RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 F8VRH5 84 aa5.3□□□□□ -1.56
BRCC3-208ENST00000453705 M0QY20 66 aa5.3□□□□□ -1.56
BRCC3-208ENST00000453705 GAS8-AS1O95177 125 aa5.3□□□□□ -1.56
BRCC3-208ENST00000453705 ATXN8Q156A1 80 aa5.3□□□□□ -1.56
BRCC3-208ENST00000453705 SERP2Q8N6R1 65 aa5.3□□□□□ -1.56
BRCC3-208ENST00000453705 UBE2WQ96B02 151 aa5.3□□□□□ -1.56
BRCC3-208ENST00000453705 TMEM141Q96I45 108 aa5.3□□□□□ -1.56
BRCC3-208ENST00000453705 SPINK13Q1W4C9 94 aa5.29□□□□□ -1.56
BRCC3-208ENST00000453705 SDIM1Q6ZPB5 146 aa5.29□□□□□ -1.56
BRCC3-208ENST00000453705 SPTSSBQ8NFR3 76 aa5.29□□□□□ -1.56
BRCC3-208ENST00000453705 AGRNO00468 2067 aa5.29□□□□□ -1.56
BRCC3-208ENST00000453705 TEX49A0A1B0GTD5 131 aa5.29□□□□□ -1.56
BRCC3-208ENST00000453705 A8MU10 97 aa5.29□□□□□ -1.56
BRCC3-208ENST00000453705 ZNF56Q15929 161 aa5.29□□□□□ -1.56
BRCC3-208ENST00000453705 ATP11AUNQ6ZP68 121 aa5.29□□□□□ -1.56
BRCC3-208ENST00000453705 C20orf203Q8NBC4 194 aa5.29□□□□□ -1.56
BRCC3-208ENST00000453705 IGHV3-30P01768 117 aa5.28□□□□□ -1.56
BRCC3-208ENST00000453705 IGHV3-30-5P0DP03 117 aa5.28□□□□□ -1.56
BRCC3-208ENST00000453705 KRTAP10-3P60369 221 aa5.28□□□□□ -1.56
BRCC3-208ENST00000453705 C14orf178Q8N769 122 aaPredicted RBP5.28□□□□□ -1.56
BRCC3-208ENST00000453705 MXRA5Q9NR99 2828 aa5.28□□□□□ -1.56
BRCC3-208ENST00000453705 A8MWP4 228 aa5.28□□□□□ -1.56
BRCC3-208ENST00000453705 HIST1H4AP62805 103 aaKnown RBP5.28□□□□□ -1.56
BRCC3-208ENST00000453705 KRTAP17-1Q9BYP8 105 aa5.28□□□□□ -1.56
BRCC3-208ENST00000453705 IGKV3-7A0A075B6H7 116 aa5.27□□□□□ -1.57
BRCC3-208ENST00000453705 A0A0B4J2C4 111 aa5.27□□□□□ -1.57
BRCC3-208ENST00000453705 IGHV3-33P01772 117 aa5.27□□□□□ -1.57
BRCC3-208ENST00000453705 LINC00643Q86TS7 51 aa5.27□□□□□ -1.57
BRCC3-208ENST00000453705 NSD1Q96L73 2696 aaPredicted RBP5.27□□□□□ -1.57
BRCC3-208ENST00000453705 A0A0J9YY99 117 aa5.27□□□□□ -1.57
BRCC3-208ENST00000453705 IGHV3-53P01767 116 aa5.27□□□□□ -1.57
BRCC3-208ENST00000453705 LINC00612Q8N6U2 182 aa5.27□□□□□ -1.57
BRCC3-208ENST00000453705 TMEM263Q8WUH6 116 aaKnown RBP5.27□□□□□ -1.57
BRCC3-208ENST00000453705 SCGB3A1Q96QR1 104 aa5.27□□□□□ -1.57
BRCC3-208ENST00000453705 TRBV30A0A0K0K1B3 111 aa5.26□□□□□ -1.57
BRCC3-208ENST00000453705 IGIPA6NJ69 53 aa5.26□□□□□ -1.57
BRCC3-208ENST00000453705 ZNF815PA8K554 130 aa5.26□□□□□ -1.57
BRCC3-208ENST00000453705 FAM229BQ4G0N7 80 aa5.26□□□□□ -1.57
BRCC3-208ENST00000453705 RNASE13Q5GAN3 156 aaKnown RBP5.26□□□□□ -1.57
BRCC3-208ENST00000453705 TRBV10-1A0A0K0K1A3 114 aa5.26□□□□□ -1.57
BRCC3-208ENST00000453705 SMIM1B2RUZ4 78 aa5.26□□□□□ -1.57
BRCC3-208ENST00000453705 GIG44P09565 113 aaPredicted RBP5.26□□□□□ -1.57
BRCC3-208ENST00000453705 WFDC9Q8NEX5 89 aa5.26□□□□□ -1.57
BRCC3-208ENST00000453705 C7orf33Q8WU49 177 aa5.26□□□□□ -1.57
BRCC3-208ENST00000453705 RPL39LQ96EH5 51 aaKnown RBP5.26□□□□□ -1.57
BRCC3-208ENST00000453705 TIMM21Q9BVV7 248 aa5.26□□□□□ -1.57
BRCC3-208ENST00000453705 RPL28P46779 137 aaKnown RBP5.25□□□□□ -1.57
BRCC3-208ENST00000453705 IGLV8-61A0A075B6I0 122 aa5.25□□□□□ -1.57
BRCC3-208ENST00000453705 I3L3M4 83 aa5.25□□□□□ -1.57
BRCC3-208ENST00000453705 MGPP08493 103 aa5.25□□□□□ -1.57
BRCC3-208ENST00000453705 KRTAP24-1Q3LI83 254 aa5.25□□□□□ -1.57
BRCC3-208ENST00000453705 C2orf66Q6UXQ4 117 aa5.25□□□□□ -1.57
BRCC3-208ENST00000453705 LINC00269Q8N2A0 174 aa5.25□□□□□ -1.57
BRCC3-208ENST00000453705 C16orf74Q96GX8 76 aa5.25□□□□□ -1.57
BRCC3-208ENST00000453705 NDUFA12Q9UI09 145 aa5.25□□□□□ -1.57
BRCC3-208ENST00000453705 SDHAF1A6NFY7 115 aa5.24□□□□□ -1.57
BRCC3-208ENST00000453705 Q8NBF4 154 aa5.24□□□□□ -1.57
BRCC3-208ENST00000453705 CUBNO60494 3623 aa5.24□□□□□ -1.57
BRCC3-208ENST00000453705 C2orf82Q6UX34 121 aa5.24□□□□□ -1.57
BRCC3-208ENST00000453705 IBA57-AS1B1ANH7 110 aa5.23□□□□□ -1.57
BRCC3-208ENST00000453705 H7C423 109 aa5.23□□□□□ -1.57
BRCC3-208ENST00000453705 C1orf64Q8NEQ6 169 aa5.23□□□□□ -1.57
BRCC3-208ENST00000453705 Q8N814 137 aa5.23□□□□□ -1.57
BRCC3-208ENST00000453705 FBN1P35555 2871 aaKnown RBP5.23□□□□□ -1.57
BRCC3-208ENST00000453705 C1orf134Q5TEV5 83 aa5.22□□□□□ -1.57
BRCC3-208ENST00000453705 CIRBP-AS1Q8TBR5 109 aa5.22□□□□□ -1.57
BRCC3-208ENST00000453705 RMI2Q96E14 147 aa5.22□□□□□ -1.57
BRCC3-208ENST00000453705 AMELXQ99217 191 aa5.22□□□□□ -1.57
BRCC3-208ENST00000453705 TMEM223A0PJW6 202 aa5.22□□□□□ -1.57
BRCC3-208ENST00000453705 C11orf86A6NJI1 115 aa5.22□□□□□ -1.57
BRCC3-208ENST00000453705 C16orf90A8MZG2 172 aa5.22□□□□□ -1.57
BRCC3-208ENST00000453705 SYCNQ0VAF6 134 aa5.22□□□□□ -1.57
BRCC3-208ENST00000453705 IGKV3-20P01619 116 aa5.21□□□□□ -1.57
BRCC3-208ENST00000453705 IGLV4-69A0A075B6H9 119 aa5.21□□□□□ -1.58
BRCC3-208ENST00000453705 ZNF22P17026 224 aaPredicted RBP5.21□□□□□ -1.58
BRCC3-208ENST00000453705 CAMK2N2Q96S95 79 aa5.21□□□□□ -1.58
BRCC3-208ENST00000453705 CASC10Q5T4H9 136 aa5.2□□□□□ -1.58
BRCC3-208ENST00000453705 A0A087X002 238 aa5.2□□□□□ -1.58
BRCC3-208ENST00000453705 TRBV6-4A0A1B0GX49 114 aa5.2□□□□□ -1.58
BRCC3-208ENST00000453705 H7BZZ5 65 aa5.2□□□□□ -1.58
BRCC3-208ENST00000453705 CHCHD7Q9BUK0 85 aa5.2□□□□□ -1.58
BRCC3-208ENST00000453705 TLX1NBP0CAT3 122 aa5.2□□□□□ -1.58
BRCC3-208ENST00000453705 SMCR5Q8TEV8 140 aa5.19□□□□□ -1.58
BRCC3-208ENST00000453705 PKD1L1Q8TDX9 2849 aa5.18□□□□□ -1.58
BRCC3-208ENST00000453705 MGAM2Q2M2H8 2515 aa5.18□□□□□ -1.58
BRCC3-208ENST00000453705 COX6CP09669 75 aa5.18□□□□□ -1.58
BRCC3-208ENST00000453705 TGP01266 2768 aa5.17□□□□□ -1.58
BRCC3-208ENST00000453705 Q1T7F1 81 aa5.17□□□□□ -1.58
BRCC3-208ENST00000453705 FAM74A4Q5TZK3 123 aa5.17□□□□□ -1.58
BRCC3-208ENST00000453705 UBE2D4Q9Y2X8 147 aa5.17□□□□□ -1.58
BRCC3-208ENST00000453705 LECT2O14960 151 aa5.17□□□□□ -1.58
BRCC3-208ENST00000453705 ATP5EP56381 51 aaPredicted RBP5.17□□□□□ -1.58
BRCC3-208ENST00000453705 CRPP02741 224 aa5.16□□□□□ -1.58
BRCC3-208ENST00000453705 ICOSQ9Y6W8 199 aa5.16□□□□□ -1.58
BRCC3-208ENST00000453705 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.16□□□□□ -1.58
BRCC3-208ENST00000453705 ROMO1P60602 79 aa5.16□□□□□ -1.58
BRCC3-208ENST00000453705 RPL36AP83881 106 aaKnown RBP5.16□□□□□ -1.58
BRCC3-208ENST00000453705 MUSTN1Q8IVN3 82 aa5.16□□□□□ -1.58
BRCC3-208ENST00000453705 RPL36ALQ969Q0 106 aaKnown RBP5.16□□□□□ -1.58
BRCC3-208ENST00000453705 DNAH3Q8TD57 4116 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms