RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 CST9LQ9H4G1 147 aa12.89□□□□□ -0.35
PTPRA-208ENST00000455631 KRTAP19-2Q3LHN2 52 aa12.88□□□□□ -0.35
PTPRA-208ENST00000455631 Q8N377 158 aa12.86□□□□□ -0.35
PTPRA-208ENST00000455631 COX17Q14061 63 aa12.84□□□□□ -0.35
PTPRA-208ENST00000455631 ZNF625Q96I27 306 aaPredicted RBP12.84□□□□□ -0.35
PTPRA-208ENST00000455631 PMVKQ15126 192 aa12.83□□□□□ -0.36
PTPRA-208ENST00000455631 IGLV5-39A0A0G2JS06 123 aa12.82□□□□□ -0.36
PTPRA-208ENST00000455631 RPS29P62273 56 aaKnown RBP12.82□□□□□ -0.36
PTPRA-208ENST00000455631 MOBPQ13875 183 aa12.81□□□□□ -0.36
PTPRA-208ENST00000455631 SLC25A20O43772 301 aa12.8□□□□□ -0.36
PTPRA-208ENST00000455631 LORP23490 312 aaPredicted RBP12.8□□□□□ -0.36
PTPRA-208ENST00000455631 SMCR5Q8TEV8 140 aa12.8□□□□□ -0.36
PTPRA-208ENST00000455631 IGLV9-49A0A0B4J1Y8 123 aa12.79□□□□□ -0.36
PTPRA-208ENST00000455631 KIAA1644Q3SXP7 199 aa12.79□□□□□ -0.36
PTPRA-208ENST00000455631 hCG_2014768A0A024R1R8 64 aa12.78□□□□□ -0.36
PTPRA-208ENST00000455631 LINC01549A6NIU2 74 aa12.78□□□□□ -0.36
PTPRA-208ENST00000455631 KRTAP10-6P60371 365 aaPredicted RBP12.78□□□□□ -0.36
PTPRA-208ENST00000455631 PRYO14603 147 aa12.77□□□□□ -0.37
PTPRA-208ENST00000455631 LINC00483Q53H64 154 aa12.77□□□□□ -0.37
PTPRA-208ENST00000455631 GAGE2AQ6NT46 116 aa12.77□□□□□ -0.37
PTPRA-208ENST00000455631 ANAPC16Q96DE5 110 aa12.77□□□□□ -0.37
PTPRA-208ENST00000455631 MT-ND4LP03901 98 aa12.75□□□□□ -0.37
PTPRA-208ENST00000455631 IGLC3P0DOY3 106 aa12.75□□□□□ -0.37
PTPRA-208ENST00000455631 IGLV8-61A0A075B6I0 122 aa12.74□□□□□ -0.37
PTPRA-208ENST00000455631 ZNF22P17026 224 aaPredicted RBP12.74□□□□□ -0.37
PTPRA-208ENST00000455631 ETDCA0A1B0GVM5 59 aa12.73□□□□□ -0.37
PTPRA-208ENST00000455631 PCOTHQ58A44 107 aa12.73□□□□□ -0.37
PTPRA-208ENST00000455631 LINC00158P58513 81 aa12.72□□□□□ -0.37
PTPRA-208ENST00000455631 SSBP3-AS1Q7Z2R9 100 aa12.72□□□□□ -0.37
PTPRA-208ENST00000455631 SPRR1AP35321 89 aa12.71□□□□□ -0.37
PTPRA-208ENST00000455631 NDUFA6P56556 154 aa12.71□□□□□ -0.37
PTPRA-208ENST00000455631 SFTA2Q6UW10 78 aa12.71□□□□□ -0.37
PTPRA-208ENST00000455631 A0A0U1RRA0 63 aa12.7□□□□□ -0.38
PTPRA-208ENST00000455631 LINC01546A6NGU7 62 aa12.7□□□□□ -0.38
PTPRA-208ENST00000455631 NCR3O14931 201 aa12.69□□□□□ -0.38
PTPRA-208ENST00000455631 KRTAP4-16G5E9R7 235 aaPredicted RBP12.68□□□□□ -0.38
PTPRA-208ENST00000455631 M0R2T5 61 aa12.68□□□□□ -0.38
PTPRA-208ENST00000455631 KCNQ1DNQ9H478 68 aa12.68□□□□□ -0.38
PTPRA-208ENST00000455631 FA2HQ7L5A8 372 aa12.65□□□□□ -0.38
PTPRA-208ENST00000455631 BOD1L2Q8IYS8 172 aa12.65□□□□□ -0.38
PTPRA-208ENST00000455631 SMCO4Q9NRQ5 59 aa12.65□□□□□ -0.38
PTPRA-208ENST00000455631 KRTAP9-7A8MTY7 169 aa12.64□□□□□ -0.39
PTPRA-208ENST00000455631 ERC2-IT1O76042 136 aa12.64□□□□□ -0.39
PTPRA-208ENST00000455631 TMEM170BQ5T4T1 132 aa12.63□□□□□ -0.39
PTPRA-208ENST00000455631 C9orf153Q5TBE3 101 aa12.62□□□□□ -0.39
PTPRA-208ENST00000455631 TRBV10-3A0A0K0K1G6 114 aa12.61□□□□□ -0.39
PTPRA-208ENST00000455631 C11orf86A6NJI1 115 aa12.6□□□□□ -0.39
PTPRA-208ENST00000455631 ATP6V1G1O75348 118 aa12.6□□□□□ -0.39
PTPRA-208ENST00000455631 C9orf92A6NGG3 77 aa12.59□□□□□ -0.39
PTPRA-208ENST00000455631 B5MCH6 92 aa12.59□□□□□ -0.39
PTPRA-208ENST00000455631 S100A12P80511 92 aa12.59□□□□□ -0.39
PTPRA-208ENST00000455631 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.58□□□□□ -0.4
PTPRA-208ENST00000455631 SMIM13P0DJ93 91 aa12.58□□□□□ -0.4
PTPRA-208ENST00000455631 TRAV9-1A0A075B6T8 112 aa12.55□□□□□ -0.4
PTPRA-208ENST00000455631 MEIG1Q5JSS6 88 aa12.55□□□□□ -0.4
PTPRA-208ENST00000455631 MIR7-3HGQ8N6C7 128 aa12.55□□□□□ -0.4
PTPRA-208ENST00000455631 Q9BRP9 147 aa12.55□□□□□ -0.4
PTPRA-208ENST00000455631 A0A096LNJ9 63 aa12.54□□□□□ -0.4
PTPRA-208ENST00000455631 COX6B2Q6YFQ2 88 aa12.53□□□□□ -0.4
PTPRA-208ENST00000455631 BAGE3Q86Y29 109 aa12.53□□□□□ -0.4
PTPRA-208ENST00000455631 Q6ZRX8 168 aa12.51□□□□□ -0.41
PTPRA-208ENST00000455631 LIMD2Q9BT23 127 aa12.49□□□□□ -0.41
PTPRA-208ENST00000455631 HBDP02042 147 aa12.48□□□□□ -0.41
PTPRA-208ENST00000455631 PMCHL1Q16048 86 aa12.48□□□□□ -0.41
PTPRA-208ENST00000455631 DDTP30046 118 aa12.47□□□□□ -0.41
PTPRA-208ENST00000455631 TMEM223A0PJW6 202 aa12.46□□□□□ -0.41
PTPRA-208ENST00000455631 FABP9Q0Z7S8 132 aa12.46□□□□□ -0.41
PTPRA-208ENST00000455631 HRCT1Q6UXD1 115 aa12.46□□□□□ -0.41
PTPRA-208ENST00000455631 FLGP20930 4061 aaPredicted RBP12.45□□□□□ -0.42
PTPRA-208ENST00000455631 CHTOPQ9Y3Y2 248 aaKnown RBP12.45□□□□□ -0.42
PTPRA-208ENST00000455631 IGLV6-57P01721 117 aa12.44□□□□□ -0.42
PTPRA-208ENST00000455631 HERV-K104P63124 156 aa12.43□□□□□ -0.42
PTPRA-208ENST00000455631 URB1-AS1Q96HZ7 61 aa12.43□□□□□ -0.42
PTPRA-208ENST00000455631 S100PP25815 95 aa12.42□□□□□ -0.42
PTPRA-208ENST00000455631 LINC00614P0C842 121 aa12.41□□□□□ -0.42
PTPRA-208ENST00000455631 ST20-AS1Q8NBB2 130 aa12.41□□□□□ -0.42
PTPRA-208ENST00000455631 MAP1LC3CQ9BXW4 147 aa12.41□□□□□ -0.42
PTPRA-208ENST00000455631 LINC00587B1AMM8 73 aa12.4□□□□□ -0.42
PTPRA-208ENST00000455631 JOSD1Q15040 202 aaPredicted RBP12.4□□□□□ -0.42
PTPRA-208ENST00000455631 COX19Q49B96 90 aa12.4□□□□□ -0.42
PTPRA-208ENST00000455631 TRBV10-2A0A0K0K1G8 114 aa12.39□□□□□ -0.43
PTPRA-208ENST00000455631 SEC11CQ9BY50 192 aa12.37□□□□□ -0.43
PTPRA-208ENST00000455631 S100A7L2Q5SY68 101 aa12.36□□□□□ -0.43
PTPRA-208ENST00000455631 C18orf32Q8TCD1 76 aa12.36□□□□□ -0.43
PTPRA-208ENST00000455631 SPANXB1Q9NS25 103 aaPredicted RBP12.35□□□□□ -0.43
PTPRA-208ENST00000455631 TRAV23DV6A0A075B6W5 121 aa12.34□□□□□ -0.43
PTPRA-208ENST00000455631 MYMXA0A1B0GTQ4 84 aa12.34□□□□□ -0.43
PTPRA-208ENST00000455631 RPL37P61927 97 aaKnown RBP12.33□□□□□ -0.44
PTPRA-208ENST00000455631 LOC107984156A0A0G2JMH3 177 aa12.32□□□□□ -0.44
PTPRA-208ENST00000455631 ARL17AQ8IVW1 177 aa12.32□□□□□ -0.44
PTPRA-208ENST00000455631 ZNF73O43830 326 aaPredicted RBP12.3□□□□□ -0.44
PTPRA-208ENST00000455631 MIEN1Q9BRT3 115 aa12.3□□□□□ -0.44
PTPRA-208ENST00000455631 TRAV12-1A0A0B4J245 112 aa12.29□□□□□ -0.44
PTPRA-208ENST00000455631 C5orf52A6NGY3 159 aa12.29□□□□□ -0.44
PTPRA-208ENST00000455631 SLC25A34Q6PIV7 304 aa12.29□□□□□ -0.44
PTPRA-208ENST00000455631 SPRR1BP22528 89 aa12.26□□□□□ -0.45
PTPRA-208ENST00000455631 IFI27L1Q96BM0 104 aa12.26□□□□□ -0.45
PTPRA-208ENST00000455631 SSPOA2VEC9 5147 aa12.25□□□□□ -0.45
PTPRA-208ENST00000455631 H7C2G1 150 aa12.25□□□□□ -0.45
PTPRA-208ENST00000455631 LAMTOR3Q9UHA4 124 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms