RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 Q6ZRU5 148 aa9.13□□□□□ -0.95
CLK3-203ENST00000454830 TMEM126AQ9H061 195 aa9.13□□□□□ -0.95
CLK3-203ENST00000454830 SLPIP03973 132 aa9.13□□□□□ -0.95
CLK3-203ENST00000454830 SIGMAR1Q99720 223 aa9.13□□□□□ -0.95
CLK3-203ENST00000454830 H0YGX0 51 aa9.12□□□□□ -0.95
CLK3-203ENST00000454830 TRACP01848 142 aa9.11□□□□□ -0.95
CLK3-203ENST00000454830 CMYA5Q8N3K9 4069 aa9.11□□□□□ -0.95
CLK3-203ENST00000454830 PPDPFQ9H3Y8 114 aa9.11□□□□□ -0.95
CLK3-203ENST00000454830 C6orf99Q4VX62 202 aa9.11□□□□□ -0.95
CLK3-203ENST00000454830 C15orf56Q8N910 161 aa9.1□□□□□ -0.95
CLK3-203ENST00000454830 DNAH10OSP0CZ25 163 aa9.1□□□□□ -0.95
CLK3-203ENST00000454830 Q8NDZ9 215 aa9.1□□□□□ -0.95
CLK3-203ENST00000454830 SYCNQ0VAF6 134 aa9.09□□□□□ -0.95
CLK3-203ENST00000454830 NDUFC2O95298 119 aa9.09□□□□□ -0.96
CLK3-203ENST00000454830 SNCGO76070 127 aa9.08□□□□□ -0.96
CLK3-203ENST00000454830 KRTAP26-1Q6PEX3 210 aa9.07□□□□□ -0.96
CLK3-203ENST00000454830 CASC10Q5T4H9 136 aa9.07□□□□□ -0.96
CLK3-203ENST00000454830 PSCAO43653 123 aa9.06□□□□□ -0.96
CLK3-203ENST00000454830 RMI2Q96E14 147 aa9.06□□□□□ -0.96
CLK3-203ENST00000454830 USP17L23D6RBM5 183 aa9.06□□□□□ -0.96
CLK3-203ENST00000454830 M0QXV9 152 aa9.06□□□□□ -0.96
CLK3-203ENST00000454830 TRBV10-3A0A0K0K1G6 114 aa9.05□□□□□ -0.96
CLK3-203ENST00000454830 GVQW2A0A096LPI5 108 aaPredicted RBP9.04□□□□□ -0.96
CLK3-203ENST00000454830 C2orf48Q96LS8 159 aa9.04□□□□□ -0.96
CLK3-203ENST00000454830 CDIP1Q9H305 208 aa9.04□□□□□ -0.96
CLK3-203ENST00000454830 ORMDL1Q9P0S3 153 aa9.04□□□□□ -0.96
CLK3-203ENST00000454830 TENM2Q9NT68 2774 aa9.04□□□□□ -0.96
CLK3-203ENST00000454830 NDUFC2-KCTD14E9PQ53 114 aa9.03□□□□□ -0.96
CLK3-203ENST00000454830 MT-ATP8P03928 68 aa9.03□□□□□ -0.96
CLK3-203ENST00000454830 B9D2Q9BPU9 175 aa9.03□□□□□ -0.96
CLK3-203ENST00000454830 GAGE2BQ13066 116 aa9.03□□□□□ -0.96
CLK3-203ENST00000454830 GAGE2AQ6NT46 116 aa9.03□□□□□ -0.96
CLK3-203ENST00000454830 MUC7Q8TAX7 377 aa9.03□□□□□ -0.96
CLK3-203ENST00000454830 XGP55808 180 aa9.02□□□□□ -0.97
CLK3-203ENST00000454830 NKAPP1Q8N9T2 125 aa9.02□□□□□ -0.97
CLK3-203ENST00000454830 Q6ZRP5 223 aa9.01□□□□□ -0.97
CLK3-203ENST00000454830 C14orf132Q9NPU4 83 aa9.01□□□□□ -0.97
CLK3-203ENST00000454830 TRAV23DV6A0A075B6W5 121 aa9□□□□□ -0.97
CLK3-203ENST00000454830 TTC32Q5I0X7 151 aa9□□□□□ -0.97
CLK3-203ENST00000454830 DIRC1Q969H9 104 aa9□□□□□ -0.97
CLK3-203ENST00000454830 Q8N814 137 aa8.99□□□□□ -0.97
CLK3-203ENST00000454830 COL7A1Q02388 2944 aa8.99□□□□□ -0.97
CLK3-203ENST00000454830 INAFM2P0DMQ5 153 aa8.99□□□□□ -0.97
CLK3-203ENST00000454830 HUWE1Q7Z6Z7 4374 aaKnown RBP8.98□□□□□ -0.97
CLK3-203ENST00000454830 DNAH3Q8TD57 4116 aa8.97□□□□□ -0.97
CLK3-203ENST00000454830 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.97□□□□□ -0.97
CLK3-203ENST00000454830 hADV29S1A0JD25 119 aa8.97□□□□□ -0.97
CLK3-203ENST00000454830 M0R378 163 aa8.97□□□□□ -0.97
CLK3-203ENST00000454830 ZNF73O43830 326 aaPredicted RBP8.97□□□□□ -0.97
CLK3-203ENST00000454830 VPREB1P12018 145 aa8.97□□□□□ -0.97
CLK3-203ENST00000454830 LAMTOR3Q9UHA4 124 aa8.97□□□□□ -0.97
CLK3-203ENST00000454830 IGLV6-57P01721 117 aa8.96□□□□□ -0.97
CLK3-203ENST00000454830 C9orf129Q5T035 196 aaKnown RBP8.96□□□□□ -0.97
CLK3-203ENST00000454830 COX7BP24311 80 aa8.95□□□□□ -0.98
CLK3-203ENST00000454830 Q6ZQY7 126 aa8.95□□□□□ -0.98
CLK3-203ENST00000454830 IGKV2-24A0A0C4DH68 120 aa8.95□□□□□ -0.98
CLK3-203ENST00000454830 LINC00575Q6W349 94 aa8.95□□□□□ -0.98
CLK3-203ENST00000454830 LINC01600Q96MT4 127 aa8.95□□□□□ -0.98
CLK3-203ENST00000454830 RPL37AP8A6NKH3 93 aa8.94□□□□□ -0.98
CLK3-203ENST00000454830 UPK3BQ9BT76 320 aa8.94□□□□□ -0.98
CLK3-203ENST00000454830 KRTAP1-5Q9BYS1 174 aa8.94□□□□□ -0.98
CLK3-203ENST00000454830 M0R2N4 97 aa8.94□□□□□ -0.98
CLK3-203ENST00000454830 FAM19A5Q7Z5A7 132 aaPredicted RBP8.94□□□□□ -0.98
CLK3-203ENST00000454830 APLNQ9ULZ1 77 aa8.94□□□□□ -0.98
CLK3-203ENST00000454830 TMEM256-PLSCR3K7ERE1 68 aa8.93□□□□□ -0.98
CLK3-203ENST00000454830 SERTAD4-AS1Q5TG53 156 aa8.93□□□□□ -0.98
CLK3-203ENST00000454830 C22orf24Q9Y442 160 aa8.93□□□□□ -0.98
CLK3-203ENST00000454830 FAM168BA1KXE4 195 aa8.92□□□□□ -0.98
CLK3-203ENST00000454830 A0A1B0GX51 115 aa8.91□□□□□ -0.98
CLK3-203ENST00000454830 NUPR2A6NF83 97 aa8.91□□□□□ -0.98
CLK3-203ENST00000454830 F8WDY8 70 aa8.91□□□□□ -0.98
CLK3-203ENST00000454830 NHLRC4P0CG21 123 aaPredicted RBP8.91□□□□□ -0.98
CLK3-203ENST00000454830 C7orf33Q8WU49 177 aa8.9□□□□□ -0.99
CLK3-203ENST00000454830 DEFB105AQ8NG35 78 aa8.89□□□□□ -0.99
CLK3-203ENST00000454830 LOC107984640A0A0U1RRK4 108 aa8.88□□□□□ -0.99
CLK3-203ENST00000454830 ACYP1P07311 99 aa8.88□□□□□ -0.99
CLK3-203ENST00000454830 DPH3Q96FX2 82 aa8.88□□□□□ -0.99
CLK3-203ENST00000454830 FAM240AA0A1B0GVK7 77 aa8.88□□□□□ -0.99
CLK3-203ENST00000454830 JMJD7-PLA2G4BH0Y9G9 81 aa8.87□□□□□ -0.99
CLK3-203ENST00000454830 SVIPQ8NHG7 77 aa8.87□□□□□ -0.99
CLK3-203ENST00000454830 ETDCA0A1B0GVM5 59 aa8.85□□□□□ -0.99
CLK3-203ENST00000454830 RBM3P98179 157 aaKnown RBP8.85□□□□□ -0.99
CLK3-203ENST00000454830 ELOF1P60002 83 aaKnown RBP8.85□□□□□ -0.99
CLK3-203ENST00000454830 NBDYA0A0U1RRE5 68 aa8.84□□□□□ -0.99
CLK3-203ENST00000454830 SCGB1A1P11684 91 aa8.84□□□□□ -0.99
CLK3-203ENST00000454830 LINC00167Q96N53 147 aa8.84□□□□□ -1
CLK3-203ENST00000454830 DNAH9Q9NYC9 4486 aa8.83□□□□□ -1
CLK3-203ENST00000454830 DSCR8Q96T75 97 aa8.83□□□□□ -1
CLK3-203ENST00000454830 TLX1NBP0CAT3 122 aa8.83□□□□□ -1
CLK3-203ENST00000454830 SMCR5Q8TEV8 140 aa8.83□□□□□ -1
CLK3-203ENST00000454830 IGKV3D-7A0A0C4DH55 119 aa8.82□□□□□ -1
CLK3-203ENST00000454830 UBE2BP63146 152 aa8.82□□□□□ -1
CLK3-203ENST00000454830 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.82□□□□□ -1
CLK3-203ENST00000454830 MRPL55Q7Z7F7 128 aaKnown RBP8.82□□□□□ -1
CLK3-203ENST00000454830 A0A096LNI7 61 aa8.81□□□□□ -1
CLK3-203ENST00000454830 GHRHP01286 108 aa8.81□□□□□ -1
CLK3-203ENST00000454830 LINC00846Q9NV44 126 aa8.81□□□□□ -1
CLK3-203ENST00000454830 C14orf177Q52M58 125 aa8.81□□□□□ -1
CLK3-203ENST00000454830 LINC00643Q86TS7 51 aa8.81□□□□□ -1
CLK3-203ENST00000454830 CHTF8P0CG12 524 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms