RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 LINC01556Q5JQF7 62 aa11.15□□□□□ -0.62
CCDC43-202ENST00000457422 OBSCN-AS1Q96MR7 158 aa11.15□□□□□ -0.62
CCDC43-202ENST00000457422 A0A1B0GV72 72 aa11.15□□□□□ -0.63
CCDC43-202ENST00000457422 GAGE2BQ13066 116 aa11.14□□□□□ -0.63
CCDC43-202ENST00000457422 GAGE2EQ4V326 116 aa11.14□□□□□ -0.63
CCDC43-202ENST00000457422 GAGE2DQ9UEU5 116 aa11.14□□□□□ -0.63
CCDC43-202ENST00000457422 PRB2P02812 416 aaPredicted RBP11.13□□□□□ -0.63
CCDC43-202ENST00000457422 HIGD2BQ4VC39 106 aa11.13□□□□□ -0.63
CCDC43-202ENST00000457422 ORMDL1Q9P0S3 153 aa11.13□□□□□ -0.63
CCDC43-202ENST00000457422 NOTCH1P46531 2555 aa11.13□□□□□ -0.63
CCDC43-202ENST00000457422 SLPIP03973 132 aa11.13□□□□□ -0.63
CCDC43-202ENST00000457422 TTC32Q5I0X7 151 aa11.13□□□□□ -0.63
CCDC43-202ENST00000457422 S100A7L2Q5SY68 101 aa11.13□□□□□ -0.63
CCDC43-202ENST00000457422 ZNF561-AS1K7EIQ3 104 aa11.12□□□□□ -0.63
CCDC43-202ENST00000457422 SDIM1Q6ZPB5 146 aa11.12□□□□□ -0.63
CCDC43-202ENST00000457422 Q8N814 137 aa11.12□□□□□ -0.63
CCDC43-202ENST00000457422 IGLV6-57P01721 117 aa11.12□□□□□ -0.63
CCDC43-202ENST00000457422 C15orf56Q8N910 161 aa11.11□□□□□ -0.63
CCDC43-202ENST00000457422 C6orf99Q4VX62 202 aa11.1□□□□□ -0.63
CCDC43-202ENST00000457422 C9orf129Q5T035 196 aaKnown RBP11.1□□□□□ -0.63
CCDC43-202ENST00000457422 C2orf48Q96LS8 159 aa11.1□□□□□ -0.63
CCDC43-202ENST00000457422 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
CCDC43-202ENST00000457422 COL6A5A8TX70 2615 aa11.1□□□□□ -0.63
CCDC43-202ENST00000457422 C1orf43Q9BWL3 253 aa11.09□□□□□ -0.63
CCDC43-202ENST00000457422 DNAH10OSP0CZ25 163 aa11.08□□□□□ -0.63
CCDC43-202ENST00000457422 TM2D3Q9BRN9 247 aa11.08□□□□□ -0.63
CCDC43-202ENST00000457422 HUWE1Q7Z6Z7 4374 aaKnown RBP11.08□□□□□ -0.64
CCDC43-202ENST00000457422 TRAV10A0A0B4J240 114 aa11.08□□□□□ -0.64
CCDC43-202ENST00000457422 TRBV7-7A0A0K0K1E9 115 aa11.08□□□□□ -0.64
CCDC43-202ENST00000457422 RPL18AQ02543 176 aaKnown RBP11.08□□□□□ -0.64
CCDC43-202ENST00000457422 XAGE1AQ9HD64 81 aa11.08□□□□□ -0.64
CCDC43-202ENST00000457422 F8WDY8 70 aa11.07□□□□□ -0.64
CCDC43-202ENST00000457422 GAGE2AQ6NT46 116 aa11.07□□□□□ -0.64
CCDC43-202ENST00000457422 LINC00575Q6W349 94 aa11.07□□□□□ -0.64
CCDC43-202ENST00000457422 SMCR5Q8TEV8 140 aa11.07□□□□□ -0.64
CCDC43-202ENST00000457422 C14orf132Q9NPU4 83 aa11.07□□□□□ -0.64
CCDC43-202ENST00000457422 K7EIL1 84 aa11.06□□□□□ -0.64
CCDC43-202ENST00000457422 Q6ZRU5 148 aa11.06□□□□□ -0.64
CCDC43-202ENST00000457422 LINC00643Q86TS7 51 aa11.06□□□□□ -0.64
CCDC43-202ENST00000457422 IGKV2D-24A0A075B6R9 120 aa11.05□□□□□ -0.64
CCDC43-202ENST00000457422 TMEM256-PLSCR3K7ERE1 68 aa11.05□□□□□ -0.64
CCDC43-202ENST00000457422 MRAPQ8TCY5 172 aa11.05□□□□□ -0.64
CCDC43-202ENST00000457422 NBEAL1Q6ZS30 2694 aa11.04□□□□□ -0.64
CCDC43-202ENST00000457422 IMUPQ9GZP8 106 aa11.04□□□□□ -0.64
CCDC43-202ENST00000457422 TRBV10-3A0A0K0K1G6 114 aa11.03□□□□□ -0.64
CCDC43-202ENST00000457422 NDUFC2-KCTD14E9PQ53 114 aa11.03□□□□□ -0.64
CCDC43-202ENST00000457422 JMJD7-PLA2G4BH0Y9G9 81 aa11.03□□□□□ -0.64
CCDC43-202ENST00000457422 NDUFV3P56181 108 aaKnown RBP11.03□□□□□ -0.64
CCDC43-202ENST00000457422 VPREB1P12018 145 aa11.02□□□□□ -0.64
CCDC43-202ENST00000457422 TRAV23DV6A0A075B6W5 121 aa11.02□□□□□ -0.65
CCDC43-202ENST00000457422 ANAPC13Q9BS18 74 aa11.02□□□□□ -0.65
CCDC43-202ENST00000457422 hADV29S1A0JD25 119 aa11.01□□□□□ -0.65
CCDC43-202ENST00000457422 LINC00588Q9Y4M8 146 aa11.01□□□□□ -0.65
CCDC43-202ENST00000457422 DIRC1Q969H9 104 aa10.99□□□□□ -0.65
CCDC43-202ENST00000457422 NHLRC4P0CG21 123 aaPredicted RBP10.99□□□□□ -0.65
CCDC43-202ENST00000457422 DNAH1Q9P2D7 4330 aa10.98□□□□□ -0.65
CCDC43-202ENST00000457422 SYCNQ0VAF6 134 aa10.98□□□□□ -0.65
CCDC43-202ENST00000457422 TRBV7-6A0A0J9YX20 115 aa10.97□□□□□ -0.65
CCDC43-202ENST00000457422 M0R378 163 aa10.97□□□□□ -0.65
CCDC43-202ENST00000457422 ZNF73O43830 326 aaPredicted RBP10.97□□□□□ -0.65
CCDC43-202ENST00000457422 CCKP06307 115 aa10.97□□□□□ -0.65
CCDC43-202ENST00000457422 Q6ZRP5 223 aa10.97□□□□□ -0.65
CCDC43-202ENST00000457422 H3BQ85 93 aa10.96□□□□□ -0.66
CCDC43-202ENST00000457422 ELOF1P60002 83 aaKnown RBP10.94□□□□□ -0.66
CCDC43-202ENST00000457422 LINC00846Q9NV44 126 aa10.94□□□□□ -0.66
CCDC43-202ENST00000457422 COX7BP24311 80 aa10.94□□□□□ -0.66
CCDC43-202ENST00000457422 UPK3BQ9BT76 320 aa10.94□□□□□ -0.66
CCDC43-202ENST00000457422 TLX1NBP0CAT3 122 aa10.93□□□□□ -0.66
CCDC43-202ENST00000457422 CASC10Q5T4H9 136 aa10.92□□□□□ -0.66
CCDC43-202ENST00000457422 Q6ZQY7 126 aa10.92□□□□□ -0.66
CCDC43-202ENST00000457422 MGAM2Q2M2H8 2515 aa10.92□□□□□ -0.66
CCDC43-202ENST00000457422 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.91□□□□□ -0.66
CCDC43-202ENST00000457422 RMI2Q96E14 147 aa10.91□□□□□ -0.66
CCDC43-202ENST00000457422 Q6JHZ5 121 aa10.91□□□□□ -0.66
CCDC43-202ENST00000457422 USP17L23D6RBM5 183 aa10.89□□□□□ -0.67
CCDC43-202ENST00000457422 RBM3P98179 157 aaKnown RBP10.89□□□□□ -0.67
CCDC43-202ENST00000457422 LOC110117498A0A087WWA1 95 aa10.88□□□□□ -0.67
CCDC43-202ENST00000457422 FAM236AA0A1B0GUQ0 79 aa10.88□□□□□ -0.67
CCDC43-202ENST00000457422 FAM236BA0A1B0GV22 79 aa10.88□□□□□ -0.67
CCDC43-202ENST00000457422 GHRHP01286 108 aa10.88□□□□□ -0.67
CCDC43-202ENST00000457422 PLA2G2DQ9UNK4 145 aa10.88□□□□□ -0.67
CCDC43-202ENST00000457422 DNAH9Q9NYC9 4486 aa10.88□□□□□ -0.67
CCDC43-202ENST00000457422 LINC00528Q8N1L1 170 aa10.87□□□□□ -0.67
CCDC43-202ENST00000457422 LAMTOR3Q9UHA4 124 aa10.87□□□□□ -0.67
CCDC43-202ENST00000457422 Q6ZQT0 140 aa10.86□□□□□ -0.67
CCDC43-202ENST00000457422 SERTAD4-AS1Q5TG53 156 aa10.85□□□□□ -0.67
CCDC43-202ENST00000457422 NKAPP1Q8N9T2 125 aa10.85□□□□□ -0.67
CCDC43-202ENST00000457422 KCNQ1DNQ9H478 68 aa10.85□□□□□ -0.67
CCDC43-202ENST00000457422 PDE6GP18545 87 aa10.83□□□□□ -0.68
CCDC43-202ENST00000457422 IGLV5-37A0A075B6J1 123 aa10.83□□□□□ -0.68
CCDC43-202ENST00000457422 C7orf33Q8WU49 177 aa10.83□□□□□ -0.68
CCDC43-202ENST00000457422 IGKV3D-7A0A0C4DH55 119 aa10.82□□□□□ -0.68
CCDC43-202ENST00000457422 HIST1H4AP62805 103 aaKnown RBP10.81□□□□□ -0.68
CCDC43-202ENST00000457422 ATP5EP2Q5VTU8 51 aa10.81□□□□□ -0.68
CCDC43-202ENST00000457422 DSCR8Q96T75 97 aa10.81□□□□□ -0.68
CCDC43-202ENST00000457422 CCDC179H3BU77 68 aa10.81□□□□□ -0.68
CCDC43-202ENST00000457422 MDFIQ99750 246 aa10.81□□□□□ -0.68
CCDC43-202ENST00000457422 STAB2Q8WWQ8 2551 aa10.8□□□□□ -0.68
CCDC43-202ENST00000457422 COL7A1Q02388 2944 aa10.8□□□□□ -0.68
CCDC43-202ENST00000457422 DYNC2H1Q8NCM8 4307 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 164.7 ms