RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 TP73-AS1Q9UF72 201 aa6.05□□□□□ -1.44
PTCHD1-202ENST00000456522 ERG28Q9UKR5 140 aa6.05□□□□□ -1.44
PTCHD1-202ENST00000456522 FAT2Q9NYQ8 4349 aa6.05□□□□□ -1.44
PTCHD1-202ENST00000456522 LOC107984640A0A0U1RRK4 108 aa6.04□□□□□ -1.44
PTCHD1-202ENST00000456522 SEC61BP60468 96 aaKnown RBP6.04□□□□□ -1.44
PTCHD1-202ENST00000456522 RPL18AQ02543 176 aaKnown RBP6.04□□□□□ -1.44
PTCHD1-202ENST00000456522 SCGB1D4Q6XE38 83 aa6.04□□□□□ -1.44
PTCHD1-202ENST00000456522 C12orf57Q99622 126 aa6.04□□□□□ -1.44
PTCHD1-202ENST00000456522 GAGE2BQ13066 116 aa6.03□□□□□ -1.44
PTCHD1-202ENST00000456522 GAGE2EQ4V326 116 aa6.03□□□□□ -1.44
PTCHD1-202ENST00000456522 SLC25A34Q6PIV7 304 aa6.03□□□□□ -1.44
PTCHD1-202ENST00000456522 PRO1933Q9H354 126 aa6.03□□□□□ -1.44
PTCHD1-202ENST00000456522 GAGE2DQ9UEU5 116 aa6.03□□□□□ -1.44
PTCHD1-202ENST00000456522 DNAH11Q96DT5 4516 aa6.03□□□□□ -1.44
PTCHD1-202ENST00000456522 HECTD4Q9Y4D8 3996 aa6.02□□□□□ -1.45
PTCHD1-202ENST00000456522 IGKV2-24A0A0C4DH68 120 aa6.02□□□□□ -1.45
PTCHD1-202ENST00000456522 LINC00587B1AMM8 73 aa6.02□□□□□ -1.45
PTCHD1-202ENST00000456522 NDUFC2-KCTD14E9PQ53 114 aa6.02□□□□□ -1.45
PTCHD1-202ENST00000456522 CIRBPQ14011 172 aaKnown RBP6.02□□□□□ -1.45
PTCHD1-202ENST00000456522 SDIM1Q6ZPB5 146 aa6.02□□□□□ -1.45
PTCHD1-202ENST00000456522 BOD1L2Q8IYS8 172 aa6.02□□□□□ -1.45
PTCHD1-202ENST00000456522 LINC00518Q8N0U6 118 aa6.02□□□□□ -1.45
PTCHD1-202ENST00000456522 PRR26Q8N8Z3 221 aa6.02□□□□□ -1.45
PTCHD1-202ENST00000456522 DAND5Q8N907 189 aa6.02□□□□□ -1.45
PTCHD1-202ENST00000456522 PKD1P98161 4303 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 A0A096LNI7 61 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 C16orf90A8MZG2 172 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 DLEU1O43261 78 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 TLX1NBP0CAT3 122 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 CHTF8P0CG12 524 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 KRTAP10-1P60331 282 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 COX17Q14061 63 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 ADAMTSL4-AS1Q5T5F5 129 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 GAGE2AQ6NT46 116 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 Q6ZRP5 223 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 MIR7-3HGQ8N6C7 128 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 DPH3Q96FX2 82 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 XAGE1AQ9HD64 81 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 PKIGQ9Y2B9 76 aa6.01□□□□□ -1.45
PTCHD1-202ENST00000456522 TIMM17BO60830 172 aa6□□□□□ -1.45
PTCHD1-202ENST00000456522 NPC2P61916 151 aa6□□□□□ -1.45
PTCHD1-202ENST00000456522 SND1-IT1Q9HBX3 110 aa6□□□□□ -1.45
PTCHD1-202ENST00000456522 TMEM238C9JI98 176 aa5.99□□□□□ -1.45
PTCHD1-202ENST00000456522 VPREB1P12018 145 aa5.99□□□□□ -1.45
PTCHD1-202ENST00000456522 LITAFQ99732 161 aa5.99□□□□□ -1.45
PTCHD1-202ENST00000456522 UQCR10Q9UDW1 63 aa5.99□□□□□ -1.45
PTCHD1-202ENST00000456522 PANO1I0J062 215 aa5.98□□□□□ -1.45
PTCHD1-202ENST00000456522 SRSF9Q13242 221 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTCHD1-202ENST00000456522 C9orf129Q5T035 196 aaKnown RBP5.98□□□□□ -1.45
PTCHD1-202ENST00000456522 C2orf91Q6ZV80 131 aa5.97□□□□□ -1.45
PTCHD1-202ENST00000456522 Q75L30 129 aa5.97□□□□□ -1.45
PTCHD1-202ENST00000456522 MIEN1Q9BRT3 115 aa5.97□□□□□ -1.45
PTCHD1-202ENST00000456522 SPANXDQ9BXN6 97 aa5.97□□□□□ -1.45
PTCHD1-202ENST00000456522 SPANXCQ9NY87 97 aa5.97□□□□□ -1.45
PTCHD1-202ENST00000456522 FAM168BA1KXE4 195 aa5.96□□□□□ -1.46
PTCHD1-202ENST00000456522 TSTD3H0UI37 97 aa5.96□□□□□ -1.46
PTCHD1-202ENST00000456522 HNRNPA3P51991 378 aaKnown RBP5.96□□□□□ -1.46
PTCHD1-202ENST00000456522 SOSTDC1Q6X4U4 206 aa5.96□□□□□ -1.46
PTCHD1-202ENST00000456522 FAM19A5Q7Z5A7 132 aaPredicted RBP5.96□□□□□ -1.46
PTCHD1-202ENST00000456522 LINC00308Q8TCZ7 52 aa5.96□□□□□ -1.46
PTCHD1-202ENST00000456522 SPACA4Q8TDM5 124 aa5.96□□□□□ -1.46
PTCHD1-202ENST00000456522 HIST1H4GQ99525 98 aa5.96□□□□□ -1.46
PTCHD1-202ENST00000456522 SPANXB1Q9NS25 103 aaPredicted RBP5.96□□□□□ -1.46
PTCHD1-202ENST00000456522 HIGD1BQ9P298 99 aa5.96□□□□□ -1.46
PTCHD1-202ENST00000456522 LINC00474Q9P2X8 69 aa5.96□□□□□ -1.46
PTCHD1-202ENST00000456522 DNAH5Q8TE73 4624 aa5.95□□□□□ -1.46
PTCHD1-202ENST00000456522 HAMPP81172 84 aa5.95□□□□□ -1.46
PTCHD1-202ENST00000456522 MUSTN1Q8IVN3 82 aa5.95□□□□□ -1.46
PTCHD1-202ENST00000456522 KRTAP17-1Q9BYP8 105 aa5.95□□□□□ -1.46
PTCHD1-202ENST00000456522 KRTAP4-9Q9BYQ8 210 aa5.95□□□□□ -1.46
PTCHD1-202ENST00000456522 KRTAP4-2Q9BYR5 136 aa5.95□□□□□ -1.46
PTCHD1-202ENST00000456522 A0A087WYN8 130 aa5.94□□□□□ -1.46
PTCHD1-202ENST00000456522 A0A1W2PNN7 141 aa5.94□□□□□ -1.46
PTCHD1-202ENST00000456522 IFITM1P13164 125 aa5.94□□□□□ -1.46
PTCHD1-202ENST00000456522 Q6ZVH6 145 aa5.94□□□□□ -1.46
PTCHD1-202ENST00000456522 PKHD1P08F94 4074 aa5.93□□□□□ -1.46
PTCHD1-202ENST00000456522 PRR3P79522 188 aaKnown RBP5.93□□□□□ -1.46
PTCHD1-202ENST00000456522 Q6ZSA8 131 aa5.93□□□□□ -1.46
PTCHD1-202ENST00000456522 Q8NDZ9 215 aa5.93□□□□□ -1.46
PTCHD1-202ENST00000456522 COPS9Q8WXC6 57 aa5.93□□□□□ -1.46
PTCHD1-202ENST00000456522 LOC107984156A0A0G2JMH3 177 aa5.92□□□□□ -1.46
PTCHD1-202ENST00000456522 NCR3O14931 201 aa5.92□□□□□ -1.46
PTCHD1-202ENST00000456522 RPL24P83731 157 aaKnown RBP5.92□□□□□ -1.46
PTCHD1-202ENST00000456522 UBE2V1Q13404 147 aa5.92□□□□□ -1.46
PTCHD1-202ENST00000456522 KRTAP7-1Q8IUC3 87 aa5.92□□□□□ -1.46
PTCHD1-202ENST00000456522 ARL17AQ8IVW1 177 aa5.92□□□□□ -1.46
PTCHD1-202ENST00000456522 NKAPP1Q8N9T2 125 aa5.92□□□□□ -1.46
PTCHD1-202ENST00000456522 M0QXV9 152 aa5.91□□□□□ -1.46
PTCHD1-202ENST00000456522 CTAG1AP78358 180 aa5.91□□□□□ -1.46
PTCHD1-202ENST00000456522 HSD52Q0P140 79 aa5.91□□□□□ -1.46
PTCHD1-202ENST00000456522 TAL2Q16559 108 aa5.91□□□□□ -1.46
PTCHD1-202ENST00000456522 SCXQ7RTU7 201 aa5.91□□□□□ -1.46
PTCHD1-202ENST00000456522 CIRBP-AS1Q8TBR5 109 aa5.91□□□□□ -1.46
PTCHD1-202ENST00000456522 PLAC8Q9NZF1 115 aa5.91□□□□□ -1.46
PTCHD1-202ENST00000456522 C22orf24Q9Y442 160 aa5.91□□□□□ -1.46
PTCHD1-202ENST00000456522 DYNC1H1Q14204 4646 aaKnown RBP5.91□□□□□ -1.46
PTCHD1-202ENST00000456522 A4D1N5 150 aa5.9□□□□□ -1.46
PTCHD1-202ENST00000456522 PHF5AQ7RTV0 110 aaKnown RBP5.9□□□□□ -1.46
PTCHD1-202ENST00000456522 CEND1Q8N111 149 aa5.9□□□□□ -1.46
PTCHD1-202ENST00000456522 DNAH8Q96JB1 4490 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms