RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 GAGE2DQ9UEU5 116 aa3.04□□□□□ -1.92
BRAFP1-201ENST00000445336 MUC5ACP98088 5654 aa3.03□□□□□ -1.92
BRAFP1-201ENST00000445336 J3QQQ9 107 aa3.03□□□□□ -1.92
BRAFP1-201ENST00000445336 OR5AL1P0C617 328 aa3.03□□□□□ -1.92
BRAFP1-201ENST00000445336 AKAIN1P0CW23 69 aa3.03□□□□□ -1.92
BRAFP1-201ENST00000445336 Q6ZVQ6 151 aa3.03□□□□□ -1.92
BRAFP1-201ENST00000445336 COLCA2A8K830 154 aa3.03□□□□□ -1.92
BRAFP1-201ENST00000445336 M0QY20 66 aa3.03□□□□□ -1.92
BRAFP1-201ENST00000445336 SMCPP49901 116 aaPredicted RBP3.03□□□□□ -1.92
BRAFP1-201ENST00000445336 SPINK8P0C7L1 97 aa3.02□□□□□ -1.93
BRAFP1-201ENST00000445336 FABP4P15090 132 aa3.02□□□□□ -1.93
BRAFP1-201ENST00000445336 TAS2R45P59539 299 aa3.02□□□□□ -1.93
BRAFP1-201ENST00000445336 MIC13Q5XKP0 118 aa3.02□□□□□ -1.93
BRAFP1-201ENST00000445336 Q6ZN92 141 aa3.02□□□□□ -1.93
BRAFP1-201ENST00000445336 ATP11AUNQ6ZP68 121 aa3.02□□□□□ -1.93
BRAFP1-201ENST00000445336 IGKV3OR2-268A0A0C4DH90 116 aa3.02□□□□□ -1.93
BRAFP1-201ENST00000445336 CENPWQ5EE01 88 aa3.02□□□□□ -1.93
BRAFP1-201ENST00000445336 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
BRAFP1-201ENST00000445336 BRK1Q8WUW1 75 aa3.02□□□□□ -1.93
BRAFP1-201ENST00000445336 AP1S3Q96PC3 154 aa3.02□□□□□ -1.93
BRAFP1-201ENST00000445336 A0A1B0GX51 115 aa3.01□□□□□ -1.93
BRAFP1-201ENST00000445336 C9orf92A6NGG3 77 aa3.01□□□□□ -1.93
BRAFP1-201ENST00000445336 PFN2P35080 140 aa3.01□□□□□ -1.93
BRAFP1-201ENST00000445336 THAP6Q8TBB0 222 aa3.01□□□□□ -1.93
BRAFP1-201ENST00000445336 MT-ATP8P03928 68 aa3.01□□□□□ -1.93
BRAFP1-201ENST00000445336 NDUFA6P56556 154 aa3.01□□□□□ -1.93
BRAFP1-201ENST00000445336 ZC2HC1BQ5TFG8 222 aa3.01□□□□□ -1.93
BRAFP1-201ENST00000445336 GAGE2AQ6NT46 116 aa3.01□□□□□ -1.93
BRAFP1-201ENST00000445336 ZCCHC13Q8WW36 166 aaKnown RBP3.01□□□□□ -1.93
BRAFP1-201ENST00000445336 TPRKBQ9Y3C4 175 aa3.01□□□□□ -1.93
BRAFP1-201ENST00000445336 SMIM26A0A096LP01 95 aa3□□□□□ -1.93
BRAFP1-201ENST00000445336 M0R381 172 aa3□□□□□ -1.93
BRAFP1-201ENST00000445336 UPK1BO75841 260 aa3□□□□□ -1.93
BRAFP1-201ENST00000445336 IL15RAQ13261 267 aa3□□□□□ -1.93
BRAFP1-201ENST00000445336 ANKRD29Q8N6D5 301 aa3□□□□□ -1.93
BRAFP1-201ENST00000445336 LINC00167Q96N53 147 aa3□□□□□ -1.93
BRAFP1-201ENST00000445336 PYGO1Q9Y3Y4 419 aa3□□□□□ -1.93
BRAFP1-201ENST00000445336 A0A1B0GWB2 263 aa3□□□□□ -1.93
BRAFP1-201ENST00000445336 SIX6O95475 246 aa3□□□□□ -1.93
BRAFP1-201ENST00000445336 APCSP02743 223 aa3□□□□□ -1.93
BRAFP1-201ENST00000445336 PEA15Q15121 130 aa3□□□□□ -1.93
BRAFP1-201ENST00000445336 NAT8Q9UHE5 227 aa3□□□□□ -1.93
BRAFP1-201ENST00000445336 GRIFINA4D1Z8 144 aa2.99□□□□□ -1.93
BRAFP1-201ENST00000445336 UBE2L3P68036 154 aaKnown RBP2.99□□□□□ -1.93
BRAFP1-201ENST00000445336 HIST3H2BBQ8N257 126 aa2.99□□□□□ -1.93
BRAFP1-201ENST00000445336 CDC42SE2Q9NRR3 84 aa2.99□□□□□ -1.93
BRAFP1-201ENST00000445336 ZNF727A8MUV8 499 aa2.99□□□□□ -1.93
BRAFP1-201ENST00000445336 RPS28P62857 69 aaKnown RBP2.99□□□□□ -1.93
BRAFP1-201ENST00000445336 HBG1P69891 147 aa2.99□□□□□ -1.93
BRAFP1-201ENST00000445336 HBG2P69892 147 aa2.99□□□□□ -1.93
BRAFP1-201ENST00000445336 PCP2Q8IVA1 136 aa2.99□□□□□ -1.93
BRAFP1-201ENST00000445336 RPL24P83731 157 aaKnown RBP2.99□□□□□ -1.93
BRAFP1-201ENST00000445336 KRTAP19-8Q3LI54 63 aa2.99□□□□□ -1.93
BRAFP1-201ENST00000445336 TXNL4BQ9NX01 149 aaKnown RBP2.99□□□□□ -1.93
BRAFP1-201ENST00000445336 EIF4EBP3O60516 100 aaPredicted RBP2.98□□□□□ -1.93
BRAFP1-201ENST00000445336 RAB5AP20339 215 aa2.98□□□□□ -1.93
BRAFP1-201ENST00000445336 Q5VV11 94 aa2.98□□□□□ -1.93
BRAFP1-201ENST00000445336 HYLS1Q96M11 299 aa2.98□□□□□ -1.93
BRAFP1-201ENST00000445336 GNG4P50150 75 aa2.98□□□□□ -1.93
BRAFP1-201ENST00000445336 NDUFV3P56181 108 aaKnown RBP2.98□□□□□ -1.93
BRAFP1-201ENST00000445336 HERVK_113P63121 156 aa2.98□□□□□ -1.93
BRAFP1-201ENST00000445336 BORCS7Q96B45 105 aa2.98□□□□□ -1.93
BRAFP1-201ENST00000445336 MIEN1Q9BRT3 115 aa2.98□□□□□ -1.93
BRAFP1-201ENST00000445336 MRPL18Q9H0U6 180 aaKnown RBP2.98□□□□□ -1.93
BRAFP1-201ENST00000445336 MT1BP07438 61 aa2.97□□□□□ -1.93
BRAFP1-201ENST00000445336 RIGQ13278 110 aa2.97□□□□□ -1.93
BRAFP1-201ENST00000445336 PMVKQ15126 192 aa2.97□□□□□ -1.93
BRAFP1-201ENST00000445336 HIST1H2BLQ99880 126 aa2.97□□□□□ -1.93
BRAFP1-201ENST00000445336 ADCYAP1P18509 176 aa2.97□□□□□ -1.93
BRAFP1-201ENST00000445336 HINT1P49773 126 aaPredicted RBP2.97□□□□□ -1.93
BRAFP1-201ENST00000445336 MIR17HGQ75NE6 70 aa2.97□□□□□ -1.93
BRAFP1-201ENST00000445336 K7ERJ3 54 aa2.96□□□□□ -1.94
BRAFP1-201ENST00000445336 CD3DP04234 171 aa2.96□□□□□ -1.94
BRAFP1-201ENST00000445336 UNQ6190/PRO20217Q6UXQ8 127 aa2.96□□□□□ -1.94
BRAFP1-201ENST00000445336 SVBPQ8N300 66 aa2.96□□□□□ -1.94
BRAFP1-201ENST00000445336 SEC11CQ9BY50 192 aa2.96□□□□□ -1.94
BRAFP1-201ENST00000445336 MPLKIPQ8TAP9 179 aa2.96□□□□□ -1.94
BRAFP1-201ENST00000445336 MED9Q9NWA0 146 aa2.96□□□□□ -1.94
BRAFP1-201ENST00000445336 FOXA3P55318 350 aaPredicted RBP2.95□□□□□ -1.94
BRAFP1-201ENST00000445336 KRTAP4-11Q9BYQ6 195 aa2.95□□□□□ -1.94
BRAFP1-201ENST00000445336 BORCS7-ASMTA0A0B4J1R7 106 aa2.95□□□□□ -1.94
BRAFP1-201ENST00000445336 ATP6V0CP27449 155 aa2.95□□□□□ -1.94
BRAFP1-201ENST00000445336 C10orf25Q5T742 122 aa2.95□□□□□ -1.94
BRAFP1-201ENST00000445336 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
BRAFP1-201ENST00000445336 NRACQ8N912 160 aa2.95□□□□□ -1.94
BRAFP1-201ENST00000445336 VAMP8Q9BV40 100 aa2.95□□□□□ -1.94
BRAFP1-201ENST00000445336 NDUFS5O43920 106 aa2.94□□□□□ -1.94
BRAFP1-201ENST00000445336 NDUFC2O95298 119 aa2.94□□□□□ -1.94
BRAFP1-201ENST00000445336 NMUP48645 174 aa2.94□□□□□ -1.94
BRAFP1-201ENST00000445336 SUMO4Q6EEV6 95 aa2.94□□□□□ -1.94
BRAFP1-201ENST00000445336 Q6ZUT4 128 aa2.94□□□□□ -1.94
BRAFP1-201ENST00000445336 DSCR8Q96T75 97 aa2.94□□□□□ -1.94
BRAFP1-201ENST00000445336 TIMM21Q9BVV7 248 aa2.94□□□□□ -1.94
BRAFP1-201ENST00000445336 TAX1BP3O14907 124 aa2.94□□□□□ -1.94
BRAFP1-201ENST00000445336 LINC00313P59037 77 aa2.93□□□□□ -1.94
BRAFP1-201ENST00000445336 KRTAP12-2P59991 146 aa2.93□□□□□ -1.94
BRAFP1-201ENST00000445336 KIAA0087Q14695 138 aa2.93□□□□□ -1.94
BRAFP1-201ENST00000445336 C20orf78Q9BR46 151 aa2.93□□□□□ -1.94
BRAFP1-201ENST00000445336 WDR61Q9GZS3 305 aaKnown RBP2.93□□□□□ -1.94
BRAFP1-201ENST00000445336 IGLV9-49A0A0B4J1Y8 123 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms