RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 PLA2G2DQ9UNK4 145 aa14.75□□□□□ -0.05
C9orf3-207ENST00000445181 SPINK6Q6UWN8 80 aa14.74□□□□□ -0.05
C9orf3-207ENST00000445181 PET117Q6UWS5 81 aa14.74□□□□□ -0.05
C9orf3-207ENST00000445181 NKAPP1Q8N9T2 125 aa14.74□□□□□ -0.05
C9orf3-207ENST00000445181 TP73-AS1Q9UF72 201 aa14.74□□□□□ -0.05
C9orf3-207ENST00000445181 J3QQQ9 107 aa14.72□□□□□ -0.05
C9orf3-207ENST00000445181 LGALS3P17931 250 aaKnown RBP14.72□□□□□ -0.05
C9orf3-207ENST00000445181 TSPEAR-AS2P59090 65 aa14.72□□□□□ -0.05
C9orf3-207ENST00000445181 KRTDAPP60985 99 aa14.72□□□□□ -0.05
C9orf3-207ENST00000445181 C3orf79P0CE67 100 aa14.71□□□□□ -0.05
C9orf3-207ENST00000445181 SMIM13P0DJ93 91 aa14.71□□□□□ -0.05
C9orf3-207ENST00000445181 LINC01545Q5VT33 79 aa14.71□□□□□ -0.05
C9orf3-207ENST00000445181 LINC00587B1AMM8 73 aa14.7□□□□□ -0.06
C9orf3-207ENST00000445181 SRSF9Q13242 221 aaKnown RBP eCLIP14.7□□□□□ -0.06
C9orf3-207ENST00000445181 IGLV5-37A0A075B6J1 123 aa14.69□□□□□ -0.06
C9orf3-207ENST00000445181 GAGE10A6NGK3 116 aa14.69□□□□□ -0.06
C9orf3-207ENST00000445181 IGLV7-43P04211 117 aa14.69□□□□□ -0.06
C9orf3-207ENST00000445181 MT1HL1P0DM35 61 aa14.68□□□□□ -0.06
C9orf3-207ENST00000445181 RPL24P83731 157 aaKnown RBP14.68□□□□□ -0.06
C9orf3-207ENST00000445181 LINC00167Q96N53 147 aa14.68□□□□□ -0.06
C9orf3-207ENST00000445181 RPL37AP8A6NKH3 93 aa14.67□□□□□ -0.06
C9orf3-207ENST00000445181 NMUP48645 174 aa14.67□□□□□ -0.06
C9orf3-207ENST00000445181 REG3GQ6UW15 175 aa14.66□□□□□ -0.06
C9orf3-207ENST00000445181 C20orf202A1L168 122 aa14.65□□□□□ -0.06
C9orf3-207ENST00000445181 E9PLD3 99 aa14.65□□□□□ -0.06
C9orf3-207ENST00000445181 VPREB1P12018 145 aa14.65□□□□□ -0.06
C9orf3-207ENST00000445181 MIR7-3HGQ8N6C7 128 aa14.65□□□□□ -0.06
C9orf3-207ENST00000445181 S100A6P06703 90 aa14.64□□□□□ -0.07
C9orf3-207ENST00000445181 S100A2P29034 98 aa14.63□□□□□ -0.07
C9orf3-207ENST00000445181 DIRC1Q969H9 104 aa14.61□□□□□ -0.07
C9orf3-207ENST00000445181 IGKV2-28A0A075B6P5 120 aa14.6□□□□□ -0.07
C9orf3-207ENST00000445181 IGKV2D-28P01615 120 aa14.6□□□□□ -0.07
C9orf3-207ENST00000445181 HIST3H2BBQ8N257 126 aa14.6□□□□□ -0.07
C9orf3-207ENST00000445181 BOD1L2Q8IYS8 172 aa14.59□□□□□ -0.07
C9orf3-207ENST00000445181 Q8NDZ9 215 aa14.59□□□□□ -0.07
C9orf3-207ENST00000445181 DAND5Q8N907 189 aa14.58□□□□□ -0.08
C9orf3-207ENST00000445181 BCE1O60756 84 aa14.56□□□□□ -0.08
C9orf3-207ENST00000445181 LINC01600Q96MT4 127 aa14.56□□□□□ -0.08
C9orf3-207ENST00000445181 HIST1H2BLQ99880 126 aa14.56□□□□□ -0.08
C9orf3-207ENST00000445181 H0Y9J4 135 aa14.55□□□□□ -0.08
C9orf3-207ENST00000445181 IGLV1-50A0A075B6I6 118 aa14.54□□□□□ -0.08
C9orf3-207ENST00000445181 A0A0J9YXY3 114 aa14.54□□□□□ -0.08
C9orf3-207ENST00000445181 ZNF861PO60384 105 aa14.54□□□□□ -0.08
C9orf3-207ENST00000445181 AKR1D1P51857 326 aa14.54□□□□□ -0.08
C9orf3-207ENST00000445181 ATOH7Q8N100 152 aa14.54□□□□□ -0.08
C9orf3-207ENST00000445181 MIEN1Q9BRT3 115 aa14.54□□□□□ -0.08
C9orf3-207ENST00000445181 M0R378 163 aa14.53□□□□□ -0.08
C9orf3-207ENST00000445181 IGKV2D-26A0A0A0MRZ7 120 aa14.52□□□□□ -0.09
C9orf3-207ENST00000445181 NCR3O14931 201 aa14.52□□□□□ -0.09
C9orf3-207ENST00000445181 RPL28P46779 137 aaKnown RBP14.52□□□□□ -0.09
C9orf3-207ENST00000445181 ZNF815PA8K554 130 aa14.51□□□□□ -0.09
C9orf3-207ENST00000445181 SNRPEP62304 92 aaKnown RBP14.51□□□□□ -0.09
C9orf3-207ENST00000445181 UBE2AP49459 152 aa14.5□□□□□ -0.09
C9orf3-207ENST00000445181 HMCN2Q8NDA2 5059 aa14.49□□□□□ -0.09
C9orf3-207ENST00000445181 TMEM238C9JI98 176 aa14.49□□□□□ -0.09
C9orf3-207ENST00000445181 TTTY13Q9BZ97 58 aa14.48□□□□□ -0.09
C9orf3-207ENST00000445181 TMEM126AQ9H061 195 aa14.48□□□□□ -0.09
C9orf3-207ENST00000445181 NPC2P61916 151 aa14.47□□□□□ -0.09
C9orf3-207ENST00000445181 ADAMTSL4-AS1Q5T5F5 129 aa14.47□□□□□ -0.09
C9orf3-207ENST00000445181 TNXBP22105 4242 aa14.46□□□□□ -0.09
C9orf3-207ENST00000445181 LOC107984156A0A0G2JMH3 177 aa14.46□□□□□ -0.09
C9orf3-207ENST00000445181 ANKRD39Q53RE8 183 aa14.46□□□□□ -0.09
C9orf3-207ENST00000445181 ARL17AQ8IVW1 177 aa14.46□□□□□ -0.09
C9orf3-207ENST00000445181 FAM19A1Q7Z5A9 133 aa14.45□□□□□ -0.1
C9orf3-207ENST00000445181 TIMM17BO60830 172 aa14.43□□□□□ -0.1
C9orf3-207ENST00000445181 KRTAP10-8P60410 259 aa14.43□□□□□ -0.1
C9orf3-207ENST00000445181 C5orf52A6NGY3 159 aa14.42□□□□□ -0.1
C9orf3-207ENST00000445181 SCGB1D4Q6XE38 83 aa14.42□□□□□ -0.1
C9orf3-207ENST00000445181 PRLHP81277 87 aa14.41□□□□□ -0.1
C9orf3-207ENST00000445181 SPANXB1Q9NS25 103 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-207ENST00000445181 S100A12P80511 92 aa14.4□□□□□ -0.1
C9orf3-207ENST00000445181 SOSTDC1Q6X4U4 206 aa14.4□□□□□ -0.1
C9orf3-207ENST00000445181 KRTAP13-1Q8IUC0 172 aa14.4□□□□□ -0.1
C9orf3-207ENST00000445181 LITAFQ99732 161 aa14.4□□□□□ -0.1
C9orf3-207ENST00000445181 TRBV10-3A0A0K0K1G6 114 aa14.39□□□□□ -0.11
C9orf3-207ENST00000445181 TRBV10-2A0A0K0K1G8 114 aa14.39□□□□□ -0.11
C9orf3-207ENST00000445181 HSBP1L1C9JCN9 74 aa14.39□□□□□ -0.11
C9orf3-207ENST00000445181 PRYO14603 147 aa14.39□□□□□ -0.11
C9orf3-207ENST00000445181 NDUFC2O95298 119 aa14.39□□□□□ -0.11
C9orf3-207ENST00000445181 PRR26Q8N8Z3 221 aa14.38□□□□□ -0.11
C9orf3-207ENST00000445181 EIF4EBP3O60516 100 aaPredicted RBP14.37□□□□□ -0.11
C9orf3-207ENST00000445181 SCGB1D1O95968 90 aa14.37□□□□□ -0.11
C9orf3-207ENST00000445181 KRTAP1-4P0C5Y4 121 aa14.37□□□□□ -0.11
C9orf3-207ENST00000445181 DDTP30046 118 aa14.37□□□□□ -0.11
C9orf3-207ENST00000445181 S100A7L2Q5SY68 101 aa14.37□□□□□ -0.11
C9orf3-207ENST00000445181 LINC00308Q8TCZ7 52 aa14.37□□□□□ -0.11
C9orf3-207ENST00000445181 PCP2Q8IVA1 136 aa14.36□□□□□ -0.11
C9orf3-207ENST00000445181 KCNQ1DNQ9H478 68 aa14.36□□□□□ -0.11
C9orf3-207ENST00000445181 SPANXCQ9NY87 97 aa14.33□□□□□ -0.12
C9orf3-207ENST00000445181 ETDCA0A1B0GVM5 59 aa14.32□□□□□ -0.12
C9orf3-207ENST00000445181 HIGD2AQ9BW72 106 aa14.32□□□□□ -0.12
C9orf3-207ENST00000445181 RPL13AP40429 203 aaKnown RBP14.3□□□□□ -0.12
C9orf3-207ENST00000445181 LINC00337Q8N6G1 96 aa14.3□□□□□ -0.12
C9orf3-207ENST00000445181 SPANXDQ9BXN6 97 aa14.3□□□□□ -0.12
C9orf3-207ENST00000445181 SPRR1AP35321 89 aa14.29□□□□□ -0.12
C9orf3-207ENST00000445181 IGLV6-57P01721 117 aa14.28□□□□□ -0.12
C9orf3-207ENST00000445181 COPS9Q8WXC6 57 aa14.28□□□□□ -0.12
C9orf3-207ENST00000445181 OR13C6PQ8NH95 151 aa14.27□□□□□ -0.13
C9orf3-207ENST00000445181 TRAV23DV6A0A075B6W5 121 aa14.26□□□□□ -0.13
C9orf3-207ENST00000445181 Q6ZVH6 145 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 1338.9 ms