RNA–Protein interactions for RNA: ENST00000446996.5

APOE-204, Transcript of apolipoprotein E, humanhuman

TSL 2

Gene APOE, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-204ENST00000446996 SND1-IT1Q9HBX3 110 aa13.64□□□□□ -0.23
APOE-204ENST00000446996 C22orf24Q9Y442 160 aa13.64□□□□□ -0.23
APOE-204ENST00000446996 MYCBP2O75592 4640 aa13.63□□□□□ -0.23
APOE-204ENST00000446996 SNRPEP62304 92 aaKnown RBP13.62□□□□□ -0.23
APOE-204ENST00000446996 MEIG1Q5JSS6 88 aa13.62□□□□□ -0.23
APOE-204ENST00000446996 C5orf52A6NGY3 159 aa13.61□□□□□ -0.23
APOE-204ENST00000446996 SMIM13P0DJ93 91 aa13.6□□□□□ -0.23
APOE-204ENST00000446996 PSORS1C2Q9UIG4 136 aa13.6□□□□□ -0.23
APOE-204ENST00000446996 RPL24P83731 157 aaKnown RBP13.59□□□□□ -0.23
APOE-204ENST00000446996 PKHD1L1Q86WI1 4243 aa13.58□□□□□ -0.24
APOE-204ENST00000446996 UBE2BP63146 152 aa13.58□□□□□ -0.24
APOE-204ENST00000446996 MRPL55Q7Z7F7 128 aaKnown RBP13.58□□□□□ -0.24
APOE-204ENST00000446996 HNRNPA3P51991 378 aaKnown RBP13.57□□□□□ -0.24
APOE-204ENST00000446996 FLG2Q5D862 2391 aaPredicted RBP13.57□□□□□ -0.24
APOE-204ENST00000446996 A0A0U1RRA0 63 aa13.56□□□□□ -0.24
APOE-204ENST00000446996 MIR7-3HGQ8N6C7 128 aa13.56□□□□□ -0.24
APOE-204ENST00000446996 NKAPP1Q8N9T2 125 aa13.56□□□□□ -0.24
APOE-204ENST00000446996 DMBT1Q9UGM3 2413 aaPredicted RBP13.56□□□□□ -0.24
APOE-204ENST00000446996 VPREB1P12018 145 aa13.55□□□□□ -0.24
APOE-204ENST00000446996 LOC107984156A0A0G2JMH3 177 aa13.54□□□□□ -0.24
APOE-204ENST00000446996 KRTAP11-1Q8IUC1 163 aa13.54□□□□□ -0.24
APOE-204ENST00000446996 ARL17AQ8IVW1 177 aa13.54□□□□□ -0.24
APOE-204ENST00000446996 LINC00167Q96N53 147 aa13.54□□□□□ -0.24
APOE-204ENST00000446996 A0A0J9YXY3 114 aa13.53□□□□□ -0.24
APOE-204ENST00000446996 SRSF9Q13242 221 aaKnown RBP eCLIP13.53□□□□□ -0.24
APOE-204ENST00000446996 C1orf137Q5JT78 98 aa13.53□□□□□ -0.24
APOE-204ENST00000446996 SPINK6Q6UWN8 80 aa13.53□□□□□ -0.24
APOE-204ENST00000446996 IGKV2D-26A0A0A0MRZ7 120 aa13.52□□□□□ -0.25
APOE-204ENST00000446996 KRTAP29-1A8MX34 341 aaPredicted RBP13.49□□□□□ -0.25
APOE-204ENST00000446996 TIMM17BO60830 172 aa13.49□□□□□ -0.25
APOE-204ENST00000446996 OXTP01178 125 aa13.49□□□□□ -0.25
APOE-204ENST00000446996 IGLV7-43P04211 117 aa13.49□□□□□ -0.25
APOE-204ENST00000446996 ATOH7Q8N100 152 aa13.49□□□□□ -0.25
APOE-204ENST00000446996 ZNF815PA8K554 130 aa13.48□□□□□ -0.25
APOE-204ENST00000446996 ANKRD39Q53RE8 183 aa13.48□□□□□ -0.25
APOE-204ENST00000446996 BOD1L2Q8IYS8 172 aa13.47□□□□□ -0.25
APOE-204ENST00000446996 Q8NDZ9 215 aa13.47□□□□□ -0.25
APOE-204ENST00000446996 IGLV1-50A0A075B6I6 118 aa13.45□□□□□ -0.26
APOE-204ENST00000446996 M0R378 163 aa13.45□□□□□ -0.26
APOE-204ENST00000446996 GAGE10A6NGK3 116 aa13.44□□□□□ -0.26
APOE-204ENST00000446996 RPL37AP8A6NKH3 93 aa13.44□□□□□ -0.26
APOE-204ENST00000446996 DAND5Q8N907 189 aa13.44□□□□□ -0.26
APOE-204ENST00000446996 MIEN1Q9BRT3 115 aa13.44□□□□□ -0.26
APOE-204ENST00000446996 HSBP1L1C9JCN9 74 aa13.43□□□□□ -0.26
APOE-204ENST00000446996 ADAMTSL4-AS1Q5T5F5 129 aa13.43□□□□□ -0.26
APOE-204ENST00000446996 LITAFQ99732 161 aa13.43□□□□□ -0.26
APOE-204ENST00000446996 BCE1O60756 84 aa13.42□□□□□ -0.26
APOE-204ENST00000446996 NDUFC2O95298 119 aa13.42□□□□□ -0.26
APOE-204ENST00000446996 TTTY13Q9BZ97 58 aa13.42□□□□□ -0.26
APOE-204ENST00000446996 FAT3Q8TDW7 4589 aa13.41□□□□□ -0.26
APOE-204ENST00000446996 SCGB1D1O95968 90 aa13.41□□□□□ -0.26
APOE-204ENST00000446996 TRBV10-2A0A0K0K1G8 114 aa13.4□□□□□ -0.26
APOE-204ENST00000446996 REG3GQ6UW15 175 aa13.4□□□□□ -0.26
APOE-204ENST00000446996 DIRC1Q969H9 104 aa13.4□□□□□ -0.26
APOE-204ENST00000446996 IGKV2-28A0A075B6P5 120 aa13.39□□□□□ -0.27
APOE-204ENST00000446996 ZNF861PO60384 105 aa13.39□□□□□ -0.27
APOE-204ENST00000446996 IGKV2D-28P01615 120 aa13.39□□□□□ -0.27
APOE-204ENST00000446996 SCGB1D4Q6XE38 83 aa13.38□□□□□ -0.27
APOE-204ENST00000446996 LRP1Q07954 4544 aaKnown RBP13.38□□□□□ -0.27
APOE-204ENST00000446996 TMEM238C9JI98 176 aa13.37□□□□□ -0.27
APOE-204ENST00000446996 SOSTDC1Q6X4U4 206 aa13.37□□□□□ -0.27
APOE-204ENST00000446996 PCP2Q8IVA1 136 aa13.37□□□□□ -0.27
APOE-204ENST00000446996 SPANXB1Q9NS25 103 aaPredicted RBP13.37□□□□□ -0.27
APOE-204ENST00000446996 Q6ZVH6 145 aa13.36□□□□□ -0.27
APOE-204ENST00000446996 LINC00308Q8TCZ7 52 aa13.36□□□□□ -0.27
APOE-204ENST00000446996 SPANXDQ9BXN6 97 aa13.36□□□□□ -0.27
APOE-204ENST00000446996 SPANXCQ9NY87 97 aa13.36□□□□□ -0.27
APOE-204ENST00000446996 H0Y9J4 135 aa13.35□□□□□ -0.27
APOE-204ENST00000446996 J3QL48 77 aa13.35□□□□□ -0.27
APOE-204ENST00000446996 RPL28P46779 137 aaKnown RBP13.35□□□□□ -0.27
APOE-204ENST00000446996 TMEM126AQ9H061 195 aa13.35□□□□□ -0.27
APOE-204ENST00000446996 PPDPFQ9H3Y8 114 aa13.35□□□□□ -0.27
APOE-204ENST00000446996 NCR3O14931 201 aa13.34□□□□□ -0.27
APOE-204ENST00000446996 COPS9Q8WXC6 57 aa13.34□□□□□ -0.27
APOE-204ENST00000446996 PRYO14603 147 aa13.33□□□□□ -0.28
APOE-204ENST00000446996 JOSD1Q15040 202 aaPredicted RBP13.33□□□□□ -0.28
APOE-204ENST00000446996 LINC01600Q96MT4 127 aa13.33□□□□□ -0.28
APOE-204ENST00000446996 KCNQ1DNQ9H478 68 aa13.33□□□□□ -0.28
APOE-204ENST00000446996 EIF4EBP3O60516 100 aaPredicted RBP13.32□□□□□ -0.28
APOE-204ENST00000446996 IFITM1P13164 125 aa13.32□□□□□ -0.28
APOE-204ENST00000446996 NPC2P61916 151 aa13.31□□□□□ -0.28
APOE-204ENST00000446996 S100A12P80511 92 aa13.31□□□□□ -0.28
APOE-204ENST00000446996 KRTAP13-1Q8IUC0 172 aa13.31□□□□□ -0.28
APOE-204ENST00000446996 UBE2AP49459 152 aa13.3□□□□□ -0.28
APOE-204ENST00000446996 TRBV10-3A0A0K0K1G6 114 aa13.29□□□□□ -0.28
APOE-204ENST00000446996 DDTP30046 118 aa13.29□□□□□ -0.28
APOE-204ENST00000446996 SPRR1AP35321 89 aa13.29□□□□□ -0.28
APOE-204ENST00000446996 IGLV6-57P01721 117 aa13.27□□□□□ -0.29
APOE-204ENST00000446996 FAM19A1Q7Z5A9 133 aa13.27□□□□□ -0.29
APOE-204ENST00000446996 LINC00518Q8N0U6 118 aa13.27□□□□□ -0.29
APOE-204ENST00000446996 LINC00337Q8N6G1 96 aa13.27□□□□□ -0.29
APOE-204ENST00000446996 TMA7Q9Y2S6 64 aaKnown RBP13.27□□□□□ -0.29
APOE-204ENST00000446996 CBY1Q9Y3M2 126 aa13.27□□□□□ -0.29
APOE-204ENST00000446996 S100A7L2Q5SY68 101 aa13.26□□□□□ -0.29
APOE-204ENST00000446996 DLEU1O43261 78 aa13.25□□□□□ -0.29
APOE-204ENST00000446996 MT1HL1P0DM35 61 aa13.25□□□□□ -0.29
APOE-204ENST00000446996 COX8AP10176 69 aa13.25□□□□□ -0.29
APOE-204ENST00000446996 KRTAP4-16G5E9R7 235 aaPredicted RBP13.23□□□□□ -0.29
APOE-204ENST00000446996 KRTAP10-8P60410 259 aa13.22□□□□□ -0.29
APOE-204ENST00000446996 KRTAP1-4P0C5Y4 121 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms