96T75 97 aa7.31□□□□□ -1.24
RFX3-211ENST00000458034 FAM229AH3BQW9 127 aa7.3□□□□□ -1.24
RFX3-211ENST00000458034 KRTAP10-11P60412 298 aa7.3□□□□□ -1.24
RFX3-211ENST00000458034 HIGD2BQ4VC39 106 aa7.3□□□□□ -1.24
RFX3-211ENST00000458034 KRTAP26-1Q6PEX3 210 aa7.3□□□□□ -1.24
RFX3-211ENST00000458034 DEFB131BA0A096LNP1 70 aa7.29□□□□□ -1.24
RFX3-211ENST00000458034 NDUFC2-KCTD14E9PQ53 114 aa7.29□□□□□ -1.24
RFX3-211ENST00000458034 ZNF73O43830 326 aaPredicted RBP7.29□□□□□ -1.24
RFX3-211ENST00000458034 VPREB1P12018 145 aa7.29□□□□□ -1.24
RFX3-211ENST00000458034 TNP2Q05952 138 aa7.29□□□□□ -1.24
RFX3-211ENST00000458034 Q6ZQT0 140 aa7.29□□□□□ -1.24
RFX3-211ENST00000458034 XAGE1AQ9HD64 81 aa7.29□□□□□ -1.24
RFX3-211ENST00000458034 HELZ2Q9BYK8 2649 aaKnown RBP7.29□□□□□ -1.24
RFX3-211ENST00000458034 ELOF1P60002 83 aaKnown RBP7.28□□□□□ -1.24
RFX3-211ENST00000458034 ESRGQ1W209 222 aa7.28□□□□□ -1.24
RFX3-211ENST00000458034 Q6ZQY7 126 aa7.28□□□□□ -1.24
RFX3-211ENST00000458034 Q6ZRU5 148 aa7.28□□□□□ -1.24
RFX3-211ENST00000458034 C3orf56Q8N813 242 aa7.28□□□□□ -1.24
RFX3-211ENST00000458034 C15orf56Q8N910 161 aa7.28□□□□□ -1.24
RFX3-211ENST00000458034 C11orf45Q8TAV5 145 aa7.28□□□□□ -1.24
RFX3-211ENST00000458034 IGKV2D-24A0A075B6R9 120 aa7.27□□□□□ -1.25
RFX3-211ENST00000458034 GCN1Q92616 2671 aaKnown RBP7.27□□□□□ -1.25
RFX3-211ENST00000458034 SYCNQ0VAF6 134 aa7.26□□□□□ -1.25
RFX3-211ENST00000458034 SERP2Q8N6R1 65 aa7.26□□□□□ -1.25
RFX3-211ENST00000458034 USP17L23D6RBM5 183 aa7.25□□□□□ -1.25
RFX3-211ENST00000458034 DNAH10OSP0CZ25 163 aa7.25□□□□□ -1.25
RFX3-211ENST00000458034 CRYGAP11844 174 aa7.25□□□□□ -1.25
RFX3-211ENST00000458034 MDFIQ99750 246 aa7.25□□□□□ -1.25
RFX3-211ENST00000458034 NSD1Q96L73 2696 aaPredicted RBP7.24□□□□□ -1.25
RFX3-211ENST00000458034 TRAV10A0A0B4J240 114 aa7.24□□□□□ -1.25
RFX3-211ENST00000458034 KRTAP24-1Q3LI83 254 aa7.24□□□□□ -1.25
RFX3-211ENST00000458034 RMI2Q96E14 147 aa7.24□□□□□ -1.25
RFX3-211ENST00000458034 BCE1O60756 84 aa7.23□□□□□ -1.25
RFX3-211ENST00000458034 NKAPP1Q8N9T2 125 aa7.23□□□□□ -1.25
RFX3-211ENST00000458034 A0A087WVE0 104 aa7.22□□□□□ -1.25
RFX3-211ENST00000458034 UPK3BQ9BT76 320 aa7.22□□□□□ -1.25
RFX3-211ENST00000458034 PLA2G2DQ9UNK4 145 aa7.22□□□□□ -1.25
RFX3-211ENST00000458034 TRBV7-4A0A0J9YYF1 115 aa7.21□□□□□ -1.26
RFX3-211ENST00000458034 TLX1NBP0CAT3 122 aa7.21□□□□□ -1.26
RFX3-211ENST00000458034 CXCL6P80162 114 aa7.21□□□□□ -1.26
RFX3-211ENST00000458034 NIPBLQ6KC79 2804 aaeCLIP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms