RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TRACP01848 142 aa11.59□□□□□ -0.55
SMC6-206ENST00000446852 MUC7Q8TAX7 377 aa11.59□□□□□ -0.55
SMC6-206ENST00000446852 TEX49A0A1B0GTD5 131 aa11.58□□□□□ -0.56
SMC6-206ENST00000446852 CAMK2N2Q96S95 79 aa11.58□□□□□ -0.56
SMC6-206ENST00000446852 NCR3O14931 201 aa11.57□□□□□ -0.56
SMC6-206ENST00000446852 A0A087WYN8 130 aa11.56□□□□□ -0.56
SMC6-206ENST00000446852 Q6ZRU5 148 aa11.56□□□□□ -0.56
SMC6-206ENST00000446852 CSMD3Q7Z407 3707 aa11.55□□□□□ -0.56
SMC6-206ENST00000446852 B9D2Q9BPU9 175 aa11.54□□□□□ -0.56
SMC6-206ENST00000446852 DYNC2H1Q8NCM8 4307 aaKnown RBP11.54□□□□□ -0.56
SMC6-206ENST00000446852 C2orf48Q96LS8 159 aa11.54□□□□□ -0.56
SMC6-206ENST00000446852 XAGE1AQ9HD64 81 aa11.54□□□□□ -0.56
SMC6-206ENST00000446852 H0YGX0 51 aa11.53□□□□□ -0.56
SMC6-206ENST00000446852 TMEM126AQ9H061 195 aa11.53□□□□□ -0.56
SMC6-206ENST00000446852 UPK3BQ9BT76 320 aa11.52□□□□□ -0.56
SMC6-206ENST00000446852 C22orf24Q9Y442 160 aa11.51□□□□□ -0.57
SMC6-206ENST00000446852 CASC10Q5T4H9 136 aa11.5□□□□□ -0.57
SMC6-206ENST00000446852 CDIP1Q9H305 208 aa11.5□□□□□ -0.57
SMC6-206ENST00000446852 TENM2Q9NT68 2774 aa11.5□□□□□ -0.57
SMC6-206ENST00000446852 BAALC-AS2P0C853 105 aa11.5□□□□□ -0.57
SMC6-206ENST00000446852 RPL18AQ02543 176 aaKnown RBP11.5□□□□□ -0.57
SMC6-206ENST00000446852 PRKDCP78527 4128 aaKnown RBP11.49□□□□□ -0.57
SMC6-206ENST00000446852 LECT2O14960 151 aa11.49□□□□□ -0.57
SMC6-206ENST00000446852 S100A7L2Q5SY68 101 aa11.49□□□□□ -0.57
SMC6-206ENST00000446852 DNAH7Q8WXX0 4024 aa11.47□□□□□ -0.57
SMC6-206ENST00000446852 DNHD1Q96M86 4753 aa11.47□□□□□ -0.57
SMC6-206ENST00000446852 NDUFC2-KCTD14E9PQ53 114 aa11.47□□□□□ -0.57
SMC6-206ENST00000446852 DNAL4O96015 105 aa11.47□□□□□ -0.57
SMC6-206ENST00000446852 IGLV6-57P01721 117 aa11.47□□□□□ -0.57
SMC6-206ENST00000446852 SYCNQ0VAF6 134 aa11.47□□□□□ -0.57
SMC6-206ENST00000446852 DNAH10Q8IVF4 4471 aa11.46□□□□□ -0.58
SMC6-206ENST00000446852 F8WDY8 70 aa11.46□□□□□ -0.58
SMC6-206ENST00000446852 C6orf99Q4VX62 202 aa11.46□□□□□ -0.58
SMC6-206ENST00000446852 Q6ZRP5 223 aa11.45□□□□□ -0.58
SMC6-206ENST00000446852 MEGF8Q7Z7M0 2845 aa11.45□□□□□ -0.58
SMC6-206ENST00000446852 USP17L23D6RBM5 183 aa11.45□□□□□ -0.58
SMC6-206ENST00000446852 APLNQ9ULZ1 77 aa11.45□□□□□ -0.58
SMC6-206ENST00000446852 PLECQ15149 4684 aaKnown RBP11.44□□□□□ -0.58
SMC6-206ENST00000446852 GAGE2EQ4V326 116 aa11.44□□□□□ -0.58
SMC6-206ENST00000446852 GAGE2DQ9UEU5 116 aa11.44□□□□□ -0.58
SMC6-206ENST00000446852 SLPIP03973 132 aa11.44□□□□□ -0.58
SMC6-206ENST00000446852 VPREB1P12018 145 aa11.44□□□□□ -0.58
SMC6-206ENST00000446852 SIGMAR1Q99720 223 aa11.44□□□□□ -0.58
SMC6-206ENST00000446852 KRTAP1-5Q9BYS1 174 aa11.44□□□□□ -0.58
SMC6-206ENST00000446852 TRBV10-3A0A0K0K1G6 114 aa11.43□□□□□ -0.58
SMC6-206ENST00000446852 PCP4P48539 62 aa11.43□□□□□ -0.58
SMC6-206ENST00000446852 RMI2Q96E14 147 aa11.43□□□□□ -0.58
SMC6-206ENST00000446852 Q8N814 137 aa11.41□□□□□ -0.58
SMC6-206ENST00000446852 C9orf129Q5T035 196 aaKnown RBP11.4□□□□□ -0.58
SMC6-206ENST00000446852 LINC00167Q96N53 147 aa11.4□□□□□ -0.58
SMC6-206ENST00000446852 XGP55808 180 aa11.4□□□□□ -0.59
SMC6-206ENST00000446852 A0A1B0GX51 115 aa11.38□□□□□ -0.59
SMC6-206ENST00000446852 TRAV23DV6A0A075B6W5 121 aa11.38□□□□□ -0.59
SMC6-206ENST00000446852 UBE2DNLQ8IWF7 75 aa11.38□□□□□ -0.59
SMC6-206ENST00000446852 NHLRC4P0CG21 123 aaPredicted RBP11.37□□□□□ -0.59
SMC6-206ENST00000446852 ORMDL1Q9P0S3 153 aa11.37□□□□□ -0.59
SMC6-206ENST00000446852 STARD9Q9P2P6 4700 aa11.37□□□□□ -0.59
SMC6-206ENST00000446852 MT-ATP8P03928 68 aa11.36□□□□□ -0.59
SMC6-206ENST00000446852 LINC00575Q6W349 94 aa11.36□□□□□ -0.59
SMC6-206ENST00000446852 M0R378 163 aa11.35□□□□□ -0.59
SMC6-206ENST00000446852 TLX1NBP0CAT3 122 aa11.35□□□□□ -0.59
SMC6-206ENST00000446852 C21orf62-AS1Q17RA5 79 aa11.34□□□□□ -0.59
SMC6-206ENST00000446852 FAM240AA0A1B0GVK7 77 aa11.34□□□□□ -0.59
SMC6-206ENST00000446852 ZNF73O43830 326 aaPredicted RBP11.33□□□□□ -0.6
SMC6-206ENST00000446852 SERTAD4-AS1Q5TG53 156 aa11.33□□□□□ -0.6
SMC6-206ENST00000446852 DIRC1Q969H9 104 aa11.33□□□□□ -0.6
SMC6-206ENST00000446852 OBSCN-AS1Q96MR7 158 aa11.32□□□□□ -0.6
SMC6-206ENST00000446852 INAFM2P0DMQ5 153 aa11.32□□□□□ -0.6
SMC6-206ENST00000446852 hADV29S1A0JD25 119 aa11.31□□□□□ -0.6
SMC6-206ENST00000446852 NUPR2A6NF83 97 aa11.31□□□□□ -0.6
SMC6-206ENST00000446852 C14orf132Q9NPU4 83 aa11.3□□□□□ -0.6
SMC6-206ENST00000446852 A0A1B0GV72 72 aa11.29□□□□□ -0.6
SMC6-206ENST00000446852 SNCGO76070 127 aa11.29□□□□□ -0.6
SMC6-206ENST00000446852 FAM168BA1KXE4 195 aa11.28□□□□□ -0.6
SMC6-206ENST00000446852 ELOF1P60002 83 aaKnown RBP11.28□□□□□ -0.6
SMC6-206ENST00000446852 NKAPP1Q8N9T2 125 aa11.28□□□□□ -0.6
SMC6-206ENST00000446852 TMEM256-PLSCR3K7ERE1 68 aa11.27□□□□□ -0.61
SMC6-206ENST00000446852 COX7BP24311 80 aa11.27□□□□□ -0.61
SMC6-206ENST00000446852 C7orf33Q8WU49 177 aa11.27□□□□□ -0.61
SMC6-206ENST00000446852 VPS13DQ5THJ4 4388 aa11.27□□□□□ -0.61
SMC6-206ENST00000446852 PLA2G2DQ9UNK4 145 aa11.27□□□□□ -0.61
SMC6-206ENST00000446852 TRBV7-6A0A0J9YX20 115 aa11.26□□□□□ -0.61
SMC6-206ENST00000446852 PSCAO43653 123 aa11.26□□□□□ -0.61
SMC6-206ENST00000446852 GAGE2BQ13066 116 aa11.26□□□□□ -0.61
SMC6-206ENST00000446852 GAGE2AQ6NT46 116 aa11.26□□□□□ -0.61
SMC6-206ENST00000446852 KRTAP7-1Q8IUC3 87 aa11.26□□□□□ -0.61
SMC6-206ENST00000446852 ACYP1P07311 99 aa11.25□□□□□ -0.61
SMC6-206ENST00000446852 SCGB1A1P11684 91 aa11.25□□□□□ -0.61
SMC6-206ENST00000446852 Q6ZQY7 126 aa11.25□□□□□ -0.61
SMC6-206ENST00000446852 LOC107984640A0A0U1RRK4 108 aa11.24□□□□□ -0.61
SMC6-206ENST00000446852 TTC32Q5I0X7 151 aa11.24□□□□□ -0.61
SMC6-206ENST00000446852 KCNQ1DNQ9H478 68 aa11.23□□□□□ -0.61
SMC6-206ENST00000446852 IGLV5-37A0A075B6J1 123 aa11.23□□□□□ -0.61
SMC6-206ENST00000446852 NBDYA0A0U1RRE5 68 aa11.23□□□□□ -0.61
SMC6-206ENST00000446852 LINC00528Q8N1L1 170 aa11.23□□□□□ -0.61
SMC6-206ENST00000446852 SMCR5Q8TEV8 140 aa11.23□□□□□ -0.61
SMC6-206ENST00000446852 CNBPP62633 177 aaKnown RBP11.21□□□□□ -0.61
SMC6-206ENST00000446852 JMJD7-PLA2G4BH0Y9G9 81 aa11.2□□□□□ -0.62
SMC6-206ENST00000446852 RPL37AP8A6NKH3 93 aa11.19□□□□□ -0.62
SMC6-206ENST00000446852 SDIM1Q6ZPB5 146 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms