RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	FSIP2	Q5CZC0	6907 aa		7.97	□□□□□ -1.13
SNHG17-208	ENST00000456953	IGLV1-50	A0A075B6I6	118 aa		7.96	□□□□□ -1.14
SNHG17-208	ENST00000456953		A0A1W2PNN7	141 aa		7.96	□□□□□ -1.14
SNHG17-208	ENST00000456953		E9PLD3	99 aa		7.96	□□□□□ -1.14
SNHG17-208	ENST00000456953	GAGE2B	Q13066	116 aa		7.96	□□□□□ -1.14
SNHG17-208	ENST00000456953	JOSD1	Q15040	202 aa	Predicted RBP	7.96	□□□□□ -1.14
SNHG17-208	ENST00000456953	UNQ6190/PRO20217	Q6UXQ8	127 aa		7.96	□□□□□ -1.14
SNHG17-208	ENST00000456953	LOC107984640	A0A0U1RRK4	108 aa		7.95	□□□□□ -1.14
SNHG17-208	ENST00000456953		J3QQQ9	107 aa		7.95	□□□□□ -1.14
SNHG17-208	ENST00000456953	SFTA2	Q6UW10	78 aa		7.95	□□□□□ -1.14
SNHG17-208	ENST00000456953		H0Y9J4	135 aa		7.94	□□□□□ -1.14
SNHG17-208	ENST00000456953	C10orf25	Q5T742	122 aa		7.94	□□□□□ -1.14
SNHG17-208	ENST00000456953	NDUFA12	Q9UI09	145 aa		7.94	□□□□□ -1.14
SNHG17-208	ENST00000456953	TRBV30	A0A0K0K1B3	111 aa		7.93	□□□□□ -1.14
SNHG17-208	ENST00000456953	IGLV7-43	P04211	117 aa		7.93	□□□□□ -1.14
SNHG17-208	ENST00000456953	NMU	P48645	174 aa		7.93	□□□□□ -1.14
SNHG17-208	ENST00000456953	ANKRD39	Q53RE8	183 aa		7.93	□□□□□ -1.14
SNHG17-208	ENST00000456953	C9orf116	Q5BN46	136 aa	Predicted RBP	7.93	□□□□□ -1.14
SNHG17-208	ENST00000456953	C6orf48	Q9UBA6	75 aa		7.93	□□□□□ -1.14
SNHG17-208	ENST00000456953	MYMX	A0A1B0GTQ4	84 aa		7.92	□□□□□ -1.14
SNHG17-208	ENST00000456953	TSPEAR-AS2	P59090	65 aa		7.92	□□□□□ -1.14
SNHG17-208	ENST00000456953	RNF151	Q2KHN1	245 aa		7.92	□□□□□ -1.14
SNHG17-208	ENST00000456953	PYY3	Q5JQD4	70 aa		7.92	□□□□□ -1.14
SNHG17-208	ENST00000456953	ZNF625	Q96I27	306 aa	Predicted RBP	7.92	□□□□□ -1.14
SNHG17-208	ENST00000456953	VAMP8	Q9BV40	100 aa		7.92	□□□□□ -1.14
SNHG17-208	ENST00000456953	IGKV2D-26	A0A0A0MRZ7	120 aa		7.91	□□□□□ -1.14
SNHG17-208	ENST00000456953	RPL13A	P40429	203 aa	Known RBP	7.91	□□□□□ -1.14
SNHG17-208	ENST00000456953	HERV-K104	P63124	156 aa		7.91	□□□□□ -1.14
SNHG17-208	ENST00000456953	ZNF815P	A8K554	130 aa		7.9	□□□□□ -1.14
SNHG17-208	ENST00000456953	KRTAP1-4	P0C5Y4	121 aa		7.9	□□□□□ -1.14
SNHG17-208	ENST00000456953	PHF5A	Q7RTV0	110 aa	Known RBP	7.9	□□□□□ -1.14
SNHG17-208	ENST00000456953	LOC105371267	A0A1B0GV96	52 aa		7.89	□□□□□ -1.15
SNHG17-208	ENST00000456953	RPL18A	Q02543	176 aa	Known RBP	7.89	□□□□□ -1.15
SNHG17-208	ENST00000456953	MEIG1	Q5JSS6	88 aa		7.89	□□□□□ -1.15
SNHG17-208	ENST00000456953	ERG28	Q9UKR5	140 aa		7.89	□□□□□ -1.15
SNHG17-208	ENST00000456953	PAM16	Q9Y3D7	125 aa		7.89	□□□□□ -1.15
SNHG17-208	ENST00000456953	LINC00587	B1AMM8	73 aa		7.88	□□□□□ -1.15
SNHG17-208	ENST00000456953	PFN2	P35080	140 aa		7.88	□□□□□ -1.15
SNHG17-208	ENST00000456953	SPATA45	Q537H7	98 aa		7.88	□□□□□ -1.15
SNHG17-208	ENST00000456953	TTTY13	Q9BZ97	58 aa		7.88	□□□□□ -1.15
SNHG17-208	ENST00000456953	NDUFC2-KCTD14	E9PQ53	114 aa		7.87	□□□□□ -1.15
SNHG17-208	ENST00000456953	LINC00158	P58513	81 aa		7.87	□□□□□ -1.15
SNHG17-208	ENST00000456953	S100A12	P80511	92 aa		7.87	□□□□□ -1.15
SNHG17-208	ENST00000456953	PCP2	Q8IVA1	136 aa		7.87	□□□□□ -1.15
SNHG17-208	ENST00000456953		A0A0U1RRA0	63 aa		7.86	□□□□□ -1.15
SNHG17-208	ENST00000456953	TLX1NB	P0CAT3	122 aa		7.86	□□□□□ -1.15
SNHG17-208	ENST00000456953	COX17	Q14061	63 aa		7.86	□□□□□ -1.15
SNHG17-208	ENST00000456953	GAGE2E	Q4V326	116 aa		7.86	□□□□□ -1.15
SNHG17-208	ENST00000456953	SCGB1D4	Q6XE38	83 aa		7.86	□□□□□ -1.15
SNHG17-208	ENST00000456953	GAGE2D	Q9UEU5	116 aa		7.86	□□□□□ -1.15
SNHG17-208	ENST00000456953	SMIM6	P0DI80	62 aa		7.85	□□□□□ -1.15
SNHG17-208	ENST00000456953		A0A0J9YXY3	114 aa		7.84	□□□□□ -1.15
SNHG17-208	ENST00000456953	SMIM13	P0DJ93	91 aa		7.84	□□□□□ -1.15
SNHG17-208	ENST00000456953	COX8A	P10176	69 aa		7.83	□□□□□ -1.16
SNHG17-208	ENST00000456953	KRTAP11-1	Q8IUC1	163 aa		7.83	□□□□□ -1.16
SNHG17-208	ENST00000456953	TSPAN13	O95857	204 aa		7.82	□□□□□ -1.16
SNHG17-208	ENST00000456953	C14orf144	Q96I85	54 aa		7.82	□□□□□ -1.16
SNHG17-208	ENST00000456953	XAGE1A	Q9HD64	81 aa		7.82	□□□□□ -1.16
SNHG17-208	ENST00000456953	TIMM17B	O60830	172 aa		7.81	□□□□□ -1.16
SNHG17-208	ENST00000456953	MIR7-3HG	Q8N6C7	128 aa		7.81	□□□□□ -1.16
SNHG17-208	ENST00000456953	SND1-IT1	Q9HBX3	110 aa		7.81	□□□□□ -1.16
SNHG17-208	ENST00000456953	MUC17	Q685J3	4493 aa		7.81	□□□□□ -1.16
SNHG17-208	ENST00000456953	TMEM238	C9JI98	176 aa		7.8	□□□□□ -1.16
SNHG17-208	ENST00000456953	SLC25A34	Q6PIV7	304 aa		7.8	□□□□□ -1.16
SNHG17-208	ENST00000456953	BOD1L2	Q8IYS8	172 aa		7.8	□□□□□ -1.16
SNHG17-208	ENST00000456953	DAND5	Q8N907	189 aa		7.8	□□□□□ -1.16
SNHG17-208	ENST00000456953	CRCT1	Q9UGL9	99 aa		7.8	□□□□□ -1.16
SNHG17-208	ENST00000456953	FAM168B	A1KXE4	195 aa		7.79	□□□□□ -1.16
SNHG17-208	ENST00000456953	DLEU1	O43261	78 aa		7.79	□□□□□ -1.16
SNHG17-208	ENST00000456953	LCE2D	Q5TA82	110 aa	Predicted RBP	7.79	□□□□□ -1.16
SNHG17-208	ENST00000456953	MIEN1	Q9BRT3	115 aa		7.79	□□□□□ -1.16
SNHG17-208	ENST00000456953	C9orf129	Q5T035	196 aa	Known RBP	7.78	□□□□□ -1.16
SNHG17-208	ENST00000456953	ADAMTSL4-AS1	Q5T5F5	129 aa		7.78	□□□□□ -1.16
SNHG17-208	ENST00000456953	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	7.78	□□□□□ -1.16
SNHG17-208	ENST00000456953	TP73-AS1	Q9UF72	201 aa		7.78	□□□□□ -1.16
SNHG17-208	ENST00000456953	NPC2	P61916	151 aa		7.77	□□□□□ -1.17
SNHG17-208	ENST00000456953	C12orf57	Q99622	126 aa		7.77	□□□□□ -1.17
SNHG17-208	ENST00000456953	LITAF	Q99732	161 aa		7.77	□□□□□ -1.17
SNHG17-208	ENST00000456953	UBE2B	P63146	152 aa		7.76	□□□□□ -1.17
SNHG17-208	ENST00000456953	COPS9	Q8WXC6	57 aa		7.76	□□□□□ -1.17
SNHG17-208	ENST00000456953	RPL24	P83731	157 aa	Known RBP	7.75	□□□□□ -1.17
SNHG17-208	ENST00000456953		Q6ZVH6	145 aa		7.75	□□□□□ -1.17
SNHG17-208	ENST00000456953	SPANXD	Q9BXN6	97 aa		7.75	□□□□□ -1.17
SNHG17-208	ENST00000456953	SPANXC	Q9NY87	97 aa		7.75	□□□□□ -1.17
SNHG17-208	ENST00000456953	UQCR10	Q9UDW1	63 aa		7.75	□□□□□ -1.17
SNHG17-208	ENST00000456953		M0QXV9	152 aa		7.74	□□□□□ -1.17
SNHG17-208	ENST00000456953	LINC00308	Q8TCZ7	52 aa		7.74	□□□□□ -1.17
SNHG17-208	ENST00000456953	CDIP1	Q9H305	208 aa		7.74	□□□□□ -1.17
SNHG17-208	ENST00000456953	PRO1933	Q9H354	126 aa		7.74	□□□□□ -1.17
SNHG17-208	ENST00000456953	ZNF861P	O60384	105 aa		7.73	□□□□□ -1.17
SNHG17-208	ENST00000456953	KRTAP7-1	Q8IUC3	87 aa		7.73	□□□□□ -1.17
SNHG17-208	ENST00000456953	NKAPP1	Q8N9T2	125 aa		7.73	□□□□□ -1.17
SNHG17-208	ENST00000456953	HIST1H4G	Q99525	98 aa		7.73	□□□□□ -1.17
SNHG17-208	ENST00000456953	SPANXB1	Q9NS25	103 aa	Predicted RBP	7.73	□□□□□ -1.17
SNHG17-208	ENST00000456953	IFITM1	P13164	125 aa		7.72	□□□□□ -1.17
SNHG17-208	ENST00000456953	TPRXL	Q17RH7	258 aa		7.72	□□□□□ -1.17
SNHG17-208	ENST00000456953	SOSTDC1	Q6X4U4	206 aa		7.72	□□□□□ -1.17
SNHG17-208	ENST00000456953	LINC00518	Q8N0U6	118 aa		7.72	□□□□□ -1.17
SNHG17-208	ENST00000456953	HIGD1B	Q9P298	99 aa		7.72	□□□□□ -1.17
SNHG17-208	ENST00000456953	LOC107984156	A0A0G2JMH3	177 aa		7.71	□□□□□ -1.18

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