RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 LBHQ53QV2 105 aaPredicted RBP8.72□□□□□ -1.01
GTF3C3-206ENST00000448539 SERTAD4-AS1Q5TG53 156 aa8.72□□□□□ -1.01
GTF3C3-206ENST00000448539 A0A0U1RRA0 63 aa8.71□□□□□ -1.02
GTF3C3-206ENST00000448539 KRTAP7-1Q8IUC3 87 aa8.71□□□□□ -1.02
GTF3C3-206ENST00000448539 SND1-IT1Q9HBX3 110 aa8.71□□□□□ -1.02
GTF3C3-206ENST00000448539 C22orf24Q9Y442 160 aa8.71□□□□□ -1.02
GTF3C3-206ENST00000448539 NMUP48645 174 aa8.7□□□□□ -1.02
GTF3C3-206ENST00000448539 TSPEAR-AS2P59090 65 aa8.7□□□□□ -1.02
GTF3C3-206ENST00000448539 NKAPP1Q8N9T2 125 aa8.7□□□□□ -1.02
GTF3C3-206ENST00000448539 PLA2G2DQ9UNK4 145 aa8.7□□□□□ -1.02
GTF3C3-206ENST00000448539 DMBT1Q9UGM3 2413 aaPredicted RBP8.69□□□□□ -1.02
GTF3C3-206ENST00000448539 E9PLD3 99 aa8.69□□□□□ -1.02
GTF3C3-206ENST00000448539 SMIM13P0DJ93 91 aa8.69□□□□□ -1.02
GTF3C3-206ENST00000448539 AKR1D1P51857 326 aa8.69□□□□□ -1.02
GTF3C3-206ENST00000448539 HIST3H2BBQ8N257 126 aa8.69□□□□□ -1.02
GTF3C3-206ENST00000448539 TP73-AS1Q9UF72 201 aa8.69□□□□□ -1.02
GTF3C3-206ENST00000448539 PSORS1C2Q9UIG4 136 aa8.69□□□□□ -1.02
GTF3C3-206ENST00000448539 HNRNPA3P51991 378 aaKnown RBP8.68□□□□□ -1.02
GTF3C3-206ENST00000448539 RPL24P83731 157 aaKnown RBP8.68□□□□□ -1.02
GTF3C3-206ENST00000448539 C1orf137Q5JT78 98 aa8.68□□□□□ -1.02
GTF3C3-206ENST00000448539 LCE2CQ5TA81 110 aa8.68□□□□□ -1.02
GTF3C3-206ENST00000448539 MRPL55Q7Z7F7 128 aaKnown RBP8.68□□□□□ -1.02
GTF3C3-206ENST00000448539 HIST1H2BLQ99880 126 aa8.67□□□□□ -1.02
GTF3C3-206ENST00000448539 IGLV5-37A0A075B6J1 123 aa8.66□□□□□ -1.02
GTF3C3-206ENST00000448539 SNRPEP62304 92 aaKnown RBP8.66□□□□□ -1.02
GTF3C3-206ENST00000448539 MIR7-3HGQ8N6C7 128 aa8.66□□□□□ -1.02
GTF3C3-206ENST00000448539 FLG2Q5D862 2391 aaPredicted RBP8.66□□□□□ -1.02
GTF3C3-206ENST00000448539 GAGE10A6NGK3 116 aa8.64□□□□□ -1.03
GTF3C3-206ENST00000448539 SPINK6Q6UWN8 80 aa8.64□□□□□ -1.03
GTF3C3-206ENST00000448539 KRTAP11-1Q8IUC1 163 aa8.64□□□□□ -1.03
GTF3C3-206ENST00000448539 LINC00167Q96N53 147 aa8.64□□□□□ -1.03
GTF3C3-206ENST00000448539 RPL37AP8A6NKH3 93 aa8.63□□□□□ -1.03
GTF3C3-206ENST00000448539 VPREB1P12018 145 aa8.63□□□□□ -1.03
GTF3C3-206ENST00000448539 ATOH7Q8N100 152 aa8.63□□□□□ -1.03
GTF3C3-206ENST00000448539 OXTP01178 125 aa8.62□□□□□ -1.03
GTF3C3-206ENST00000448539 IGLV7-43P04211 117 aa8.62□□□□□ -1.03
GTF3C3-206ENST00000448539 BOD1L2Q8IYS8 172 aa8.62□□□□□ -1.03
GTF3C3-206ENST00000448539 A0A0J9YXY3 114 aa8.61□□□□□ -1.03
GTF3C3-206ENST00000448539 C5orf52A6NGY3 159 aa8.61□□□□□ -1.03
GTF3C3-206ENST00000448539 ZNF815PA8K554 130 aa8.61□□□□□ -1.03
GTF3C3-206ENST00000448539 KRTAP29-1A8MX34 341 aaPredicted RBP8.61□□□□□ -1.03
GTF3C3-206ENST00000448539 DAND5Q8N907 189 aa8.61□□□□□ -1.03
GTF3C3-206ENST00000448539 MIEN1Q9BRT3 115 aa8.61□□□□□ -1.03
GTF3C3-206ENST00000448539 IGKV2D-26A0A0A0MRZ7 120 aa8.6□□□□□ -1.03
GTF3C3-206ENST00000448539 SRSF9Q13242 221 aaKnown RBP eCLIP8.6□□□□□ -1.03
GTF3C3-206ENST00000448539 REG3GQ6UW15 175 aa8.6□□□□□ -1.03
GTF3C3-206ENST00000448539 IGKV2-28A0A075B6P5 120 aa8.59□□□□□ -1.03
GTF3C3-206ENST00000448539 HSBP1L1C9JCN9 74 aa8.59□□□□□ -1.03
GTF3C3-206ENST00000448539 IGKV2D-28P01615 120 aa8.59□□□□□ -1.03
GTF3C3-206ENST00000448539 LRP1Q07954 4544 aaKnown RBP8.58□□□□□ -1.04
GTF3C3-206ENST00000448539 M0R378 163 aa8.58□□□□□ -1.04
GTF3C3-206ENST00000448539 Q8NDZ9 215 aa8.58□□□□□ -1.04
GTF3C3-206ENST00000448539 DIRC1Q969H9 104 aa8.58□□□□□ -1.04
GTF3C3-206ENST00000448539 IGLV1-50A0A075B6I6 118 aa8.57□□□□□ -1.04
GTF3C3-206ENST00000448539 NCR3O14931 201 aa8.57□□□□□ -1.04
GTF3C3-206ENST00000448539 BCE1O60756 84 aa8.57□□□□□ -1.04
GTF3C3-206ENST00000448539 SCGB1D1O95968 90 aa8.57□□□□□ -1.04
GTF3C3-206ENST00000448539 ANKRD39Q53RE8 183 aa8.57□□□□□ -1.04
GTF3C3-206ENST00000448539 TTTY13Q9BZ97 58 aa8.57□□□□□ -1.04
GTF3C3-206ENST00000448539 PKHD1L1Q86WI1 4243 aa8.57□□□□□ -1.04
GTF3C3-206ENST00000448539 FAT3Q8TDW7 4589 aa8.56□□□□□ -1.04
GTF3C3-206ENST00000448539 LOC107984156A0A0G2JMH3 177 aa8.56□□□□□ -1.04
GTF3C3-206ENST00000448539 TIMM17BO60830 172 aa8.56□□□□□ -1.04
GTF3C3-206ENST00000448539 SCGB1D4Q6XE38 83 aa8.56□□□□□ -1.04
GTF3C3-206ENST00000448539 ARL17AQ8IVW1 177 aa8.56□□□□□ -1.04
GTF3C3-206ENST00000448539 ZNF861PO60384 105 aa8.55□□□□□ -1.04
GTF3C3-206ENST00000448539 RPL28P46779 137 aaKnown RBP8.55□□□□□ -1.04
GTF3C3-206ENST00000448539 UBE2AP49459 152 aa8.55□□□□□ -1.04
GTF3C3-206ENST00000448539 NPC2P61916 151 aa8.55□□□□□ -1.04
GTF3C3-206ENST00000448539 ADAMTSL4-AS1Q5T5F5 129 aa8.55□□□□□ -1.04
GTF3C3-206ENST00000448539 H0Y9J4 135 aa8.54□□□□□ -1.04
GTF3C3-206ENST00000448539 S100A12P80511 92 aa8.54□□□□□ -1.04
GTF3C3-206ENST00000448539 TMEM126AQ9H061 195 aa8.53□□□□□ -1.04
GTF3C3-206ENST00000448539 TMEM238C9JI98 176 aa8.52□□□□□ -1.05
GTF3C3-206ENST00000448539 NDUFC2O95298 119 aa8.52□□□□□ -1.05
GTF3C3-206ENST00000448539 LITAFQ99732 161 aa8.52□□□□□ -1.05
GTF3C3-206ENST00000448539 SPANXB1Q9NS25 103 aaPredicted RBP8.52□□□□□ -1.05
GTF3C3-206ENST00000448539 TRBV10-2A0A0K0K1G8 114 aa8.51□□□□□ -1.05
GTF3C3-206ENST00000448539 LORP23490 312 aaPredicted RBP8.51□□□□□ -1.05
GTF3C3-206ENST00000448539 FAM19A1Q7Z5A9 133 aa8.51□□□□□ -1.05
GTF3C3-206ENST00000448539 PCP2Q8IVA1 136 aa8.51□□□□□ -1.05
GTF3C3-206ENST00000448539 LINC00308Q8TCZ7 52 aa8.51□□□□□ -1.05
GTF3C3-206ENST00000448539 COPS9Q8WXC6 57 aa8.51□□□□□ -1.05
GTF3C3-206ENST00000448539 LINC01600Q96MT4 127 aa8.51□□□□□ -1.05
GTF3C3-206ENST00000448539 S100A7L2Q5SY68 101 aa8.5□□□□□ -1.05
GTF3C3-206ENST00000448539 SOSTDC1Q6X4U4 206 aa8.5□□□□□ -1.05
GTF3C3-206ENST00000448539 TMA7Q9Y2S6 64 aaKnown RBP8.5□□□□□ -1.05
GTF3C3-206ENST00000448539 TRBV10-3A0A0K0K1G6 114 aa8.49□□□□□ -1.05
GTF3C3-206ENST00000448539 PRYO14603 147 aa8.49□□□□□ -1.05
GTF3C3-206ENST00000448539 DDTP30046 118 aa8.49□□□□□ -1.05
GTF3C3-206ENST00000448539 SPANXDQ9BXN6 97 aa8.48□□□□□ -1.05
GTF3C3-206ENST00000448539 KCNQ1DNQ9H478 68 aa8.48□□□□□ -1.05
GTF3C3-206ENST00000448539 SPANXCQ9NY87 97 aa8.48□□□□□ -1.05
GTF3C3-206ENST00000448539 EIF4EBP3O60516 100 aaPredicted RBP8.47□□□□□ -1.05
GTF3C3-206ENST00000448539 Q6ZVH6 145 aa8.47□□□□□ -1.05
GTF3C3-206ENST00000448539 HMCN2Q8NDA2 5059 aa8.47□□□□□ -1.05
GTF3C3-206ENST00000448539 ETDCA0A1B0GVM5 59 aa8.46□□□□□ -1.06
GTF3C3-206ENST00000448539 IFITM1P13164 125 aa8.46□□□□□ -1.06
GTF3C3-206ENST00000448539 PRLHP81277 87 aa8.46□□□□□ -1.06
GTF3C3-206ENST00000448539 CBY1Q9Y3M2 126 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms