RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 LEPROTO15243 131 aa6.28□□□□□ -1.4
ATG4A-206ENST00000457035 PLA2G1BP04054 148 aaKnown RBP6.28□□□□□ -1.4
ATG4A-206ENST00000457035 S100A6P06703 90 aa6.28□□□□□ -1.4
ATG4A-206ENST00000457035 KRTDAPP60985 99 aa6.28□□□□□ -1.4
ATG4A-206ENST00000457035 SFTA2Q6UW10 78 aa6.28□□□□□ -1.4
ATG4A-206ENST00000457035 HIST1H2BLQ99880 126 aa6.28□□□□□ -1.4
ATG4A-206ENST00000457035 DMBT1Q9UGM3 2413 aaPredicted RBP6.27□□□□□ -1.41
ATG4A-206ENST00000457035 HERC1Q15751 4861 aa6.27□□□□□ -1.41
ATG4A-206ENST00000457035 C5orf52A6NGY3 159 aa6.27□□□□□ -1.41
ATG4A-206ENST00000457035 PFN2P35080 140 aa6.27□□□□□ -1.41
ATG4A-206ENST00000457035 TSPEAR-AS2P59090 65 aa6.27□□□□□ -1.41
ATG4A-206ENST00000457035 SNRPEP62304 92 aaKnown RBP6.27□□□□□ -1.41
ATG4A-206ENST00000457035 COX17Q14061 63 aa6.27□□□□□ -1.41
ATG4A-206ENST00000457035 XAGE1AQ9HD64 81 aa6.27□□□□□ -1.41
ATG4A-206ENST00000457035 ERG28Q9UKR5 140 aa6.27□□□□□ -1.41
ATG4A-206ENST00000457035 HERVK_113P61574 105 aa6.26□□□□□ -1.41
ATG4A-206ENST00000457035 PHF5AQ7RTV0 110 aaKnown RBP6.26□□□□□ -1.41
ATG4A-206ENST00000457035 PLEKHB2Q96CS7 222 aa6.26□□□□□ -1.41
ATG4A-206ENST00000457035 NDUFA12Q9UI09 145 aa6.26□□□□□ -1.41
ATG4A-206ENST00000457035 E9PLD3 99 aa6.25□□□□□ -1.41
ATG4A-206ENST00000457035 J3QQQ9 107 aa6.25□□□□□ -1.41
ATG4A-206ENST00000457035 S100A2P29034 98 aa6.25□□□□□ -1.41
ATG4A-206ENST00000457035 RPL37AP61513 92 aaKnown RBP6.25□□□□□ -1.41
ATG4A-206ENST00000457035 SERTAD4-AS1Q5TG53 156 aa6.25□□□□□ -1.41
ATG4A-206ENST00000457035 FAM19A5Q7Z5A7 132 aaPredicted RBP6.25□□□□□ -1.41
ATG4A-206ENST00000457035 C7orf33Q8WU49 177 aa6.25□□□□□ -1.41
ATG4A-206ENST00000457035 MYCBP2O75592 4640 aa6.25□□□□□ -1.41
ATG4A-206ENST00000457035 LRP1Q07954 4544 aaKnown RBP6.24□□□□□ -1.41
ATG4A-206ENST00000457035 FAT3Q8TDW7 4589 aa6.24□□□□□ -1.41
ATG4A-206ENST00000457035 MYMXA0A1B0GTQ4 84 aa6.24□□□□□ -1.41
ATG4A-206ENST00000457035 HERV-K104P63124 156 aa6.24□□□□□ -1.41
ATG4A-206ENST00000457035 SND1-IT1Q9HBX3 110 aa6.24□□□□□ -1.41
ATG4A-206ENST00000457035 PLA2G2DQ9UNK4 145 aa6.24□□□□□ -1.41
ATG4A-206ENST00000457035 SMIM13P0DJ93 91 aa6.23□□□□□ -1.41
ATG4A-206ENST00000457035 NMUP48645 174 aa6.23□□□□□ -1.41
ATG4A-206ENST00000457035 LINC00158P58513 81 aa6.23□□□□□ -1.41
ATG4A-206ENST00000457035 KRTAP11-1Q8IUC1 163 aa6.23□□□□□ -1.41
ATG4A-206ENST00000457035 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
ATG4A-206ENST00000457035 C22orf24Q9Y442 160 aa6.23□□□□□ -1.41
ATG4A-206ENST00000457035 IGKV2D-26A0A0A0MRZ7 120 aa6.22□□□□□ -1.41
ATG4A-206ENST00000457035 A0A0U1RRA0 63 aa6.22□□□□□ -1.41
ATG4A-206ENST00000457035 C20orf202A1L168 122 aa6.22□□□□□ -1.41
ATG4A-206ENST00000457035 LGALS3P17931 250 aaKnown RBP6.22□□□□□ -1.41
ATG4A-206ENST00000457035 HNRNPA3P51991 378 aaKnown RBP6.22□□□□□ -1.41
ATG4A-206ENST00000457035 IGLV5-37A0A075B6J1 123 aa6.21□□□□□ -1.42
ATG4A-206ENST00000457035 LINC00587B1AMM8 73 aa6.21□□□□□ -1.42
ATG4A-206ENST00000457035 M0QXV9 152 aa6.21□□□□□ -1.42
ATG4A-206ENST00000457035 PRR3P79522 188 aaKnown RBP6.21□□□□□ -1.42
ATG4A-206ENST00000457035 MEIG1Q5JSS6 88 aa6.21□□□□□ -1.42
ATG4A-206ENST00000457035 TP73-AS1Q9UF72 201 aa6.21□□□□□ -1.42
ATG4A-206ENST00000457035 PSORS1C2Q9UIG4 136 aa6.21□□□□□ -1.42
ATG4A-206ENST00000457035 AKR1D1P51857 326 aa6.2□□□□□ -1.42
ATG4A-206ENST00000457035 ATOH7Q8N100 152 aa6.2□□□□□ -1.42
ATG4A-206ENST00000457035 MIR7-3HGQ8N6C7 128 aa6.2□□□□□ -1.42
ATG4A-206ENST00000457035 Q8NDZ9 215 aa6.2□□□□□ -1.42
ATG4A-206ENST00000457035 LOC107984156A0A0G2JMH3 177 aa6.19□□□□□ -1.42
ATG4A-206ENST00000457035 A0A0J9YXY3 114 aa6.19□□□□□ -1.42
ATG4A-206ENST00000457035 VPREB1P12018 145 aa6.19□□□□□ -1.42
ATG4A-206ENST00000457035 LBHQ53QV2 105 aaPredicted RBP6.19□□□□□ -1.42
ATG4A-206ENST00000457035 MRPL55Q7Z7F7 128 aaKnown RBP6.19□□□□□ -1.42
ATG4A-206ENST00000457035 ARL17AQ8IVW1 177 aa6.19□□□□□ -1.42
ATG4A-206ENST00000457035 LINC00167Q96N53 147 aa6.19□□□□□ -1.42
ATG4A-206ENST00000457035 TTTY13Q9BZ97 58 aa6.19□□□□□ -1.42
ATG4A-206ENST00000457035 SRSF9Q13242 221 aaKnown RBP eCLIP6.18□□□□□ -1.42
ATG4A-206ENST00000457035 ADAMTSL4-AS1Q5T5F5 129 aa6.18□□□□□ -1.42
ATG4A-206ENST00000457035 UBE2BP63146 152 aa6.17□□□□□ -1.42
ATG4A-206ENST00000457035 RPL24P83731 157 aaKnown RBP6.17□□□□□ -1.42
ATG4A-206ENST00000457035 C1orf137Q5JT78 98 aa6.17□□□□□ -1.42
ATG4A-206ENST00000457035 DAND5Q8N907 189 aa6.17□□□□□ -1.42
ATG4A-206ENST00000457035 RPL37AP8A6NKH3 93 aa6.16□□□□□ -1.42
ATG4A-206ENST00000457035 ZNF815PA8K554 130 aa6.16□□□□□ -1.42
ATG4A-206ENST00000457035 NKAPP1Q8N9T2 125 aa6.16□□□□□ -1.42
ATG4A-206ENST00000457035 LITAFQ99732 161 aa6.16□□□□□ -1.42
ATG4A-206ENST00000457035 GAGE10A6NGK3 116 aa6.15□□□□□ -1.42
ATG4A-206ENST00000457035 TIMM17BO60830 172 aa6.15□□□□□ -1.42
ATG4A-206ENST00000457035 SCGB1D1O95968 90 aa6.15□□□□□ -1.42
ATG4A-206ENST00000457035 PCP2Q8IVA1 136 aa6.15□□□□□ -1.42
ATG4A-206ENST00000457035 BOD1L2Q8IYS8 172 aa6.15□□□□□ -1.42
ATG4A-206ENST00000457035 IGLV1-50A0A075B6I6 118 aa6.14□□□□□ -1.43
ATG4A-206ENST00000457035 IGLV7-43P04211 117 aa6.14□□□□□ -1.43
ATG4A-206ENST00000457035 SPINK6Q6UWN8 80 aa6.14□□□□□ -1.43
ATG4A-206ENST00000457035 SOSTDC1Q6X4U4 206 aa6.14□□□□□ -1.43
ATG4A-206ENST00000457035 TNXBP22105 4242 aa6.14□□□□□ -1.43
ATG4A-206ENST00000457035 KRTAP29-1A8MX34 341 aaPredicted RBP6.13□□□□□ -1.43
ATG4A-206ENST00000457035 M0R378 163 aa6.13□□□□□ -1.43
ATG4A-206ENST00000457035 IGKV2-28A0A075B6P5 120 aa6.12□□□□□ -1.43
ATG4A-206ENST00000457035 HSBP1L1C9JCN9 74 aa6.12□□□□□ -1.43
ATG4A-206ENST00000457035 IGKV2D-28P01615 120 aa6.12□□□□□ -1.43
ATG4A-206ENST00000457035 JOSD1Q15040 202 aaPredicted RBP6.12□□□□□ -1.43
ATG4A-206ENST00000457035 NDUFC2O95298 119 aa6.11□□□□□ -1.43
ATG4A-206ENST00000457035 NPC2P61916 151 aa6.11□□□□□ -1.43
ATG4A-206ENST00000457035 LINC00308Q8TCZ7 52 aa6.11□□□□□ -1.43
ATG4A-206ENST00000457035 TRBV10-2A0A0K0K1G8 114 aa6.1□□□□□ -1.43
ATG4A-206ENST00000457035 ZNF861PO60384 105 aa6.1□□□□□ -1.43
ATG4A-206ENST00000457035 BCE1O60756 84 aa6.1□□□□□ -1.43
ATG4A-206ENST00000457035 OXTP01178 125 aa6.1□□□□□ -1.43
ATG4A-206ENST00000457035 SCGB1D4Q6XE38 83 aa6.1□□□□□ -1.43
ATG4A-206ENST00000457035 MIEN1Q9BRT3 115 aa6.1□□□□□ -1.43
ATG4A-206ENST00000457035 TMEM238C9JI98 176 aa6.09□□□□□ -1.43
ATG4A-206ENST00000457035 NCR3O14931 201 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms