RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 ABCA13Q86UQ4 5058 aa7.35□□□□□ -1.23
LINC00408-201ENST00000447784 FAM229AH3BQW9 127 aa7.35□□□□□ -1.23
LINC00408-201ENST00000447784 HAMPP81172 84 aa7.35□□□□□ -1.23
LINC00408-201ENST00000447784 PYY3Q5JQD4 70 aa7.35□□□□□ -1.23
LINC00408-201ENST00000447784 Q5VSD8 79 aa7.35□□□□□ -1.23
LINC00408-201ENST00000447784 PCP2Q8IVA1 136 aa7.35□□□□□ -1.23
LINC00408-201ENST00000447784 TTTY13Q9BZ97 58 aa7.35□□□□□ -1.23
LINC00408-201ENST00000447784 SND1-IT1Q9HBX3 110 aa7.35□□□□□ -1.23
LINC00408-201ENST00000447784 SMR3BP02814 79 aaPredicted RBP7.34□□□□□ -1.23
LINC00408-201ENST00000447784 S100A12P80511 92 aa7.34□□□□□ -1.23
LINC00408-201ENST00000447784 SPATA45Q537H7 98 aa7.34□□□□□ -1.23
LINC00408-201ENST00000447784 C9orf129Q5T035 196 aaKnown RBP7.34□□□□□ -1.23
LINC00408-201ENST00000447784 FAM19A5Q7Z5A7 132 aaPredicted RBP7.34□□□□□ -1.23
LINC00408-201ENST00000447784 MIR7-3HGQ8N6C7 128 aa7.34□□□□□ -1.23
LINC00408-201ENST00000447784 MIEN1Q9BRT3 115 aa7.34□□□□□ -1.23
LINC00408-201ENST00000447784 PLAC8Q9NZF1 115 aa7.34□□□□□ -1.23
LINC00408-201ENST00000447784 TIMM17BO60830 172 aa7.33□□□□□ -1.24
LINC00408-201ENST00000447784 RPL24P83731 157 aaKnown RBP7.33□□□□□ -1.24
LINC00408-201ENST00000447784 A0A1W2PNN7 141 aa7.32□□□□□ -1.24
LINC00408-201ENST00000447784 FAM168BA1KXE4 195 aa7.32□□□□□ -1.24
LINC00408-201ENST00000447784 TMEM238C9JI98 176 aa7.32□□□□□ -1.24
LINC00408-201ENST00000447784 DAND5Q8N907 189 aa7.32□□□□□ -1.24
LINC00408-201ENST00000447784 C7orf33Q8WU49 177 aa7.32□□□□□ -1.24
LINC00408-201ENST00000447784 COX8AP10176 69 aa7.31□□□□□ -1.24
LINC00408-201ENST00000447784 LBHQ53QV2 105 aaPredicted RBP7.31□□□□□ -1.24
LINC00408-201ENST00000447784 NKAPP1Q8N9T2 125 aa7.31□□□□□ -1.24
LINC00408-201ENST00000447784 COPS9Q8WXC6 57 aa7.31□□□□□ -1.24
LINC00408-201ENST00000447784 FAT1Q14517 4588 aa7.3□□□□□ -1.24
LINC00408-201ENST00000447784 M0QXV9 152 aa7.3□□□□□ -1.24
LINC00408-201ENST00000447784 INAFM2P0DMQ5 153 aa7.3□□□□□ -1.24
LINC00408-201ENST00000447784 ADAMTSL4-AS1Q5T5F5 129 aa7.3□□□□□ -1.24
LINC00408-201ENST00000447784 BOD1L2Q8IYS8 172 aa7.3□□□□□ -1.24
LINC00408-201ENST00000447784 C14orf144Q96I85 54 aa7.3□□□□□ -1.24
LINC00408-201ENST00000447784 PLA2G2DQ9UNK4 145 aa7.3□□□□□ -1.24
LINC00408-201ENST00000447784 DNAH8Q96JB1 4490 aa7.3□□□□□ -1.24
LINC00408-201ENST00000447784 DLEU1O43261 78 aa7.29□□□□□ -1.24
LINC00408-201ENST00000447784 SRSF9Q13242 221 aaKnown RBP eCLIP7.29□□□□□ -1.24
LINC00408-201ENST00000447784 SERTAD4-AS1Q5TG53 156 aa7.29□□□□□ -1.24
LINC00408-201ENST00000447784 SLC25A34Q6PIV7 304 aa7.29□□□□□ -1.24
LINC00408-201ENST00000447784 Q6ZVH6 145 aa7.29□□□□□ -1.24
LINC00408-201ENST00000447784 LOC105371267A0A1B0GV96 52 aa7.28□□□□□ -1.24
LINC00408-201ENST00000447784 PLA2G1BP04054 148 aaKnown RBP7.28□□□□□ -1.24
LINC00408-201ENST00000447784 SMIM6P0DI80 62 aa7.28□□□□□ -1.24
LINC00408-201ENST00000447784 NPC2P61916 151 aa7.28□□□□□ -1.24
LINC00408-201ENST00000447784 UBE2BP63146 152 aa7.28□□□□□ -1.24
LINC00408-201ENST00000447784 C22orf24Q9Y442 160 aa7.28□□□□□ -1.24
LINC00408-201ENST00000447784 IFITM1P13164 125 aa7.27□□□□□ -1.25
LINC00408-201ENST00000447784 PHF5AQ7RTV0 110 aaKnown RBP7.27□□□□□ -1.25
LINC00408-201ENST00000447784 MRPL55Q7Z7F7 128 aaKnown RBP7.27□□□□□ -1.25
LINC00408-201ENST00000447784 LINC00308Q8TCZ7 52 aa7.27□□□□□ -1.25
LINC00408-201ENST00000447784 LITAFQ99732 161 aa7.27□□□□□ -1.25
LINC00408-201ENST00000447784 TP73-AS1Q9UF72 201 aa7.27□□□□□ -1.25
LINC00408-201ENST00000447784 IGLV5-37A0A075B6J1 123 aa7.26□□□□□ -1.25
LINC00408-201ENST00000447784 LOC107984156A0A0G2JMH3 177 aa7.26□□□□□ -1.25
LINC00408-201ENST00000447784 GAGE10A6NGK3 116 aa7.26□□□□□ -1.25
LINC00408-201ENST00000447784 VPREB1P12018 145 aa7.26□□□□□ -1.25
LINC00408-201ENST00000447784 ARL17AQ8IVW1 177 aa7.26□□□□□ -1.25
LINC00408-201ENST00000447784 SPANXDQ9BXN6 97 aa7.26□□□□□ -1.25
LINC00408-201ENST00000447784 SPANXCQ9NY87 97 aa7.26□□□□□ -1.25
LINC00408-201ENST00000447784 HIST1H4GQ99525 98 aa7.25□□□□□ -1.25
LINC00408-201ENST00000447784 M0R378 163 aa7.24□□□□□ -1.25
LINC00408-201ENST00000447784 NCR3O14931 201 aa7.24□□□□□ -1.25
LINC00408-201ENST00000447784 NDUFC2O95298 119 aa7.24□□□□□ -1.25
LINC00408-201ENST00000447784 RPL37AP61513 92 aaKnown RBP7.24□□□□□ -1.25
LINC00408-201ENST00000447784 KRTAP7-1Q8IUC3 87 aa7.24□□□□□ -1.25
LINC00408-201ENST00000447784 SPANXB1Q9NS25 103 aaPredicted RBP7.24□□□□□ -1.25
LINC00408-201ENST00000447784 VPS13BQ7Z7G8 4022 aa7.24□□□□□ -1.25
LINC00408-201ENST00000447784 PRR3P79522 188 aaKnown RBP7.23□□□□□ -1.25
LINC00408-201ENST00000447784 SOSTDC1Q6X4U4 206 aa7.23□□□□□ -1.25
LINC00408-201ENST00000447784 MUSTN1Q8IVN3 82 aa7.23□□□□□ -1.25
LINC00408-201ENST00000447784 LINC00167Q96N53 147 aa7.23□□□□□ -1.25
LINC00408-201ENST00000447784 UQCR10Q9UDW1 63 aa7.23□□□□□ -1.25
LINC00408-201ENST00000447784 TRBV10-2A0A0K0K1G8 114 aa7.22□□□□□ -1.25
LINC00408-201ENST00000447784 RPL37AP8A6NKH3 93 aa7.22□□□□□ -1.25
LINC00408-201ENST00000447784 S100A7L2Q5SY68 101 aa7.22□□□□□ -1.25
LINC00408-201ENST00000447784 LINC00518Q8N0U6 118 aa7.22□□□□□ -1.25
LINC00408-201ENST00000447784 PPDPFQ9H3Y8 114 aa7.22□□□□□ -1.25
LINC00408-201ENST00000447784 HIGD1BQ9P298 99 aa7.22□□□□□ -1.25
LINC00408-201ENST00000447784 KRTAP10-4P60372 401 aaPredicted RBP7.21□□□□□ -1.26
LINC00408-201ENST00000447784 Q8NDZ9 215 aa7.21□□□□□ -1.26
LINC00408-201ENST00000447784 IGKV2-28A0A075B6P5 120 aa7.2□□□□□ -1.26
LINC00408-201ENST00000447784 EIF4EBP3O60516 100 aaPredicted RBP7.2□□□□□ -1.26
LINC00408-201ENST00000447784 IGKV2D-28P01615 120 aa7.2□□□□□ -1.26
LINC00408-201ENST00000447784 OR13C6PQ8NH95 151 aa7.2□□□□□ -1.26
LINC00408-201ENST00000447784 C12orf57Q99622 126 aa7.2□□□□□ -1.26
LINC00408-201ENST00000447784 CBY1Q9Y3M2 126 aa7.2□□□□□ -1.26
LINC00408-201ENST00000447784 SRRM2Q9UQ35 2752 aaKnown RBP7.2□□□□□ -1.26
LINC00408-201ENST00000447784 DDTP30046 118 aa7.19□□□□□ -1.26
LINC00408-201ENST00000447784 C1orf137Q5JT78 98 aa7.19□□□□□ -1.26
LINC00408-201ENST00000447784 PSORS1C2Q9UIG4 136 aa7.19□□□□□ -1.26
LINC00408-201ENST00000447784 IGLV1-50A0A075B6I6 118 aa7.18□□□□□ -1.26
LINC00408-201ENST00000447784 HNRNPA3P51991 378 aaKnown RBP7.18□□□□□ -1.26
LINC00408-201ENST00000447784 TAL2Q16559 108 aa7.18□□□□□ -1.26
LINC00408-201ENST00000447784 C2orf91Q6ZV80 131 aa7.18□□□□□ -1.26
LINC00408-201ENST00000447784 PRO1933Q9H354 126 aa7.18□□□□□ -1.26
LINC00408-201ENST00000447784 TRBV10-3A0A0K0K1G6 114 aa7.17□□□□□ -1.26
LINC00408-201ENST00000447784 A6NDN8 102 aa7.17□□□□□ -1.26
LINC00408-201ENST00000447784 TMEM126AQ9H061 195 aa7.17□□□□□ -1.26
LINC00408-201ENST00000447784 TRAV13-2A0A0B4J235 113 aa7.16□□□□□ -1.26
LINC00408-201ENST00000447784 A4D1N5 150 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms