RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 HERV-K104P63124 156 aa9.82□□□□□ -0.84
VCX3B-204ENST00000453306 ADAMTSL4-AS1Q5T5F5 129 aa9.82□□□□□ -0.84
VCX3B-204ENST00000453306 LITAFQ99732 161 aa9.82□□□□□ -0.84
VCX3B-204ENST00000453306 SND1-IT1Q9HBX3 110 aa9.82□□□□□ -0.84
VCX3B-204ENST00000453306 TP73-AS1Q9UF72 201 aa9.82□□□□□ -0.84
VCX3B-204ENST00000453306 EIF4EBP3O60516 100 aaPredicted RBP9.81□□□□□ -0.84
VCX3B-204ENST00000453306 AKR1D1P51857 326 aa9.81□□□□□ -0.84
VCX3B-204ENST00000453306 SFTA2Q6UW10 78 aa9.81□□□□□ -0.84
VCX3B-204ENST00000453306 DPH3Q96FX2 82 aa9.81□□□□□ -0.84
VCX3B-204ENST00000453306 LOC105371267A0A1B0GV96 52 aa9.8□□□□□ -0.84
VCX3B-204ENST00000453306 ZNF815PA8K554 130 aa9.8□□□□□ -0.84
VCX3B-204ENST00000453306 LINC00158P58513 81 aa9.8□□□□□ -0.84
VCX3B-204ENST00000453306 COX17Q14061 63 aa9.8□□□□□ -0.84
VCX3B-204ENST00000453306 DAND5Q8N907 189 aa9.8□□□□□ -0.84
VCX3B-204ENST00000453306 LINC00474Q9P2X8 69 aa9.8□□□□□ -0.84
VCX3B-204ENST00000453306 KRTAP10-4P60372 401 aaPredicted RBP9.79□□□□□ -0.84
VCX3B-204ENST00000453306 MIR7-3HGQ8N6C7 128 aa9.79□□□□□ -0.84
VCX3B-204ENST00000453306 RPL37AP61513 92 aaKnown RBP9.78□□□□□ -0.84
VCX3B-204ENST00000453306 MEIG1Q5JSS6 88 aa9.78□□□□□ -0.84
VCX3B-204ENST00000453306 KRTAP11-1Q8IUC1 163 aa9.78□□□□□ -0.84
VCX3B-204ENST00000453306 PKIGQ9Y2B9 76 aa9.78□□□□□ -0.84
VCX3B-204ENST00000453306 SOSTDC1Q6X4U4 206 aa9.77□□□□□ -0.85
VCX3B-204ENST00000453306 PHF5AQ7RTV0 110 aaKnown RBP9.76□□□□□ -0.85
VCX3B-204ENST00000453306 FAM19A5Q7Z5A7 132 aaPredicted RBP9.76□□□□□ -0.85
VCX3B-204ENST00000453306 PLA2G2DQ9UNK4 145 aa9.76□□□□□ -0.85
VCX3B-204ENST00000453306 PAM16Q9Y3D7 125 aa9.76□□□□□ -0.85
VCX3B-204ENST00000453306 UBR4Q5T4S7 5183 aa9.75□□□□□ -0.85
VCX3B-204ENST00000453306 HSBP1L1C9JCN9 74 aa9.75□□□□□ -0.85
VCX3B-204ENST00000453306 VPREB1P12018 145 aa9.74□□□□□ -0.85
VCX3B-204ENST00000453306 PRR3P79522 188 aaKnown RBP9.74□□□□□ -0.85
VCX3B-204ENST00000453306 SPATA45Q537H7 98 aa9.74□□□□□ -0.85
VCX3B-204ENST00000453306 LOC107984156A0A0G2JMH3 177 aa9.73□□□□□ -0.85
VCX3B-204ENST00000453306 TIMM17BO60830 172 aa9.73□□□□□ -0.85
VCX3B-204ENST00000453306 ARL17AQ8IVW1 177 aa9.73□□□□□ -0.85
VCX3B-204ENST00000453306 BOD1L2Q8IYS8 172 aa9.73□□□□□ -0.85
VCX3B-204ENST00000453306 C14orf144Q96I85 54 aa9.73□□□□□ -0.85
VCX3B-204ENST00000453306 VAMP8Q9BV40 100 aa9.73□□□□□ -0.85
VCX3B-204ENST00000453306 C22orf24Q9Y442 160 aa9.73□□□□□ -0.85
VCX3B-204ENST00000453306 LINC00587B1AMM8 73 aa9.72□□□□□ -0.85
VCX3B-204ENST00000453306 COX8AP10176 69 aa9.72□□□□□ -0.85
VCX3B-204ENST00000453306 IGLV5-37A0A075B6J1 123 aa9.71□□□□□ -0.86
VCX3B-204ENST00000453306 NPC2P61916 151 aa9.71□□□□□ -0.86
VCX3B-204ENST00000453306 LRP1Q07954 4544 aaKnown RBP9.71□□□□□ -0.86
VCX3B-204ENST00000453306 M0QXV9 152 aa9.7□□□□□ -0.86
VCX3B-204ENST00000453306 HMCN2Q8NDA2 5059 aa9.69□□□□□ -0.86
VCX3B-204ENST00000453306 LINC00308Q8TCZ7 52 aa9.69□□□□□ -0.86
VCX3B-204ENST00000453306 DLEU1O43261 78 aa9.68□□□□□ -0.86
VCX3B-204ENST00000453306 SCGB1D4Q6XE38 83 aa9.68□□□□□ -0.86
VCX3B-204ENST00000453306 C7orf33Q8WU49 177 aa9.68□□□□□ -0.86
VCX3B-204ENST00000453306 LINC00167Q96N53 147 aa9.68□□□□□ -0.86
VCX3B-204ENST00000453306 FAT3Q8TDW7 4589 aa9.67□□□□□ -0.86
VCX3B-204ENST00000453306 GAGE10A6NGK3 116 aa9.67□□□□□ -0.86
VCX3B-204ENST00000453306 SPANXDQ9BXN6 97 aa9.67□□□□□ -0.86
VCX3B-204ENST00000453306 SPANXCQ9NY87 97 aa9.67□□□□□ -0.86
VCX3B-204ENST00000453306 C2orf91Q6ZV80 131 aa9.66□□□□□ -0.86
VCX3B-204ENST00000453306 MRPL55Q7Z7F7 128 aaKnown RBP9.66□□□□□ -0.86
VCX3B-204ENST00000453306 RPL37AP8A6NKH3 93 aa9.64□□□□□ -0.87
VCX3B-204ENST00000453306 HNRNPA3P51991 378 aaKnown RBP9.64□□□□□ -0.87
VCX3B-204ENST00000453306 MUSTN1Q8IVN3 82 aa9.64□□□□□ -0.87
VCX3B-204ENST00000453306 PSORS1C2Q9UIG4 136 aa9.64□□□□□ -0.87
VCX3B-204ENST00000453306 IGKV2-28A0A075B6P5 120 aa9.63□□□□□ -0.87
VCX3B-204ENST00000453306 NCR3O14931 201 aa9.63□□□□□ -0.87
VCX3B-204ENST00000453306 IGKV2D-28P01615 120 aa9.63□□□□□ -0.87
VCX3B-204ENST00000453306 RPL24P83731 157 aaKnown RBP9.63□□□□□ -0.87
VCX3B-204ENST00000453306 TMEM238C9JI98 176 aa9.62□□□□□ -0.87
VCX3B-204ENST00000453306 SLC25A34Q6PIV7 304 aa9.62□□□□□ -0.87
VCX3B-204ENST00000453306 SPANXB1Q9NS25 103 aaPredicted RBP9.62□□□□□ -0.87
VCX3B-204ENST00000453306 IGLV1-50A0A075B6I6 118 aa9.61□□□□□ -0.87
VCX3B-204ENST00000453306 M0R378 163 aa9.61□□□□□ -0.87
VCX3B-204ENST00000453306 SMIM6P0DI80 62 aa9.61□□□□□ -0.87
VCX3B-204ENST00000453306 LBHQ53QV2 105 aaPredicted RBP9.61□□□□□ -0.87
VCX3B-204ENST00000453306 NKAPP1Q8N9T2 125 aa9.61□□□□□ -0.87
VCX3B-204ENST00000453306 NDUFC2O95298 119 aa9.6□□□□□ -0.87
VCX3B-204ENST00000453306 PKHD1L1Q86WI1 4243 aa9.59□□□□□ -0.87
VCX3B-204ENST00000453306 IFITM1P13164 125 aa9.59□□□□□ -0.87
VCX3B-204ENST00000453306 Q6ZVH6 145 aa9.59□□□□□ -0.87
VCX3B-204ENST00000453306 PRO1933Q9H354 126 aa9.59□□□□□ -0.87
VCX3B-204ENST00000453306 HIGD1BQ9P298 99 aa9.59□□□□□ -0.87
VCX3B-204ENST00000453306 MT1HL1P0DM35 61 aa9.58□□□□□ -0.88
VCX3B-204ENST00000453306 UBE2BP63146 152 aa9.58□□□□□ -0.88
VCX3B-204ENST00000453306 MIEN1Q9BRT3 115 aa9.58□□□□□ -0.88
VCX3B-204ENST00000453306 PPDPFQ9H3Y8 114 aa9.58□□□□□ -0.88
VCX3B-204ENST00000453306 TRBV10-3A0A0K0K1G6 114 aa9.57□□□□□ -0.88
VCX3B-204ENST00000453306 TRBV10-2A0A0K0K1G8 114 aa9.57□□□□□ -0.88
VCX3B-204ENST00000453306 S100A12P80511 92 aa9.57□□□□□ -0.88
VCX3B-204ENST00000453306 SRSF9Q13242 221 aaKnown RBP eCLIP9.57□□□□□ -0.88
VCX3B-204ENST00000453306 C1orf137Q5JT78 98 aa9.56□□□□□ -0.88
VCX3B-204ENST00000453306 LINC00337Q8N6G1 96 aa9.56□□□□□ -0.88
VCX3B-204ENST00000453306 IGLV6-57P01721 117 aa9.55□□□□□ -0.88
VCX3B-204ENST00000453306 A4D1N5 150 aa9.54□□□□□ -0.88
VCX3B-204ENST00000453306 HIST1H4GQ99525 98 aa9.54□□□□□ -0.88
VCX3B-204ENST00000453306 C12orf57Q99622 126 aa9.54□□□□□ -0.88
VCX3B-204ENST00000453306 LINC00518Q8N0U6 118 aa9.53□□□□□ -0.88
VCX3B-204ENST00000453306 KCNQ1DNQ9H478 68 aa9.53□□□□□ -0.88
VCX3B-204ENST00000453306 UQCR10Q9UDW1 63 aa9.53□□□□□ -0.88
VCX3B-204ENST00000453306 KRTAP4-16G5E9R7 235 aaPredicted RBP9.52□□□□□ -0.89
VCX3B-204ENST00000453306 IGLV7-43P04211 117 aa9.52□□□□□ -0.89
VCX3B-204ENST00000453306 DDTP30046 118 aa9.52□□□□□ -0.89
VCX3B-204ENST00000453306 KRTAP13-1Q8IUC0 172 aa9.52□□□□□ -0.89
VCX3B-204ENST00000453306 TMEM126AQ9H061 195 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms